BLASTX nr result

ID: Coptis25_contig00034662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034662
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268993.1| PREDICTED: NEDD8 ultimate buster 1 [Vitis vi...    83   3e-14
ref|XP_003579376.1| PREDICTED: uncharacterized protein LOC100829...    79   4e-13
ref|XP_002532310.1| NEDD8 ultimate buster, putative [Ricinus com...    75   8e-12
ref|XP_003533858.1| PREDICTED: NEDD8 ultimate buster 1-like [Gly...    74   1e-11
tpg|DAA35724.1| TPA: hypothetical protein ZEAMMB73_564025 [Zea m...    74   2e-11

>ref|XP_002268993.1| PREDICTED: NEDD8 ultimate buster 1 [Vitis vinifera]
           gi|296084548|emb|CBI25569.3| unnamed protein product
           [Vitis vinifera]
          Length = 552

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 47/131 (35%), Positives = 73/131 (55%), Gaps = 7/131 (5%)
 Frame = +3

Query: 156 YATAKHLMKKEMYKDAIFMLAVAEDQNCLCGEHEVSAIMG-PVLHLDTVWCYFRLHDMEF 332
           +A AK ++KKE YKDA+ +L++ E+   LC    +  +   P+L +D VWCYF L D+ +
Sbjct: 149 HANAKQMIKKENYKDALEVLSMGEEAFSLCNPKVIELVDNVPILQIDMVWCYFMLRDIRW 208

Query: 333 LPRARDRLGKAQLGLDQKYWKS------YDLSYQPFLALCFRLLLFKGITAFYLSRSSEC 494
           L  A  RL KA+ G+++ + K             P LAL  RL L +G+ +F+  +  + 
Sbjct: 209 LSEAGIRLAKAREGIERSHGKDASRVRVLQNGRYPELALHLRLELLEGVVSFHSGQFEKS 268

Query: 495 KKFLLSAKPLY 527
           KK L SA+  Y
Sbjct: 269 KKVLTSAQAKY 279


>ref|XP_003579376.1| PREDICTED: uncharacterized protein LOC100829250 [Brachypodium
           distachyon]
          Length = 577

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
 Frame = +3

Query: 135 LKMVQVSYATAKHLMKKEMYKDAIFMLAVAEDQNCLCGEHEVSAIMG-PVLHLDTVWCYF 311
           LKM  + +  AK L+KK+MYK+A+ +L +AE+   LC    +  +   P+L LD VWCYF
Sbjct: 156 LKMALMLHQKAKVLIKKDMYKEALDVLIMAEEAFSLCDPKLIERVDNVPMLQLDIVWCYF 215

Query: 312 RLHDMEFLPRARDRLGKAQLGLDQKYWKS------YDLSYQPFLALCFRLLLFKGITAFY 473
            L D+  L  A DRL KA++G ++ + K          +    LA+  RL L +G+ A++
Sbjct: 216 MLRDVSRLEVAGDRLKKARVGFERSHGKDSSRFRLLQAARHADLAIYVRLELLEGVVAYH 275

Query: 474 LSRSSECKKFLLSAKPLY 527
              + + +  L SA+  Y
Sbjct: 276 NGHTEKARGSLSSAQSKY 293


>ref|XP_002532310.1| NEDD8 ultimate buster, putative [Ricinus communis]
           gi|223527979|gb|EEF30062.1| NEDD8 ultimate buster,
           putative [Ricinus communis]
          Length = 559

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
 Frame = +3

Query: 129 EELKMVQVSYATAKHLMKKEMYKDAIFMLAVAEDQNCLCGEHEVSAIMG-PVLHLDTVWC 305
           + + M  + +A  K L++++M+KDA+ +L + E+   LC    +  +    +L +D VWC
Sbjct: 145 QAIMMGLMLHANGKGLIRRQMFKDALEVLTMGEEAFSLCNPKSIELVDNISILQIDMVWC 204

Query: 306 YFRLHDMEFLPRARDRLGKAQLGLDQKYWKS------YDLSYQPFLALCFRLLLFKGITA 467
           YF L D+ +L  A  RL KA+ GL++ + K               L+L  RL L +G+ A
Sbjct: 205 YFMLRDIAWLSVAGVRLEKAREGLERAHGKDSSRFRLLQAGRSSELSLYLRLELLEGVVA 264

Query: 468 FYLSRSSECKKFLLSAK 518
           ++  +  +C+K+L SA+
Sbjct: 265 YHSGQFDKCRKYLTSAQ 281


>ref|XP_003533858.1| PREDICTED: NEDD8 ultimate buster 1-like [Glycine max]
          Length = 556

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
 Frame = +3

Query: 156 YATAKHLMKKEMYKDAIFMLAVAEDQNCLCGEHEVSAIMG-PVLHLDTVWCYFRLHDMEF 332
           +A  K L+++  YKDA+ +L++ E+   LC    +  I   P+L +D VWCYF + D+ +
Sbjct: 151 HAKGKRLIRQGNYKDALEVLSMGEESFSLCDPKVIELIDNVPILQIDMVWCYFMIRDIRW 210

Query: 333 LPRARDRLGKAQLGLDQKYWKS------YDLSYQPFLALCFRLLLFKGITAFYLSRSSEC 494
           L  A  RL  A+ G+++ + K         +   P LAL  RL L +G+ A+++ +  + 
Sbjct: 211 LSDAGKRLEMAREGIERAHGKDSFRLRLLQVGRYPELALHLRLELLEGVVAYHIGQLEKS 270

Query: 495 KKFLLSAK 518
           KK L SA+
Sbjct: 271 KKTLASAR 278


>tpg|DAA35724.1| TPA: hypothetical protein ZEAMMB73_564025 [Zea mays]
          Length = 568

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
 Frame = +3

Query: 135 LKMVQVSYATAKHLMKKEMYKDAIFMLAVAEDQNCLCGEHEVSAIMG-PVLHLDTVWCYF 311
           L M  + +  AK  MKK MYK+A+ +L +AE+   LC    +  +   P+L LD VWCYF
Sbjct: 159 LTMALMLHQKAKTQMKKGMYKEALDVLIMAEEAFSLCDPKLIEKVDNVPMLQLDIVWCYF 218

Query: 312 RLHDMEFLPRARDRLGKAQLGLDQKYWKS------YDLSYQPFLALCFRLLLFKGITAFY 473
            L D+  L  A  RL KA+LG ++ + K            Q  LA+  RL L +G+ A++
Sbjct: 219 VLRDVSCLEVAGARLEKARLGFERSHGKDSTRFRILQAGRQADLAIYVRLELLEGVVAYH 278

Query: 474 LSRSSECKKFLLSAKPLY 527
                + ++ L SA   Y
Sbjct: 279 NGHVEKARESLTSAHAKY 296


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