BLASTX nr result

ID: Coptis25_contig00034725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034725
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20283.3| unnamed protein product [Vitis vinifera]              352   6e-95
ref|XP_002282528.1| PREDICTED: dynamin-like protein C-like [Viti...   352   6e-95
ref|XP_002533903.1| ATP binding protein, putative [Ricinus commu...   347   1e-93
ref|XP_002317496.1| predicted protein [Populus trichocarpa] gi|2...   347   2e-93
ref|XP_003541137.1| PREDICTED: dynamin-like protein C-like [Glyc...   338   7e-91

>emb|CBI20283.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  352 bits (902), Expect = 6e-95
 Identities = 176/239 (73%), Positives = 197/239 (82%)
 Frame = -3

Query: 717  EEKYRPFIGFGRLREYLEEELQKRYKVAAPATLALLEQRCDEISIDLARMDSKIKATSDV 538
            EEK+RPFIGFG LREYLE ELQKRYK AAPATLALLEQRC E++ +LAR+DSKI+ATSDV
Sbjct: 329  EEKFRPFIGFGCLREYLESELQKRYKEAAPATLALLEQRCCEVTTELARLDSKIQATSDV 388

Query: 537  AHLRRSAMLHAASISSHIGSFIDGAADPDPEQWGKTTNEEQSESGVGSWPGVTTDVKPPN 358
            AHLRR AMLH ASIS+H+G  IDGAADP PEQWGKTT EEQSESG+GSWPG+T  +KPPN
Sbjct: 389  AHLRRCAMLHTASISNHVGVLIDGAADPAPEQWGKTTEEEQSESGIGSWPGITAVIKPPN 448

Query: 357  STLKLYGGAAFERVMHEFRCATYSIECPSVSREKVANILLXXXXXXXXXXXXXXXXXXXX 178
            STL+LYGGAAFERV+HEFRCA YSIECP VSREKVANILL                    
Sbjct: 449  STLRLYGGAAFERVIHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGVMEAAAEIAR 508

Query: 177  XXXRSWLAPLLDTACDRLAFVLGNLFDLSVERNRTRDSLNYGTKSADMEGYIGFHASLR 1
               RSWLAPLLDTACDRLAFVLGNLFDL+VER+ +RDS +YG KS +M+GY+GFHA+LR
Sbjct: 509  AAARSWLAPLLDTACDRLAFVLGNLFDLAVERSCSRDS-DYGRKSGNMDGYVGFHAALR 566


>ref|XP_002282528.1| PREDICTED: dynamin-like protein C-like [Vitis vinifera]
          Length = 821

 Score =  352 bits (902), Expect = 6e-95
 Identities = 176/239 (73%), Positives = 197/239 (82%)
 Frame = -3

Query: 717  EEKYRPFIGFGRLREYLEEELQKRYKVAAPATLALLEQRCDEISIDLARMDSKIKATSDV 538
            EEK+RPFIGFG LREYLE ELQKRYK AAPATLALLEQRC E++ +LAR+DSKI+ATSDV
Sbjct: 312  EEKFRPFIGFGCLREYLESELQKRYKEAAPATLALLEQRCCEVTTELARLDSKIQATSDV 371

Query: 537  AHLRRSAMLHAASISSHIGSFIDGAADPDPEQWGKTTNEEQSESGVGSWPGVTTDVKPPN 358
            AHLRR AMLH ASIS+H+G  IDGAADP PEQWGKTT EEQSESG+GSWPG+T  +KPPN
Sbjct: 372  AHLRRCAMLHTASISNHVGVLIDGAADPAPEQWGKTTEEEQSESGIGSWPGITAVIKPPN 431

Query: 357  STLKLYGGAAFERVMHEFRCATYSIECPSVSREKVANILLXXXXXXXXXXXXXXXXXXXX 178
            STL+LYGGAAFERV+HEFRCA YSIECP VSREKVANILL                    
Sbjct: 432  STLRLYGGAAFERVIHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGVMEAAAEIAR 491

Query: 177  XXXRSWLAPLLDTACDRLAFVLGNLFDLSVERNRTRDSLNYGTKSADMEGYIGFHASLR 1
               RSWLAPLLDTACDRLAFVLGNLFDL+VER+ +RDS +YG KS +M+GY+GFHA+LR
Sbjct: 492  AAARSWLAPLLDTACDRLAFVLGNLFDLAVERSCSRDS-DYGRKSGNMDGYVGFHAALR 549


>ref|XP_002533903.1| ATP binding protein, putative [Ricinus communis]
            gi|223526136|gb|EEF28477.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 819

 Score =  347 bits (890), Expect = 1e-93
 Identities = 171/239 (71%), Positives = 196/239 (82%)
 Frame = -3

Query: 717  EEKYRPFIGFGRLREYLEEELQKRYKVAAPATLALLEQRCDEISIDLARMDSKIKATSDV 538
            EEK+RP+IGF  LR+YLE ELQKRYK AAPATLALLE+RC +++ +LA+MDSKI+ATSDV
Sbjct: 307  EEKFRPYIGFSSLRDYLESELQKRYKEAAPATLALLEERCCQVTTELAKMDSKIQATSDV 366

Query: 537  AHLRRSAMLHAASISSHIGSFIDGAADPDPEQWGKTTNEEQSESGVGSWPGVTTDVKPPN 358
            AHLRRSAMLH ASIS+H+G+ IDGAADP PEQWGKTT EEQSESG+GSWPGV  ++KPPN
Sbjct: 367  AHLRRSAMLHTASISNHVGALIDGAADPAPEQWGKTTEEEQSESGIGSWPGVIVNIKPPN 426

Query: 357  STLKLYGGAAFERVMHEFRCATYSIECPSVSREKVANILLXXXXXXXXXXXXXXXXXXXX 178
            +TL+LYGGAAFERV+HEFRCA YSIECP VSREKVANILL                    
Sbjct: 427  ATLRLYGGAAFERVIHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGITEAAAEIAR 486

Query: 177  XXXRSWLAPLLDTACDRLAFVLGNLFDLSVERNRTRDSLNYGTKSADMEGYIGFHASLR 1
               RSWLAPLLDTACDRLAFVLGNLFDL++ERNR RDS  Y  KS +M+GY+GFHA+LR
Sbjct: 487  AAARSWLAPLLDTACDRLAFVLGNLFDLALERNRMRDS-EYAKKSENMDGYVGFHAALR 544


>ref|XP_002317496.1| predicted protein [Populus trichocarpa] gi|222860561|gb|EEE98108.1|
            predicted protein [Populus trichocarpa]
          Length = 760

 Score =  347 bits (889), Expect = 2e-93
 Identities = 173/239 (72%), Positives = 194/239 (81%)
 Frame = -3

Query: 717  EEKYRPFIGFGRLREYLEEELQKRYKVAAPATLALLEQRCDEISIDLARMDSKIKATSDV 538
            EEK+RP+IGF  LR+YLE ELQKRYK AAPATLALLEQRC E++ +L RMDSKI ATSDV
Sbjct: 309  EEKFRPYIGFSTLRDYLESELQKRYKEAAPATLALLEQRCCEVNAELDRMDSKILATSDV 368

Query: 537  AHLRRSAMLHAASISSHIGSFIDGAADPDPEQWGKTTNEEQSESGVGSWPGVTTDVKPPN 358
            AHLRRSAMLHAASIS+H+G+ IDGAADP PEQWGKTT EEQ+ESG+G WPGVT D+KPPN
Sbjct: 369  AHLRRSAMLHAASISNHVGALIDGAADPAPEQWGKTTVEEQAESGIGIWPGVTVDIKPPN 428

Query: 357  STLKLYGGAAFERVMHEFRCATYSIECPSVSREKVANILLXXXXXXXXXXXXXXXXXXXX 178
            +TL+LYGGAAFERVMHEFRCA YSIECP VSREKVANILL                    
Sbjct: 429  ATLRLYGGAAFERVMHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGVTEAAAEIAR 488

Query: 177  XXXRSWLAPLLDTACDRLAFVLGNLFDLSVERNRTRDSLNYGTKSADMEGYIGFHASLR 1
               RSWLAPLLDTACDRLAFVLGNLFDL++ERN  RDS  Y  K+ +M+GY+GFHA+LR
Sbjct: 489  AASRSWLAPLLDTACDRLAFVLGNLFDLALERNHIRDS-EYDKKNGNMDGYVGFHAALR 546


>ref|XP_003541137.1| PREDICTED: dynamin-like protein C-like [Glycine max]
          Length = 804

 Score =  338 bits (867), Expect = 7e-91
 Identities = 167/239 (69%), Positives = 194/239 (81%)
 Frame = -3

Query: 717  EEKYRPFIGFGRLREYLEEELQKRYKVAAPATLALLEQRCDEISIDLARMDSKIKATSDV 538
            EEK++ +IGFGRLR+YLE ELQK+YK AAPATLALLEQRC E++ +LARMDSKI+ATSDV
Sbjct: 306  EEKFKSYIGFGRLRDYLESELQKKYKEAAPATLALLEQRCSELTSELARMDSKIQATSDV 365

Query: 537  AHLRRSAMLHAASISSHIGSFIDGAADPDPEQWGKTTNEEQSESGVGSWPGVTTDVKPPN 358
            +HLR+SAMLHAASIS+H+G+ IDGAADP PE WGKTT EE+S SG+G WPGVT DV PPN
Sbjct: 366  SHLRKSAMLHAASISNHVGALIDGAADPSPELWGKTTVEERSRSGIGVWPGVTADVNPPN 425

Query: 357  STLKLYGGAAFERVMHEFRCATYSIECPSVSREKVANILLXXXXXXXXXXXXXXXXXXXX 178
            +TL+LYGGAAFERVMHEFRCA YSIECPSVSREKVANILL                    
Sbjct: 426  ATLRLYGGAAFERVMHEFRCAAYSIECPSVSREKVANILLAHAGRGGGRGITEAAAEIAR 485

Query: 177  XXXRSWLAPLLDTACDRLAFVLGNLFDLSVERNRTRDSLNYGTKSADMEGYIGFHASLR 1
               +SWLAPLLDTACDRL+FVLG+LFDL++ERN + DS   G K  DM+GY+GFHA+LR
Sbjct: 486  AAAKSWLAPLLDTACDRLSFVLGSLFDLALERNCSHDS-ECGIKGDDMDGYVGFHAALR 543


Top