BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034717
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]    61   5e-12
emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera]    59   1e-09
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]    52   1e-07
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc...    47   3e-07
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]    50   4e-07

>emb|CAN64509.1| hypothetical protein VITISV_041217 [Vitis vinifera]
          Length = 1269

 Score = 60.8 bits (146), Expect(2) = 5e-12
 Identities = 35/100 (35%), Positives = 57/100 (57%)
 Frame = -3

Query: 459 PDTTWVADTGATNHMTVDLKNLAQHASYTGNDKVLVDDGQALEINNIG*FGEDSFPRDS* 280
           P+TTW+ D+GA++H+T DL NLA H  + G D++++ DG  L I++    G  S    S 
Sbjct: 320 PNTTWLLDSGASHHVTTDLHNLALHXPFDGTDEIMIGDGSGLPISH---XGSTSLTTPSH 376

Query: 279 EWTLSHEVFASFINSFSCINTIFFHLFSCTQLSSFCWSHD 160
            +TLS+ +         C+ T+  +L S   +S FC S++
Sbjct: 377 SFTLSNVL---------CVPTMKRNLIS---ISQFCKSNN 404



 Score = 34.7 bits (78), Expect(2) = 5e-12
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = -1

Query: 179 AFVGVMTTAQNWHHRLGHPN 120
           AF  V TT   WHHRLGHP+
Sbjct: 437 AFSSVKTTLSEWHHRLGHPS 456


>emb|CAN75700.1| hypothetical protein VITISV_035987 [Vitis vinifera]
          Length = 1099

 Score = 58.5 bits (140), Expect(2) = 1e-09
 Identities = 33/98 (33%), Positives = 52/98 (53%)
 Frame = -3

Query: 453 TTWVADTGATNHMTVDLKNLAQHASYTGNDKVLVDDGQALEINNIG*FGEDSFPRDS*EW 274
           T+W+ D GA++H T DL NL+ H  Y G+D +++ DG  L I +IG          S   
Sbjct: 390 TSWLIDGGASHHATTDLHNLSMHTPYNGSDDIMIGDGSGLSITHIG----------SSSL 439

Query: 273 TLSHEVFASFINSFSCINTIFFHLFSCTQLSSFCWSHD 160
             +H  F   +N+  C+ T+  +L S   +S FC S++
Sbjct: 440 HTTHNTFK--LNNVLCVPTMKKNLIS---ISQFCTSNN 472



 Score = 28.5 bits (62), Expect(2) = 1e-09
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -1

Query: 179 AFVGVMTTAQNWHHRLGHP 123
           AF    TT   WH RLGHP
Sbjct: 513 AFSSRKTTLSEWHQRLGHP 531


>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
          Length = 920

 Score = 51.6 bits (122), Expect(2) = 1e-07
 Identities = 23/56 (41%), Positives = 37/56 (66%)
 Frame = -3

Query: 483 VPTCSSPSPDTTWVADTGATNHMTVDLKNLAQHASYTGNDKVLVDDGQALEINNIG 316
           V + S+ S D +W  D+GA++H+T +L NL   + YTG D+V + + + L I+NIG
Sbjct: 183 VASFSNSSADESWYLDSGASHHLTQNLGNLTSTSPYTGTDRVTIGNXKHLSISNIG 238



 Score = 28.9 bits (63), Expect(2) = 1e-07
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = -1

Query: 302 IVFQETHENGLYLMKFLHHSSTPSHASTQSFFISSAAHNSQAFVGVMTTAQNWHHRLGH 126
           ++ Q   ENGLY  KF   S+   ++S  +    ++A +S     +   A+ WH+RLGH
Sbjct: 260 VLAQGKLENGLY--KFPVFSNKKPYSSVNN----ASAFHSHFSSTIENKAELWHNRLGH 312


>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1241

 Score = 47.0 bits (110), Expect(3) = 3e-07
 Identities = 21/47 (44%), Positives = 27/47 (57%)
 Frame = -3

Query: 456 DTTWVADTGATNHMTVDLKNLAQHASYTGNDKVLVDDGQALEINNIG 316
           DT W  DTGAT+H+T +L  L     Y G DK+    G  +EI +IG
Sbjct: 307 DTNWYLDTGATDHITNELDKLDVREKYKGGDKIHTASGAGMEIKHIG 353



 Score = 26.2 bits (56), Expect(3) = 3e-07
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 105 KIMSTYSLPTHGKTNDLLFCSSCNKGKSIRLSF 7
           +++S  +LP     N    C +C KGKS +L +
Sbjct: 456 RVLSKNNLPCSTVANKDSICDACQKGKSHQLPY 488



 Score = 25.0 bits (53), Expect(3) = 3e-07
 Identities = 12/63 (19%), Positives = 21/63 (33%)
 Frame = -1

Query: 311 LGKIVFQETHENGLYLMKFLHHSSTPSHASTQSFFISSAAHNSQAFVGVMTTAQNWHHRL 132
           +    F E H N   +   +  ++       +  +    +   Q       +   WH RL
Sbjct: 387 MDNFAFLEVHSNYFLIKDRVTRNTILKGRCRRRLYSLPTSPAKQVHAATTPSFSRWHSRL 446

Query: 131 GHP 123
           GHP
Sbjct: 447 GHP 449


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score = 50.1 bits (118), Expect(2) = 4e-07
 Identities = 21/47 (44%), Positives = 34/47 (72%)
 Frame = -3

Query: 456 DTTWVADTGATNHMTVDLKNLAQHASYTGNDKVLVDDGQALEINNIG 316
           D+ W  D+GAT+HMT D + + Q   Y+GN++V+V +GQ+L I++ G
Sbjct: 430 DSEWFPDSGATSHMTSDTEGVNQPDVYSGNERVMVGNGQSLAISHTG 476



 Score = 28.5 bits (62), Expect(2) = 4e-07
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = -1

Query: 281 ENGLYLMKFLHHSSTPSHASTQSFFISSAAHNSQAFVGVMTTAQNWHHRLGHPN 120
           ENGLY++   HH+   + +S ++                  + + WH RLGHP+
Sbjct: 505 ENGLYVLDRRHHALVSTTSSPRA------------------SVRLWHTRLGHPH 540