BLASTX nr result

ID: Coptis25_contig00034618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034618
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635244.1| PREDICTED: UPF0361 protein C3orf37 homolog [...    84   1e-31
emb|CAN82703.1| hypothetical protein VITISV_026469 [Vitis vinifera]    84   1e-31
ref|XP_003532247.1| PREDICTED: UPF0361 protein C3orf37 homolog [...    83   1e-30
gb|AAC14496.1| hypothetical protein [Arabidopsis thaliana]             83   3e-30
ref|NP_180215.2| uncharacterized protein [Arabidopsis thaliana] ...    83   3e-30

>ref|XP_003635244.1| PREDICTED: UPF0361 protein C3orf37 homolog [Vitis vinifera]
           gi|296090568|emb|CBI40918.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score = 83.6 bits (205), Expect(2) = 1e-31
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = +3

Query: 270 KSIVTVEGFYEWKKDGSNKQPFYIHLKNGQPLVFAALYDSWVNSE 404
           + +V VEGFYEWKKDGS KQP+YIHLK+G+PLVFAAL+DSW NSE
Sbjct: 106 RCLVAVEGFYEWKKDGSKKQPYYIHLKDGRPLVFAALFDSWANSE 150



 Score = 78.2 bits (191), Expect(2) = 1e-31
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = +2

Query: 2   YRPRYNVSPGSYMPVVRRCHGQVQGGVALHCMKWGLVPSFTKKTDKVDHYKM 157
           YRP YNVSPG+ +PVVRR  G       +HCMKWGLVPSFTKK++K DHYKM
Sbjct: 33  YRPSYNVSPGANLPVVRRGGGTEGEEAIVHCMKWGLVPSFTKKSEKPDHYKM 84


>emb|CAN82703.1| hypothetical protein VITISV_026469 [Vitis vinifera]
          Length = 370

 Score = 83.6 bits (205), Expect(2) = 1e-31
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = +3

Query: 270 KSIVTVEGFYEWKKDGSNKQPFYIHLKNGQPLVFAALYDSWVNSE 404
           + +V VEGFYEWKKDGS KQP+YIHLK+G+PLVFAAL+DSW NSE
Sbjct: 106 RCLVAVEGFYEWKKDGSKKQPYYIHLKDGRPLVFAALFDSWANSE 150



 Score = 78.2 bits (191), Expect(2) = 1e-31
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = +2

Query: 2   YRPRYNVSPGSYMPVVRRCHGQVQGGVALHCMKWGLVPSFTKKTDKVDHYKM 157
           YRP YNVSPG+ +PVVRR  G       +HCMKWGLVPSFTKK++K DHYKM
Sbjct: 33  YRPSYNVSPGANLPVVRRGGGTEGEEAIVHCMKWGLVPSFTKKSEKPDHYKM 84


>ref|XP_003532247.1| PREDICTED: UPF0361 protein C3orf37 homolog [Glycine max]
          Length = 382

 Score = 82.8 bits (203), Expect(2) = 1e-30
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +3

Query: 270 KSIVTVEGFYEWKKDGSNKQPFYIHLKNGQPLVFAALYDSWVNSE 404
           + +V VEGFYEWKKDGS KQP+YIH K+G+PLVFAALYDSW NSE
Sbjct: 106 RCLVAVEGFYEWKKDGSKKQPYYIHFKDGRPLVFAALYDSWQNSE 150



 Score = 75.5 bits (184), Expect(2) = 1e-30
 Identities = 34/52 (65%), Positives = 38/52 (73%)
 Frame = +2

Query: 2   YRPRYNVSPGSYMPVVRRCHGQVQGGVALHCMKWGLVPSFTKKTDKVDHYKM 157
           YRP YNVSPG  +PVVRR       G  L CMKWGL+PSFTKKT+K DHY+M
Sbjct: 33  YRPAYNVSPGFDVPVVRRDDASGGEGYVLQCMKWGLIPSFTKKTEKPDHYRM 84


>gb|AAC14496.1| hypothetical protein [Arabidopsis thaliana]
          Length = 517

 Score = 83.2 bits (204), Expect(2) = 3e-30
 Identities = 38/53 (71%), Positives = 45/53 (84%), Gaps = 1/53 (1%)
 Frame = +2

Query: 2   YRPRYNVSPGSYMPVVRRCHGQVQG-GVALHCMKWGLVPSFTKKTDKVDHYKM 157
           YRP YNV+PGSY+PV+RR + +V G GV +HCMKWGLVPSFTKKTDK D +KM
Sbjct: 63  YRPSYNVAPGSYIPVLRRDNEEVVGDGVVVHCMKWGLVPSFTKKTDKPDFFKM 115



 Score = 73.9 bits (180), Expect(2) = 3e-30
 Identities = 29/44 (65%), Positives = 39/44 (88%)
 Frame = +3

Query: 270 KSIVTVEGFYEWKKDGSNKQPFYIHLKNGQPLVFAALYDSWVNS 401
           + +V V+GFYEWKK+GS KQP+YIH ++G+PLVFAAL+D+W NS
Sbjct: 137 RCLVAVDGFYEWKKEGSKKQPYYIHFEDGRPLVFAALFDTWQNS 180


>ref|NP_180215.2| uncharacterized protein [Arabidopsis thaliana]
           gi|26449484|dbj|BAC41868.1| unknown protein [Arabidopsis
           thaliana] gi|29028900|gb|AAO64829.1| At2g26470
           [Arabidopsis thaliana] gi|330252748|gb|AEC07842.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 487

 Score = 83.2 bits (204), Expect(2) = 3e-30
 Identities = 38/53 (71%), Positives = 45/53 (84%), Gaps = 1/53 (1%)
 Frame = +2

Query: 2   YRPRYNVSPGSYMPVVRRCHGQVQG-GVALHCMKWGLVPSFTKKTDKVDHYKM 157
           YRP YNV+PGSY+PV+RR + +V G GV +HCMKWGLVPSFTKKTDK D +KM
Sbjct: 33  YRPSYNVAPGSYIPVLRRDNEEVVGDGVVVHCMKWGLVPSFTKKTDKPDFFKM 85



 Score = 73.9 bits (180), Expect(2) = 3e-30
 Identities = 29/44 (65%), Positives = 39/44 (88%)
 Frame = +3

Query: 270 KSIVTVEGFYEWKKDGSNKQPFYIHLKNGQPLVFAALYDSWVNS 401
           + +V V+GFYEWKK+GS KQP+YIH ++G+PLVFAAL+D+W NS
Sbjct: 107 RCLVAVDGFYEWKKEGSKKQPYYIHFEDGRPLVFAALFDTWQNS 150


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