BLASTX nr result

ID: Coptis25_contig00034736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034736
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533524.1| hypothetical protein RCOM_1007940 [Ricinus c...   100   1e-19
emb|CAN69476.1| hypothetical protein VITISV_017346 [Vitis vinife...    80   3e-13
ref|XP_002881178.1| hypothetical protein ARALYDRAFT_482077 [Arab...    74   1e-11
ref|NP_180706.2| uncharacterized protein [Arabidopsis thaliana] ...    74   1e-11
ref|XP_002310442.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>ref|XP_002533524.1| hypothetical protein RCOM_1007940 [Ricinus communis]
           gi|223526606|gb|EEF28854.1| hypothetical protein
           RCOM_1007940 [Ricinus communis]
          Length = 366

 Score =  100 bits (250), Expect = 1e-19
 Identities = 61/174 (35%), Positives = 99/174 (56%), Gaps = 8/174 (4%)
 Frame = +1

Query: 4   ESKFSWNSEVLFDCFCMSPRRVGSELGK----CERFSAPKSVILRLQSRKFRDQKEEFSS 171
           E K  W+SE  +  F MSPR+  +ELG     C + +  K  +L++ SRK   ++ +FSS
Sbjct: 191 ECKRDWSSEETWKFFSMSPRKYTTELGMPRKTCSKSAESKFHVLKMDSRKDCRRRLDFSS 250

Query: 172 ----SRSQVPTTFCSKIKHEKKNMRRTSNMPSKLRISVQDSTEKRPLEIRDDLDEPTREN 339
               +   +     S   + KK    +S  PS+LR S + S +  P+E+ DD+ +     
Sbjct: 251 VSIVAVKMLEHKQRSNTNYSKKIKPASSTTPSRLRRSTEHSAKIVPIEMEDDIKQAKNRE 310

Query: 340 IANDVLITDYRELLEDCFLSIKDVPIETLVGLDEFNGHEGVNGNFDENSFSLDE 501
           +A   L   + +LL+D  +S +++PIETL+GL EF+GHEGV+  F+E+ F+LD+
Sbjct: 311 VAVAKLNCIHVDLLQDDIISNEELPIETLLGLGEFDGHEGVDSEFNEDVFTLDD 364


>emb|CAN69476.1| hypothetical protein VITISV_017346 [Vitis vinifera]
           gi|297743765|emb|CBI36648.3| unnamed protein product
           [Vitis vinifera]
          Length = 434

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 57/170 (33%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
 Frame = +1

Query: 4   ESKFSWNSEVLFDCFCMSPRR----VGSELGKCERFSAPKSVILRLQSRKFRDQKEEFSS 171
           E K  W+S   +DCF MSPR+      +  G   R + P  V  RL             +
Sbjct: 283 EQKPDWSSGN-WDCFSMSPRKNSYLTNAASGPHNRKTDPNEVSRRL-----------VFT 330

Query: 172 SRSQVPTTFCSKIKHEKKNMRRTSNMPSKLRISVQDSTEKRPLEIRDDLDEPTRENIAND 351
           S S        K +  KK + RTS  PS L    + S E  P +  +++ EPT E + N 
Sbjct: 331 SGSTASKILEWKQRSNKKGVWRTSTTPSSLSKPAKTSEETVPSDSDNNIIEPTEEKVLNQ 390

Query: 352 VLITDYRELLEDCFLSIKDVPIETLVGLDEFNGHEGVNGNFDENSFSLDE 501
           + + +        F S +++PIETL+GLDEF+GHEGV+  F+++ F LD+
Sbjct: 391 IFLEE--------FASNEELPIETLLGLDEFDGHEGVDLEFNKDDFFLDQ 432


>ref|XP_002881178.1| hypothetical protein ARALYDRAFT_482077 [Arabidopsis lyrata subsp.
           lyrata] gi|297327017|gb|EFH57437.1| hypothetical protein
           ARALYDRAFT_482077 [Arabidopsis lyrata subsp. lyrata]
          Length = 472

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 62/196 (31%), Positives = 90/196 (45%), Gaps = 30/196 (15%)
 Frame = +1

Query: 4   ESKFSWNSEVLFDCFCMSPRRVGSELGKCERFSAPKSVILRLQSRKFRDQKE-------- 159
           E KF W  E +   F MSPRR  S LG     ++P+S+  +LQ+RK  D KE        
Sbjct: 277 EQKFDWTPEDILKHFSMSPRRKKS-LGSKIAGTSPRSMRAQLQTRKL-DLKEGCKRKLMF 334

Query: 160 -------------EFSSSRSQVPTTFCSKIKHEKKN-------MRRTSNMPSKLRISVQD 279
                        E + + S      C+K     KN       ++R  ++PS+LR S + 
Sbjct: 335 NGHGSNSKPTRIPELNRTISTSSNNSCTKKTEISKNEQPIRNSVKRNKSLPSRLRKSSKI 394

Query: 280 STEKRPLEIRDDLDEPTRENIANDVLITDY--RELLEDCFLSIKDVPIETLVGLDEFNGH 453
           S++  P+E  D+  E  +E      LI     R  LED F  + D  IE  VGL EF G 
Sbjct: 395 SSKVVPVEAADETVEILKEQKTPKKLIMTRKSRTFLEDDFALMNDFSIEKAVGLCEFRGR 454

Query: 454 EGVNGNFDENSFSLDE 501
           EG++ +F+ + F  D+
Sbjct: 455 EGIDSDFNTDGFLFDD 470


>ref|NP_180706.2| uncharacterized protein [Arabidopsis thaliana]
           gi|67633568|gb|AAY78708.1| unknown [Arabidopsis
           thaliana] gi|330253459|gb|AEC08553.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 472

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 30/196 (15%)
 Frame = +1

Query: 4   ESKFSWNSEVLFDCFCMSPRRVGSELGKCERFSAPKSVILRLQSRKFRDQKE-------- 159
           E KF W  E +   F MSPRR  S LG     ++P+S+  +LQ+RK  D KE        
Sbjct: 277 EQKFDWTPEDILKHFSMSPRRKKS-LGSKIAGTSPRSMRAQLQTRKL-DLKEGCKRKLMF 334

Query: 160 -------------------EFSSSRSQVPTTFCSKIKHEKKN-MRRTSNMPSKLRISVQD 279
                                SS+ S +  T  SK +   +N ++R  ++PS+LR S + 
Sbjct: 335 NGPGSNSKPTRIPELNRTISNSSNNSSMKKTEISKNQQPIRNSVKRNKSLPSRLRKSSKI 394

Query: 280 STEKRPLEIRDDLDEPTRENIANDVLI--TDYRELLEDCFLSIKDVPIETLVGLDEFNGH 453
           S++  P+E  ++  E  +E      LI     R  LED F  + D  IE  VGL EF G 
Sbjct: 395 SSKVVPIEAAEESGEIVKEQKTPKKLIMTRKSRTFLEDDFALMNDFSIEKAVGLCEFKGR 454

Query: 454 EGVNGNFDENSFSLDE 501
           EG++ +F+ + F  D+
Sbjct: 455 EGIDSDFNTDGFLFDD 470


>ref|XP_002310442.1| predicted protein [Populus trichocarpa] gi|222853345|gb|EEE90892.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
 Frame = +1

Query: 4   ESKFSWNSEVLFDCFCMSPRRVGSELGKCERFSAPKSVIL-----RLQSRKFRDQKEEFS 168
           + K  WNSE  + CF MSPR+   +L    +  + KSV +     R+ S+    ++  FS
Sbjct: 315 DKKLDWNSEEDWKCFAMSPRK--DKLSISPQRISSKSVEMKFHDSRVDSKMVCRRRLVFS 372

Query: 169 SSRSQVPTTFCSKIKHEKKNMRRTSNMPSKLRISVQDSTEKRPLEIRDDLDEPTRENIAN 348
           S  +        + +    + ++ ++MPS+L+ SV+D                    I  
Sbjct: 373 SGSAASNIMEKKQRRDNNSSTKKMNSMPSRLKKSVKDG------------------RIPT 414

Query: 349 DVLITDYRELLEDCFLSIKDVPIETLVGLDEFNGHEGVNGNFDENSFSLDE 501
             + +    L +D F S + +PIE L+GLDEF+GHEGV+  F+E  FSLD+
Sbjct: 415 PKVDSGNTNLSQDDFASNRKLPIEILLGLDEFDGHEGVDSEFNEGVFSLDD 465


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