BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034653
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534418.1| Structural maintenance of chromosome, putati...   318   4e-85
ref|XP_003543852.1| PREDICTED: structural maintenance of chromos...   317   6e-85
ref|XP_002323859.1| condensin complex components subunit [Populu...   317   6e-85
ref|XP_003633856.1| PREDICTED: structural maintenance of chromos...   317   1e-84
emb|CBI22212.3| unnamed protein product [Vitis vinifera]              317   1e-84

>ref|XP_002534418.1| Structural maintenance of chromosome, putative [Ricinus communis]
           gi|223525329|gb|EEF27966.1| Structural maintenance of
           chromosome, putative [Ricinus communis]
          Length = 1259

 Score =  318 bits (815), Expect = 4e-85
 Identities = 160/171 (93%), Positives = 163/171 (95%)
 Frame = +1

Query: 40  SKSRNPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRA 219
           S ++ PRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRA
Sbjct: 19  SSNKPPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRA 78

Query: 220 KQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGGYEAVAGSDFVITRVAFRDNS 399
           KQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDG YE V  SDFVITRVAFRDNS
Sbjct: 79  KQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGNYEVVPRSDFVITRVAFRDNS 138

Query: 400 SKYYINDRGSTFTEVTKKLKEKGVDLDNNRFLILQGEVEQISLMKPRAQGP 552
           SKYYINDRGS FTEVTKKLK KGVDLDNNRFLILQGEVEQISLMKP+AQGP
Sbjct: 139 SKYYINDRGSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGP 189


>ref|XP_003543852.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Glycine max]
          Length = 1319

 Score =  317 bits (813), Expect = 6e-85
 Identities = 160/169 (94%), Positives = 162/169 (95%)
 Frame = +1

Query: 46  SRNPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQ 225
           S  PRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQ
Sbjct: 95  SARPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQ 154

Query: 226 MRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGGYEAVAGSDFVITRVAFRDNSSK 405
           MRLNKVSELIHNSTNHQNLDSAGVSVHFQEI+D DDG YEAVAGSDFVITRVAFRDNSSK
Sbjct: 155 MRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDSDDGTYEAVAGSDFVITRVAFRDNSSK 214

Query: 406 YYINDRGSTFTEVTKKLKEKGVDLDNNRFLILQGEVEQISLMKPRAQGP 552
           YYINDR S FTEVTKKLK KGVDLDNNRFLILQGEVEQISLMKP+AQGP
Sbjct: 215 YYINDRTSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGP 263


>ref|XP_002323859.1| condensin complex components subunit [Populus trichocarpa]
           gi|222866861|gb|EEF03992.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1256

 Score =  317 bits (813), Expect = 6e-85
 Identities = 159/174 (91%), Positives = 165/174 (94%)
 Frame = +1

Query: 28  TESTSKSRNPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF 207
           T +   S+ PRLFIKEM+MRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF
Sbjct: 20  TSAGGSSKAPRLFIKEMIMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF 79

Query: 208 GKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGGYEAVAGSDFVITRVAF 387
           GKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDG YEAV+GSDFVITRVAF
Sbjct: 80  GKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGTYEAVSGSDFVITRVAF 139

Query: 388 RDNSSKYYINDRGSTFTEVTKKLKEKGVDLDNNRFLILQGEVEQISLMKPRAQG 549
           RDNSSKYYINDR S FTEVTKKLK KGVDLDNNRFLILQGEVEQISLM+P+AQG
Sbjct: 140 RDNSSKYYINDRSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMRPKAQG 193


>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Vitis vinifera]
          Length = 1486

 Score =  317 bits (811), Expect = 1e-84
 Identities = 159/170 (93%), Positives = 163/170 (95%)
 Frame = +1

Query: 43  KSRNPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAK 222
           +SR PRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAK
Sbjct: 261 RSRAPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAK 320

Query: 223 QMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGGYEAVAGSDFVITRVAFRDNSS 402
           QMRLNKVSELIHNSTNHQNLDSAGVSVHFQEI+DLDDG YEAV GSDFVI RVAF+DNSS
Sbjct: 321 QMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEAVPGSDFVIARVAFQDNSS 380

Query: 403 KYYINDRGSTFTEVTKKLKEKGVDLDNNRFLILQGEVEQISLMKPRAQGP 552
           KYYINDR S FTEVTKKLK KGVDLDNNRFLILQGEVEQISLMKP+AQGP
Sbjct: 381 KYYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGP 430


>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
          Length = 1253

 Score =  317 bits (811), Expect = 1e-84
 Identities = 159/170 (93%), Positives = 163/170 (95%)
 Frame = +1

Query: 43  KSRNPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAK 222
           +SR PRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAK
Sbjct: 22  RSRAPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAK 81

Query: 223 QMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGGYEAVAGSDFVITRVAFRDNSS 402
           QMRLNKVSELIHNSTNHQNLDSAGVSVHFQEI+DLDDG YEAV GSDFVI RVAF+DNSS
Sbjct: 82  QMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEAVPGSDFVIARVAFQDNSS 141

Query: 403 KYYINDRGSTFTEVTKKLKEKGVDLDNNRFLILQGEVEQISLMKPRAQGP 552
           KYYINDR S FTEVTKKLK KGVDLDNNRFLILQGEVEQISLMKP+AQGP
Sbjct: 142 KYYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGP 191