BLASTX nr result

ID: Coptis25_contig00034735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034735
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532729.1| protein binding protein, putative [Ricinus c...   142   4e-32
ref|XP_002272396.2| PREDICTED: exocyst complex component 7-like ...   130   2e-28
emb|CBI35844.3| unnamed protein product [Vitis vinifera]              130   2e-28
ref|XP_002303234.1| predicted protein [Populus trichocarpa] gi|2...   128   8e-28
ref|XP_002331201.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27

>ref|XP_002532729.1| protein binding protein, putative [Ricinus communis]
           gi|223527537|gb|EEF29660.1| protein binding protein,
           putative [Ricinus communis]
          Length = 616

 Score =  142 bits (358), Expect = 4e-32
 Identities = 74/98 (75%), Positives = 85/98 (86%), Gaps = 3/98 (3%)
 Frame = +3

Query: 234 MEPPEV--EFEAAEKIILRWDSTASEEAKEHMIFEGDKLEADRYLRAVDEIQRSMESAAI 407
           MEPPE   +FE AEKIILRWDSTASEEA+E MIFEGD+ E DRYL+A+DE+Q+SM S +I
Sbjct: 1   MEPPEKKSDFEEAEKIILRWDSTASEEAREKMIFEGDRDEVDRYLKAIDELQKSMSSTSI 60

Query: 408 TDDDQHKVNSA-IQIAMARLEDEFRNILLIHTSPLEAD 518
           +DDDQ KVNSA IQIAMARLEDEFRNILL HT+P+E D
Sbjct: 61  SDDDQDKVNSATIQIAMARLEDEFRNILLNHTTPVELD 98


>ref|XP_002272396.2| PREDICTED: exocyst complex component 7-like [Vitis vinifera]
          Length = 611

 Score =  130 bits (327), Expect = 2e-28
 Identities = 68/96 (70%), Positives = 81/96 (84%), Gaps = 1/96 (1%)
 Frame = +3

Query: 234 MEPPE-VEFEAAEKIILRWDSTASEEAKEHMIFEGDKLEADRYLRAVDEIQRSMESAAIT 410
           MEPPE +  +AAEKIILRWDSTASEE ++ +IFEGD+ E D+YL+AVDEIQRSM +A I+
Sbjct: 1   MEPPESITLDAAEKIILRWDSTASEETRDRLIFEGDRREVDQYLQAVDEIQRSMSAATIS 60

Query: 411 DDDQHKVNSAIQIAMARLEDEFRNILLIHTSPLEAD 518
           D D  KVNS IQIAMARLEDEFR+IL+ +TSPLE D
Sbjct: 61  DGD-CKVNSTIQIAMARLEDEFRSILISNTSPLETD 95


>emb|CBI35844.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  130 bits (327), Expect = 2e-28
 Identities = 68/96 (70%), Positives = 81/96 (84%), Gaps = 1/96 (1%)
 Frame = +3

Query: 234 MEPPE-VEFEAAEKIILRWDSTASEEAKEHMIFEGDKLEADRYLRAVDEIQRSMESAAIT 410
           MEPPE +  +AAEKIILRWDSTASEE ++ +IFEGD+ E D+YL+AVDEIQRSM +A I+
Sbjct: 1   MEPPESITLDAAEKIILRWDSTASEETRDRLIFEGDRREVDQYLQAVDEIQRSMSAATIS 60

Query: 411 DDDQHKVNSAIQIAMARLEDEFRNILLIHTSPLEAD 518
           D D  KVNS IQIAMARLEDEFR+IL+ +TSPLE D
Sbjct: 61  DGD-CKVNSTIQIAMARLEDEFRSILISNTSPLETD 95


>ref|XP_002303234.1| predicted protein [Populus trichocarpa] gi|222840666|gb|EEE78213.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score =  128 bits (321), Expect = 8e-28
 Identities = 70/110 (63%), Positives = 82/110 (74%), Gaps = 15/110 (13%)
 Frame = +3

Query: 234 MEPPE---------VEFEAAEKIILRWDSTASEEAKEHMIFEGDKLEADRYLRAVDEIQR 386
           MEPPE         V FE A+KIILRWDSTASEEA+E MIF+GD+ E D YL+AVDEIQ+
Sbjct: 1   MEPPENYSTDTSFAVPFEDAQKIILRWDSTASEEARERMIFDGDRQEVDLYLQAVDEIQK 60

Query: 387 SMESAAIT------DDDQHKVNSAIQIAMARLEDEFRNILLIHTSPLEAD 518
           SM S +I+      D + +KV SAIQIAMARLEDEFRNIL+ HTSP+E D
Sbjct: 61  SMSSTSISSDHHDQDSNDNKVTSAIQIAMARLEDEFRNILINHTSPVELD 110


>ref|XP_002331201.1| predicted protein [Populus trichocarpa] gi|222873322|gb|EEF10453.1|
           predicted protein [Populus trichocarpa]
          Length = 610

 Score =  125 bits (315), Expect = 4e-27
 Identities = 70/113 (61%), Positives = 81/113 (71%), Gaps = 18/113 (15%)
 Frame = +3

Query: 234 MEPPE---------VEFEAAEKIILRWDSTASEEAKEHMIFEGDKLEADRYLRAVDEIQR 386
           MEPPE           FE A+KIILRWDSTASEEA+E MIF GD+ E D YL+AVDEIQ+
Sbjct: 1   MEPPENYSTSTSFAEPFEDAQKIILRWDSTASEEARERMIFGGDRQEVDLYLQAVDEIQK 60

Query: 387 SMESAAIT---------DDDQHKVNSAIQIAMARLEDEFRNILLIHTSPLEAD 518
           SM S +I+         D + +KVNSAIQIAMARLEDEFRNIL+ HTSP+E D
Sbjct: 61  SMSSTSISPPSSHHHDQDSNSNKVNSAIQIAMARLEDEFRNILINHTSPVEVD 113


Top