BLASTX nr result

ID: Coptis25_contig00034635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034635
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321711.1| MIKC mads-box transcription factor [Populus ...   132   2e-29
gb|ABV23568.1| MADS-box protein [Populus deltoides]                   132   2e-29
ref|XP_002318140.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
emb|CAL36573.1| deficiens H7 homologue [Misopates orontium]           128   6e-28
emb|CAC44080.1| putative MADS-domain transcription factor DEFH7 ...   127   9e-28

>ref|XP_002321711.1| MIKC mads-box transcription factor [Populus trichocarpa]
           gi|118482604|gb|ABK93222.1| unknown [Populus
           trichocarpa] gi|222868707|gb|EEF05838.1| MIKC mads-box
           transcription factor [Populus trichocarpa]
          Length = 203

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/89 (75%), Positives = 78/89 (87%)
 Frame = +1

Query: 1   GRGKVELKRIENTTSRQVTFSKRRNGLLKKAFELSILCDAEVALVIISPTDKRFQFSSHD 180
           GRGKVELKRIEN+ SRQVTFSKRRNGLLKKAFELSILC+AEV+L+I SP+ K +QFSSHD
Sbjct: 2   GRGKVELKRIENSASRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPSGKFYQFSSHD 61

Query: 181 IGRTIERYRSEVAGLPQPSDQSSRSVESW 267
           + R++ RYRSEV GLP  +DQ SRS+E W
Sbjct: 62  MERSVARYRSEV-GLPGTNDQRSRSLEFW 89


>gb|ABV23568.1| MADS-box protein [Populus deltoides]
          Length = 203

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/89 (75%), Positives = 78/89 (87%)
 Frame = +1

Query: 1   GRGKVELKRIENTTSRQVTFSKRRNGLLKKAFELSILCDAEVALVIISPTDKRFQFSSHD 180
           GRGKVELKRIEN+ SRQVTFSKRRNGLLKKAFELSILC+AEV+L+I SP+ K +QFSSHD
Sbjct: 2   GRGKVELKRIENSASRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPSGKFYQFSSHD 61

Query: 181 IGRTIERYRSEVAGLPQPSDQSSRSVESW 267
           + R++ RYRSEV GLP  +DQ SRS+E W
Sbjct: 62  MERSVARYRSEV-GLPGTNDQRSRSLEFW 89


>ref|XP_002318140.1| predicted protein [Populus trichocarpa] gi|222858813|gb|EEE96360.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  130 bits (328), Expect = 9e-29
 Identities = 66/89 (74%), Positives = 76/89 (85%)
 Frame = +1

Query: 1   GRGKVELKRIENTTSRQVTFSKRRNGLLKKAFELSILCDAEVALVIISPTDKRFQFSSHD 180
           GRGKVELKRIEN T RQVTFSKRRNGLLKKAFELSILCDAEV+L++ SPT K +QF+SH+
Sbjct: 2   GRGKVELKRIENPTRRQVTFSKRRNGLLKKAFELSILCDAEVSLIVFSPTGKFYQFASHE 61

Query: 181 IGRTIERYRSEVAGLPQPSDQSSRSVESW 267
           + RTI RYRSE AGL  P+D  +RS+E W
Sbjct: 62  MERTIARYRSE-AGLSGPNDSHTRSLEFW 89


>emb|CAL36573.1| deficiens H7 homologue [Misopates orontium]
          Length = 204

 Score =  128 bits (321), Expect = 6e-28
 Identities = 64/89 (71%), Positives = 75/89 (84%)
 Frame = +1

Query: 1   GRGKVELKRIENTTSRQVTFSKRRNGLLKKAFELSILCDAEVALVIISPTDKRFQFSSHD 180
           GRGKVELKRIEN T+RQVTFSKRRNGLLKKAFELS+LCDAEVA++I SP+ K +Q++SHD
Sbjct: 2   GRGKVELKRIENPTNRQVTFSKRRNGLLKKAFELSVLCDAEVAVLIFSPSGKAYQYASHD 61

Query: 181 IGRTIERYRSEVAGLPQPSDQSSRSVESW 267
             RTI RY+SEV GL +P DQ   S+E W
Sbjct: 62  THRTIARYKSEV-GLAKPGDQGITSMEVW 89


>emb|CAC44080.1| putative MADS-domain transcription factor DEFH7 [Antirrhinum majus]
          Length = 206

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/89 (70%), Positives = 75/89 (84%)
 Frame = +1

Query: 1   GRGKVELKRIENTTSRQVTFSKRRNGLLKKAFELSILCDAEVALVIISPTDKRFQFSSHD 180
           GRGKVELKRIEN T+RQVTFSKRRNGLLKKAFELS+LCDAEVA++I SP+ K +Q++SHD
Sbjct: 2   GRGKVELKRIENPTNRQVTFSKRRNGLLKKAFELSVLCDAEVAVLIFSPSGKAYQYASHD 61

Query: 181 IGRTIERYRSEVAGLPQPSDQSSRSVESW 267
             RTI RY+SEV G+ +P DQ   S+E W
Sbjct: 62  THRTIARYKSEV-GITKPGDQGITSMEVW 89


Top