BLASTX nr result

ID: Coptis25_contig00034647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034647
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310730.1| predicted protein [Populus trichocarpa] gi|2...   108   9e-22
ref|XP_003551033.1| PREDICTED: B3 domain-containing protein Os01...   105   6e-21
ref|XP_002282645.1| PREDICTED: B3 domain-containing protein Os06...   104   1e-20
ref|XP_004136984.1| PREDICTED: B3 domain-containing protein At3g...   102   7e-20
ref|XP_002883165.1| DNA binding protein [Arabidopsis lyrata subs...   102   7e-20

>ref|XP_002310730.1| predicted protein [Populus trichocarpa] gi|222853633|gb|EEE91180.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score =  108 bits (270), Expect = 9e-22
 Identities = 64/152 (42%), Positives = 92/152 (60%), Gaps = 2/152 (1%)
 Frame = +1

Query: 181 QAEEQLANLDPNFPSFVKAMARSNVMGK--MGIPEELGRSHLPKEDAMFILVDENQKEYI 354
           +AEE  +NL+P FPSFVK++ RS+V     MG+P +  R+HLP  DA   L DE  KE+ 
Sbjct: 94  RAEEVQSNLEPAFPSFVKSLVRSHVASCFWMGLPGQFCRAHLPHVDATVTLQDECGKEFK 153

Query: 355 TKYLCHVKNPSELSSGWGHFSKAHKLVEGDHLVFQLVNNTTFQVYIIRAYGPGAIDLTVN 534
            KY+ +    + LS+GW  F  AH+L EGD LVFQL+ + TF+VY+IRA     +D  + 
Sbjct: 154 MKYIAY---KTGLSAGWRQFCVAHRLFEGDVLVFQLIESCTFKVYVIRANDLTEVDGALG 210

Query: 535 SPPKHTSIRKNIRTSEKIEKKPRKNVSLAVLQ 630
                  I++NI       K+PR ++ LA++Q
Sbjct: 211 LLNLDAQIKQNIAGKSSKRKRPR-SLPLAIVQ 241


>ref|XP_003551033.1| PREDICTED: B3 domain-containing protein Os01g0234100-like [Glycine
           max]
          Length = 480

 Score =  105 bits (263), Expect = 6e-21
 Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 21/182 (11%)
 Frame = +1

Query: 181 QAEEQLANLDPNFPSFVKAMARSNVMGK--MGIPEELGRSHLPKEDAMFILVDENQKEYI 354
           QAEE  +NL+  FPSFVK++ RS+V     MG+P    + HLP +D  FIL DE+ KEY+
Sbjct: 104 QAEEVQSNLEREFPSFVKSLVRSHVASCFWMGLPVSFCKRHLPDKDTTFILEDESGKEYM 163

Query: 355 TKYLCHVKNPSELSSGWGHFSKAHKLVEGDHLVFQLVNNTTFQVYIIRAYGPGAID---L 525
           TKY+      + LS+GW  FS  HKL EGD +VFQLV  T F+VYIIRA     +D   L
Sbjct: 164 TKYIAC---KTGLSAGWRQFSAVHKLHEGDVVVFQLVEPTKFKVYIIRANNTRELDGAFL 220

Query: 526 TVNSPPK----------------HTSIRKNIRTSEKIEKKPRKNVSLAVLQPPTLDSITD 657
           +++S  K                + S RK+ ++ ++ + + +K  S + L+P    S+  
Sbjct: 221 SLDSCIKQKMGGNDNADSDDVACNNSKRKHGKSVQQ-DVQTKKKASASRLRPKARPSVEQ 279

Query: 658 SE 663
           SE
Sbjct: 280 SE 281


>ref|XP_002282645.1| PREDICTED: B3 domain-containing protein Os06g0194400-like [Vitis
           vinifera]
          Length = 252

 Score =  104 bits (260), Expect = 1e-20
 Identities = 57/117 (48%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
 Frame = +1

Query: 154 DKAKLCAKEQAEEQLANLDPNFPSFVKAMARSNVMGK--MGIPEELGRSHLPKEDAMFIL 327
           ++A+ CA E+AEE  A+L+P +PSF+K+M +S+V G   +G+P    ++ LPK D +  L
Sbjct: 105 EEARTCAMERAEELQASLEPQYPSFLKSMLQSHVTGGFWLGLPVHFCKTTLPKSDVIMNL 164

Query: 328 VDENQKEYITKYLCHVKNPSELSSGWGHFSKAHKLVEGDHLVFQLVNNTTFQVYIIR 498
           V E   EY T +L      S LS GW  FS AHKLV+GD LVFQLV  T F+VYI+R
Sbjct: 165 VGEEGDEYPTVFLAR---KSGLSGGWKRFSVAHKLVDGDALVFQLVRPTKFKVYIVR 218


>ref|XP_004136984.1| PREDICTED: B3 domain-containing protein At3g19184-like [Cucumis
           sativus] gi|449519286|ref|XP_004166666.1| PREDICTED: B3
           domain-containing protein At3g19184-like [Cucumis
           sativus]
          Length = 322

 Score =  102 bits (254), Expect = 7e-20
 Identities = 54/119 (45%), Positives = 80/119 (67%), Gaps = 2/119 (1%)
 Frame = +1

Query: 154 DKAKLCAKEQAEEQLANLDPNFPSFVKAMARSNVMGK--MGIPEELGRSHLPKEDAMFIL 327
           D+ +  A ++A +  ++L+  +PSFVK M +S+V G   +G+P +  ++HLP+ED +  L
Sbjct: 104 DEERQYAIDRARDLQSSLESEYPSFVKPMLQSHVSGGFWLGLPVQFCKTHLPREDEILTL 163

Query: 328 VDENQKEYITKYLCHVKNPSELSSGWGHFSKAHKLVEGDHLVFQLVNNTTFQVYIIRAY 504
           VDE++ E+ TKYL    + + LS GW  FS  H+LV+GD LVFQL N T F+VYIIR Y
Sbjct: 164 VDEDENEFQTKYLA---DKTGLSGGWRGFSIDHQLVDGDALVFQLTNPTEFKVYIIRTY 219


>ref|XP_002883165.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329005|gb|EFH59424.1| DNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 275

 Score =  102 bits (254), Expect = 7e-20
 Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
 Frame = +1

Query: 154 DKAKLCAKEQAEEQLANLDPNFPSFVKAMARSNVMGK--MGIPEELGRSHLPKEDAMFIL 327
           D A++ A ++AE+  ++LDP FPSF K M +S+V G   +G+P    ++H+PK D M  L
Sbjct: 103 DDARMYAFDRAEKLQSSLDPEFPSFTKPMLQSHVTGGFWLGLPLPFCKAHMPKRDEMMTL 162

Query: 328 VDENQKEYITKYLCHVKNPSELSSGWGHFSKAHKLVEGDHLVFQLVNNTTFQVYIIRAYG 507
           VDE  +E + KYL        LS GW  F+  H+LV+GD +VFQL+  T F+VYIIR   
Sbjct: 163 VDEEDEESMVKYLAEKNG---LSGGWRGFAIDHQLVDGDAVVFQLITRTMFKVYIIRVNE 219

Query: 508 PGAIDLTVNSPPKHTSIRKNIRTSEKIEKKPRKNVSLA 621
               D   N   +            ++ KK ++NVS A
Sbjct: 220 DANKDSDGNEEDED--------NDNELNKKQKENVSEA 249


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