BLASTX nr result
ID: Coptis25_contig00034695
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00034695
(569 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_16653004.1| hypothetical protein HMPREF9597_00208 [Propio... 243 1e-62
ref|ZP_16527378.1| hypothetical protein HMPREF9602_02259 [Propio... 243 1e-62
ref|NP_780783.1| hypothetical protein CTC00065 [Clostridium teta... 136 1e-39
ref|ZP_04997888.1| conserved hypothetical protein [Streptomyces ... 166 2e-39
ref|ZP_02863215.1| conserved hypothetical protein [Clostridium b... 133 2e-39
>ref|ZP_16653004.1| hypothetical protein HMPREF9597_00208 [Propionibacterium acnes
HL005PA4] gi|314916672|gb|EFS80503.1| hypothetical
protein HMPREF9597_00208 [Propionibacterium acnes
HL005PA4]
Length = 202
Score = 243 bits (621), Expect = 1e-62
Identities = 115/121 (95%), Positives = 118/121 (97%)
Frame = -1
Query: 569 ADIEVPNHAVAMSARARSACYPRGTFYPLSDGASTSHRQITSPDFRPCSTCQSHSQAPLC 390
ADIEVPNHAVAMSARARSACYPRGTFYPLSDGASTSHRQITSPDFRPCSTCQSHSQAPLC
Sbjct: 82 ADIEVPNHAVAMSARARSACYPRGTFYPLSDGASTSHRQITSPDFRPCSTCQSHSQAPLC 141
Query: 389 TYTQHLVADQAEGTFGRLRYPLGGNRPS*TTHQALSLNRITVHSEITRTIRVVFHQRLHH 210
TYT HL+ +QAEGTFGRLRYPLGG+RPS TTHQALSLNRITVHSEITRTIRVVFHQRLHH
Sbjct: 142 TYTHHLITNQAEGTFGRLRYPLGGDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHH 201
Query: 209 H 207
H
Sbjct: 202 H 202
>ref|ZP_16527378.1| hypothetical protein HMPREF9602_02259 [Propionibacterium acnes
HL030PA2] gi|422510964|ref|ZP_16587109.1| hypothetical
protein HMPREF9589_01467 [Propionibacterium acnes
HL059PA1] gi|422544914|ref|ZP_16620746.1| hypothetical
protein HMPREF9618_01608 [Propionibacterium acnes
HL082PA1] gi|313815718|gb|EFS53432.1| hypothetical
protein HMPREF9589_01467 [Propionibacterium acnes
HL059PA1] gi|314963296|gb|EFT07396.1| hypothetical
protein HMPREF9618_01608 [Propionibacterium acnes
HL082PA1] gi|315109668|gb|EFT81644.1| hypothetical
protein HMPREF9602_02259 [Propionibacterium acnes
HL030PA2]
Length = 124
Score = 243 bits (621), Expect = 1e-62
Identities = 115/121 (95%), Positives = 118/121 (97%)
Frame = -1
Query: 569 ADIEVPNHAVAMSARARSACYPRGTFYPLSDGASTSHRQITSPDFRPCSTCQSHSQAPLC 390
ADIEVPNHAVAMSARARSACYPRGTFYPLSDGASTSHRQITSPDFRPCSTCQSHSQAPLC
Sbjct: 4 ADIEVPNHAVAMSARARSACYPRGTFYPLSDGASTSHRQITSPDFRPCSTCQSHSQAPLC 63
Query: 389 TYTQHLVADQAEGTFGRLRYPLGGNRPS*TTHQALSLNRITVHSEITRTIRVVFHQRLHH 210
TYT HL+ +QAEGTFGRLRYPLGG+RPS TTHQALSLNRITVHSEITRTIRVVFHQRLHH
Sbjct: 64 TYTHHLITNQAEGTFGRLRYPLGGDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHH 123
Query: 209 H 207
H
Sbjct: 124 H 124
>ref|NP_780783.1| hypothetical protein CTC00065 [Clostridium tetani E88]
gi|28209861|ref|NP_780805.1| hypothetical protein
CTC00089 [Clostridium tetani E88]
gi|28209981|ref|NP_780925.1| hypothetical protein
CTC00214 [Clostridium tetani E88]
gi|28210288|ref|NP_781232.1| hypothetical protein
CTC00549 [Clostridium tetani E88]
gi|28202274|gb|AAO34720.1| hypothetical protein
CTC_00065 [Clostridium tetani E88]
gi|28202296|gb|AAO34742.1| hypothetical protein
CTC_00089 [Clostridium tetani E88]
gi|28202416|gb|AAO34862.1| hypothetical protein
CTC_00214 [Clostridium tetani E88]
gi|28202724|gb|AAO35169.1| hypothetical protein
CTC_00549 [Clostridium tetani E88]
gi|154816039|emb|CAO85713.1| hypothetical CTC00065-like
protein [Clostridium sp.]
Length = 218
Score = 136 bits (342), Expect(3) = 1e-39
Identities = 64/100 (64%), Positives = 76/100 (76%)
Frame = -1
Query: 569 ADIEVPNHAVAMSARARSACYPRGTFYPLSDGASTSHRQITSPDFRPCSTCQSHSQAPLC 390
ADIEVPN V + + RSACYPRG+FYPLSDG T + +IT PDFRPCSTC SQAPLC
Sbjct: 4 ADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPPTRNHRITKPDFRPCSTCMCRSQAPLC 63
Query: 389 TYTQHLVADQAEGTFGRLRYPLGGNRPS*TTHQALSLNRI 270
YT ++D+AEGTFGRLRY LGG+RPS T H +S ++I
Sbjct: 64 LYTLRAISDRAEGTFGRLRYFLGGDRPSQTAHLTMSRDQI 103
Score = 39.3 bits (90), Expect(3) = 1e-39
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -2
Query: 97 SIFTRNAISPSSWWRQ*GNRYSIRAGRNLPDK 2
SIFT ISP RQ + Y+IRAGRNLPDK
Sbjct: 162 SIFTCTTISPDLLLRQCPSHYAIRAGRNLPDK 193
Score = 33.5 bits (75), Expect(3) = 1e-39
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3
Query: 270 HGPQ*DNQNNQSGISPTTPPPLAWPHQRLPPILHKPSQSPIPNYSK 133
HGP+ + Q Q GI TP L LPPIL++ ++ + +YSK
Sbjct: 104 HGPRLEFQYYQGGIPRMTPQKLTLLLLSLPPILYRQYRNSMLSYSK 149
>ref|ZP_04997888.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194341433|gb|EDX22399.1| conserved hypothetical
protein [Streptomyces sp. Mg1]
Length = 91
Score = 166 bits (421), Expect = 2e-39
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = -1
Query: 569 ADIEVPNHAVAMSARARSACYPRGTFYPLSDGASTSHRQITSPDFRPCSTCQSHSQAPLC 390
ADIEVPNH V M + RSACYPRGTFYPLSDGASTSHR+ITSPDFRPCST +SHSQAPLC
Sbjct: 4 ADIEVPNHPVDMDSWGRSACYPRGTFYPLSDGASTSHRRITSPDFRPCSTRRSHSQAPLC 63
Query: 389 TYTQHLVADQAEGTFGRLRYPLGGNRPS 306
TYTQHL+A+QAEGTFGRLRYPLGGNRPS
Sbjct: 64 TYTQHLIANQAEGTFGRLRYPLGGNRPS 91
>ref|ZP_02863215.1| conserved hypothetical protein [Clostridium botulinum C str.
Eklund] gi|169338126|ref|ZP_02863226.1| conserved
hypothetical protein [Clostridium botulinum C str.
Eklund] gi|169338132|ref|ZP_02863230.1| conserved
hypothetical protein [Clostridium botulinum C str.
Eklund] gi|118135266|gb|ABK62310.1| conserved
hypothetical protein [Clostridium novyi NT]
gi|118135598|gb|ABK62642.1| conserved hypothetical
protein [Clostridium novyi NT]
gi|169294009|gb|EDS76142.1| conserved hypothetical
protein [Clostridium botulinum C str. Eklund]
gi|169294037|gb|EDS76170.1| conserved hypothetical
protein [Clostridium botulinum C str. Eklund]
gi|169294149|gb|EDS76282.1| conserved hypothetical
protein [Clostridium botulinum C str. Eklund]
Length = 213
Score = 133 bits (335), Expect(3) = 2e-39
Identities = 63/100 (63%), Positives = 75/100 (75%)
Frame = -1
Query: 569 ADIEVPNHAVAMSARARSACYPRGTFYPLSDGASTSHRQITSPDFRPCSTCQSHSQAPLC 390
ADIEVPN V + + RSACYPRG+FYPLSDG S + +IT PDFRPCSTC SQAP C
Sbjct: 4 ADIEVPNLPVDVDSWGRSACYPRGSFYPLSDGPSIQNHRITKPDFRPCSTCMCRSQAPFC 63
Query: 389 TYTQHLVADQAEGTFGRLRYPLGGNRPS*TTHQALSLNRI 270
T ++D+AEGTFGRLRY LGG+RPS T H A+S ++I
Sbjct: 64 LCTLRAISDRAEGTFGRLRYLLGGDRPSQTAHLAMSCDQI 103
Score = 41.2 bits (95), Expect(3) = 2e-39
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -2
Query: 97 SIFTRNAISPSSWWRQ*GNRYSIRAGRNLPDK 2
SIFT ISP RQ N Y+IRAGRNLPDK
Sbjct: 162 SIFTCTTISPDLLPRQCSNHYAIRAGRNLPDK 193
Score = 33.9 bits (76), Expect(3) = 2e-39
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = -3
Query: 270 HGPQ*DNQNNQSGISPTTPPPLAWPHQRLPPILHKPSQSPIPNYSK 133
HG Q + Q Q GI TPP L LPPIL++ ++ + +YSK
Sbjct: 104 HGLQLEFQYYQGGIPRMTPPKLTPWFLSLPPILYRQYRNSMLSYSK 149