BLASTX nr result

ID: Coptis25_contig00034623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034623
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37547.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_002274676.1| PREDICTED: DUF246 domain-containing protein ...    60   1e-07

>emb|CBI37547.3| unnamed protein product [Vitis vinifera]
          Length = 499

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/77 (46%), Positives = 48/77 (62%)
 Frame = +1

Query: 70  MVNSGSRSFPHPRNSTRSNNKLYLIIMKPTLFSITVYISLLFGFSIFVFIFSTRQILQNH 249
           MVNS  R + H R S+ S      +  KPTL++ITVYI LLF FSI +F+F TR +L++ 
Sbjct: 1   MVNS--RGYSHSRASSTSK----FLPRKPTLYTITVYIILLFAFSIVIFLFYTRDVLEDE 54

Query: 250 PKLFLSNDSHSLQMLDK 300
            K   S DS  +QM D+
Sbjct: 55  QKPLSSEDSQFVQMQDE 71


>ref|XP_002274676.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
           vinifera]
          Length = 451

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/76 (46%), Positives = 47/76 (61%)
 Frame = +1

Query: 70  MVNSGSRSFPHPRNSTRSNNKLYLIIMKPTLFSITVYISLLFGFSIFVFIFSTRQILQNH 249
           MVNS  R + H R S+ S      +  KPTL++ITVYI LLF FSI +F+F TR +L++ 
Sbjct: 1   MVNS--RGYSHSRASSTSK----FLPRKPTLYTITVYIILLFAFSIVIFLFYTRDVLEDE 54

Query: 250 PKLFLSNDSHSLQMLD 297
            K   S DS  +Q+ D
Sbjct: 55  QKPLSSEDSQFVQISD 70


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