BLASTX nr result
ID: Coptis25_contig00034708
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00034708 (384 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity ... 59 5e-07 ref|XP_002518123.1| hypothetical protein RCOM_1020410 [Ricinus c... 56 3e-06 >ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity protein 18 homolog [Vitis vinifera] Length = 948 Score = 58.5 bits (140), Expect = 5e-07 Identities = 44/128 (34%), Positives = 63/128 (49%) Frame = -1 Query: 384 KKFLRESDGRCTPLSVGDNTVCQALPTQGSGKARTTVDTNAENHLEMAKDKLDPGESKLK 205 KK L+ S + + G A+ T+ +A++ N + A++ ++ +SK Sbjct: 803 KKILQGSMSKTMHSTDGKRRENWAMTTEEKSRAQSG---NVSHAAGCAENNIETAKSKAS 859 Query: 204 ASTDSIVPGVIKSAEGVSQVKSPGATKKPSNGASNFLDRFRKMSGKDSQNPLQPLQNRAT 25 S S G SAE ++KS KKP G S F DRF+K+S K SQ +Q T Sbjct: 860 TSIVSSASGSCGSAEASVKLKSSRDVKKPPRG-STFFDRFKKLSSKGSQT-TNLIQEPVT 917 Query: 24 LERDSRPL 1 LERDSRPL Sbjct: 918 LERDSRPL 925 >ref|XP_002518123.1| hypothetical protein RCOM_1020410 [Ricinus communis] gi|223542719|gb|EEF44256.1| hypothetical protein RCOM_1020410 [Ricinus communis] Length = 170 Score = 56.2 bits (134), Expect = 3e-06 Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 14/116 (12%) Frame = -1 Query: 306 TQGSGKARTTVDTNAENHLEMAKDKLDPGESKLKAST-----------DSIVPGVI---K 169 T G K + + L+ A D SK++ DS P + K Sbjct: 33 TDGGSKENLDLANGKHSKLQSANDSTSLSASKIETRNNLLNRHQCKTGDSTKPSNLDFSK 92 Query: 168 SAEGVSQVKSPGATKKPSNGASNFLDRFRKMSGKDSQNPLQPLQNRATLERDSRPL 1 S+ ++KSPG KP G+++F DRFRK+S K S N +Q TLERD RPL Sbjct: 93 SSTSSMKLKSPG-NSKPCTGSTSFFDRFRKVSSKSSPNTDIAVQKTTTLERDLRPL 147