BLASTX nr result
ID: Coptis25_contig00034682
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00034682 (344 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 62 6e-08 gb|ABN08954.1| Ribonuclease H [Medicago truncatula] 61 1e-07 ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g... 57 1e-06 >gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H; Endonuclease/exonuclease/phosphatase [Medicago truncatula] Length = 1246 Score = 61.6 bits (148), Expect = 6e-08 Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 1/93 (1%) Frame = -2 Query: 337 IIKLNTDGSIMDNPGPPGISIAF*NYLGEFLLTVW*NIGVGTNFRAECLAIIVGVETALH 158 ++K+NTDGS++ G F + G FL NIG+ + F AE LA I+ +E A H Sbjct: 1022 LLKVNTDGSVVG--GLAACGGLFRDSSGSFLGAFSCNIGLASVFHAETLAFILALEHAAH 1079 Query: 157 KGWKQLWVEFDSEAAVKAFENDQIP*ELV-SRW 62 GW+ LW+E DS +A+ F N + L+ +RW Sbjct: 1080 HGWRNLWLESDSTSALMIFSNSSLVQWLLRNRW 1112 >gb|ABN08954.1| Ribonuclease H [Medicago truncatula] Length = 175 Score = 60.8 bits (146), Expect = 1e-07 Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 3/114 (2%) Frame = -2 Query: 334 IKLNTDGSIMDNPGPPGISIAF*NYLGEFLLTVW*NIGVGTNFRAECLAIIVGVETALHK 155 +K+N DGS P F N+ L NIG T F+AE A I +E ++ Sbjct: 11 VKINLDGSAFGAPSCGATGGVFRNWQTHSLGGFAQNIGHATCFKAELCAAIFAIEKSIEY 70 Query: 154 GWKQLWVEFDSEAAVKAF-ENDQIP*ELVSRWLSCKLEVQSIKFIA--IWREAN 2 + +W+E DS+ VKAF ++ +P +L +RW +C Q IK + I RE N Sbjct: 71 NLRDIWLETDSKLVVKAFSSSEHVPWQLRTRWNNCLALAQKIKCVCTHIHREGN 124 >ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] gi|355506707|gb|AES87849.1| GDSL esterase/lipase [Medicago truncatula] Length = 1004 Score = 57.4 bits (137), Expect = 1e-06 Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 3/114 (2%) Frame = -2 Query: 334 IKLNTDGSIMDNPGPPGISIAF*NYLGEFLLTVW*NIGVGTNFRAECLAIIVGVETALHK 155 IK NTDG+ G F + FL N+G G+ ++ E AI+ VE A + Sbjct: 233 IKFNTDGASTATSSSCGG--VFRDQNANFLSCFAKNLGGGSAYQPELAAIMRVVEIAYQR 290 Query: 154 GWKQLWVEFDSEAAVKAFEN-DQIP*ELVSRWLSCKLEVQSIKFIA--IWREAN 2 W+ +W+E DS V AF+ IP L +RW++C+ + + F+ I+RE N Sbjct: 291 NWRNIWIESDSALVVMAFKKMSMIPCRLRNRWINCRKLLCRMNFVITHIYREDN 344