BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034708
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity ...    59   5e-07
ref|XP_002518123.1| hypothetical protein RCOM_1020410 [Ricinus c...    56   3e-06

>ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity protein 18 homolog [Vitis
            vinifera]
          Length = 948

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 44/128 (34%), Positives = 63/128 (49%)
 Frame = -1

Query: 384  KKFLRESDGRCTPLSVGDNTVCQALPTQGSGKARTTVDTNAENHLEMAKDKLDPGESKLK 205
            KK L+ S  +    + G      A+ T+   +A++    N  +    A++ ++  +SK  
Sbjct: 803  KKILQGSMSKTMHSTDGKRRENWAMTTEEKSRAQSG---NVSHAAGCAENNIETAKSKAS 859

Query: 204  ASTDSIVPGVIKSAEGVSQVKSPGATKKPSNGASNFLDRFRKMSGKDSQNPLQPLQNRAT 25
             S  S   G   SAE   ++KS    KKP  G S F DRF+K+S K SQ     +Q   T
Sbjct: 860  TSIVSSASGSCGSAEASVKLKSSRDVKKPPRG-STFFDRFKKLSSKGSQT-TNLIQEPVT 917

Query: 24   LERDSRPL 1
            LERDSRPL
Sbjct: 918  LERDSRPL 925


>ref|XP_002518123.1| hypothetical protein RCOM_1020410 [Ricinus communis]
           gi|223542719|gb|EEF44256.1| hypothetical protein
           RCOM_1020410 [Ricinus communis]
          Length = 170

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
 Frame = -1

Query: 306 TQGSGKARTTVDTNAENHLEMAKDKLDPGESKLKAST-----------DSIVPGVI---K 169
           T G  K    +     + L+ A D      SK++              DS  P  +   K
Sbjct: 33  TDGGSKENLDLANGKHSKLQSANDSTSLSASKIETRNNLLNRHQCKTGDSTKPSNLDFSK 92

Query: 168 SAEGVSQVKSPGATKKPSNGASNFLDRFRKMSGKDSQNPLQPLQNRATLERDSRPL 1
           S+    ++KSPG   KP  G+++F DRFRK+S K S N    +Q   TLERD RPL
Sbjct: 93  SSTSSMKLKSPG-NSKPCTGSTSFFDRFRKVSSKSSPNTDIAVQKTTTLERDLRPL 147