BLASTX nr result

ID: Coptis25_contig00034705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034705
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317570.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_002333254.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_002317569.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
emb|CBI35185.3| unnamed protein product [Vitis vinifera]              129   2e-28
emb|CBI35183.3| unnamed protein product [Vitis vinifera]              129   2e-28

>ref|XP_002317570.1| predicted protein [Populus trichocarpa] gi|222860635|gb|EEE98182.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  130 bits (328), Expect = 9e-29
 Identities = 71/157 (45%), Positives = 97/157 (61%)
 Frame = +1

Query: 1   IMRIMLEKKPTLIRQADHHGWTPLHYAAYANSSGIIIQLLEFDRFLAYIPEENGMSPLHI 180
           IM I+L  KP LI +ADHHG T LH+AA       + +LLEFD   AY+ ++NG SPLH+
Sbjct: 200 IMEILLRAKPHLITEADHHGRTALHHAASLGDRRAVERLLEFDECTAYVLDKNGHSPLHV 259

Query: 181 ATSKGYARVMTELIQRYPDCQELPDTRGRNFLHIAVVRKEKLLIETVLIESTMTKYIINQ 360
           A S G+A V+  +I   PD  EL D  GR+ LH AV+   K+ +   ++E    +++INQ
Sbjct: 260 AASNGHADVIERIIHYCPDSGELLDLNGRSVLHFAVL-SGKVNVVRCVVEIAELQWLINQ 318

Query: 361 PDNDGNTPLHLAAIYKDYDIVKFLSEDTRVNKSTMNK 471
            DN GNTPLHLAAI +   I++ L  D RV+    N+
Sbjct: 319 ADNGGNTPLHLAAIERQTRILRCLIWDERVDHRARNE 355


>ref|XP_002333254.1| predicted protein [Populus trichocarpa] gi|222835818|gb|EEE74253.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  130 bits (328), Expect = 9e-29
 Identities = 71/157 (45%), Positives = 97/157 (61%)
 Frame = +1

Query: 1   IMRIMLEKKPTLIRQADHHGWTPLHYAAYANSSGIIIQLLEFDRFLAYIPEENGMSPLHI 180
           IM I+L  KP LI +ADHHG T LH+AA       + +LLEFD   AY+ ++NG SPLH+
Sbjct: 200 IMEILLRAKPHLITEADHHGRTALHHAASLGDRRAVERLLEFDECTAYVLDKNGHSPLHV 259

Query: 181 ATSKGYARVMTELIQRYPDCQELPDTRGRNFLHIAVVRKEKLLIETVLIESTMTKYIINQ 360
           A S G+A V+  +I   PD  EL D  GR+ LH AV+   K+ +   ++E    +++INQ
Sbjct: 260 AASNGHADVIERIIHYCPDSGELLDLNGRSVLHFAVL-SGKVNVVRCVVEIAELQWLINQ 318

Query: 361 PDNDGNTPLHLAAIYKDYDIVKFLSEDTRVNKSTMNK 471
            DN GNTPLHLAAI +   I++ L  D RV+    N+
Sbjct: 319 ADNGGNTPLHLAAIERQTRILRCLIWDERVDHRARNE 355


>ref|XP_002317569.1| predicted protein [Populus trichocarpa] gi|222860634|gb|EEE98181.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  130 bits (327), Expect = 1e-28
 Identities = 70/157 (44%), Positives = 97/157 (61%)
 Frame = +1

Query: 1   IMRIMLEKKPTLIRQADHHGWTPLHYAAYANSSGIIIQLLEFDRFLAYIPEENGMSPLHI 180
           IM I+L  KP LI +ADHHG T LH+AA       + +LLEFD  +AY+ ++NG SPLH+
Sbjct: 200 IMEILLRAKPHLITEADHHGRTALHHAASLGDRRAVERLLEFDECIAYVLDKNGHSPLHV 259

Query: 181 ATSKGYARVMTELIQRYPDCQELPDTRGRNFLHIAVVRKEKLLIETVLIESTMTKYIINQ 360
           A   G+A V+  +I   PD  EL D  GR+ LH AV+   K+ +   ++E    +++INQ
Sbjct: 260 AARNGHADVIERIIHYCPDSGELLDLNGRSVLHFAVL-SAKVNVVRCVVEIAELQWLINQ 318

Query: 361 PDNDGNTPLHLAAIYKDYDIVKFLSEDTRVNKSTMNK 471
            DN GNTPLHLAAI +   I++ L  D RV+    N+
Sbjct: 319 ADNGGNTPLHLAAIERQTRILRCLIWDERVDHRARNE 355


>emb|CBI35185.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/173 (38%), Positives = 103/173 (59%)
 Frame = +1

Query: 1   IMRIMLEKKPTLIRQADHHGWTPLHYAAYANSSGIIIQLLEFDRFLAYIPEENGMSPLHI 180
           IM ++ E K  +I++AD  GWTPLHYAA+        +LL++D+ +A + +      LHI
Sbjct: 105 IMEVLFEMKKDVIKKADEFGWTPLHYAAHLGHLKATEKLLKYDKSVAGLLDVEHSCALHI 164

Query: 181 ATSKGYARVMTELIQRYPDCQELPDTRGRNFLHIAVVRKEKLLIETVLIESTMTKYIINQ 360
           A  +G+  VM ++I   PD  +L D +GR  LH+A       +++ +L +  + + IIN+
Sbjct: 165 AAKEGHTNVMEQIITCLPDVYDLIDNKGRTILHVAAQYGNARVVKYILKKPNL-ESIINE 223

Query: 361 PDNDGNTPLHLAAIYKDYDIVKFLSEDTRVNKSTMNKEKLTPLTILETKTGPG 519
           PD +GNTPLHLAAIY  Y +V  L+ D RV+K  MN E L  + I+++    G
Sbjct: 224 PDKEGNTPLHLAAIYGHYGVVIMLAADDRVDKRAMNNEYLKTIDIVQSNMDIG 276


>emb|CBI35183.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/173 (38%), Positives = 103/173 (59%)
 Frame = +1

Query: 1   IMRIMLEKKPTLIRQADHHGWTPLHYAAYANSSGIIIQLLEFDRFLAYIPEENGMSPLHI 180
           IM ++ E K  +I++AD  GWTPLHYAA+        +LL++D+ +A + +      LHI
Sbjct: 255 IMEVLFEMKKDVIKKADEFGWTPLHYAAHLGHLEATEKLLKYDKSVAGLLDVEHSCALHI 314

Query: 181 ATSKGYARVMTELIQRYPDCQELPDTRGRNFLHIAVVRKEKLLIETVLIESTMTKYIINQ 360
           A  +G+  VM ++I   PD  +L D +GR  LH+A       +++ +L +  + + IIN+
Sbjct: 315 AAKEGHTNVMEQIITCLPDVYDLIDNKGRTILHVAAQYGNARVVKYILKKPNL-ESIINE 373

Query: 361 PDNDGNTPLHLAAIYKDYDIVKFLSEDTRVNKSTMNKEKLTPLTILETKTGPG 519
           PD +GNTPLHLAAIY  Y +V  L+ D RV+K  MN E L  + I+++    G
Sbjct: 374 PDKEGNTPLHLAAIYGHYGVVIMLAADDRVDKRAMNNEYLKTIDIVQSNMDIG 426


Top