BLASTX nr result

ID: Coptis25_contig00034613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034613
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263584.1| PREDICTED: uncharacterized protein LOC100250...   229   1e-58
ref|XP_002518443.1| conserved hypothetical protein [Ricinus comm...   216   2e-54
ref|XP_003547261.1| PREDICTED: uncharacterized protein LOC100798...   206   1e-51
ref|XP_002889903.1| hypothetical protein ARALYDRAFT_471341 [Arab...   202   2e-50
ref|NP_563896.1| uncharacterized protein [Arabidopsis thaliana] ...   201   7e-50

>ref|XP_002263584.1| PREDICTED: uncharacterized protein LOC100250418 [Vitis vinifera]
           gi|302144103|emb|CBI23208.3| unnamed protein product
           [Vitis vinifera]
          Length = 339

 Score =  229 bits (585), Expect = 1e-58
 Identities = 100/134 (74%), Positives = 118/134 (88%)
 Frame = -1

Query: 402 IWFVLISLFILPFLNIIAAQSSLCRTSCGDIPINYPLSIDDGCGSPYYRHMLVCSDTGKL 223
           ++F++++  I PFL + AAQ+SLCRTSCG IPINYP  IDDGCGSPYYRH+LVC D+G+L
Sbjct: 22  LFFLILTPLIFPFLTLTAAQASLCRTSCGGIPINYPFGIDDGCGSPYYRHILVCPDSGQL 81

Query: 222 EFRAPSGRYPVQNISYSDPHILVSDPFMWKCEDGDNFRPNRPFSLDTSTHFTLSTKNDYL 43
           E R PSGRYPV+++SYSDPHILVSDPFMW C+DGD FRP RPFSLDTSTHF+LS +NDYL
Sbjct: 82  ELRTPSGRYPVRSLSYSDPHILVSDPFMWNCQDGDAFRPTRPFSLDTSTHFSLSPQNDYL 141

Query: 42  FFNCSEKDVIIEPK 1
           FFNCSE DVI+EPK
Sbjct: 142 FFNCSEDDVIVEPK 155


>ref|XP_002518443.1| conserved hypothetical protein [Ricinus communis]
           gi|223542288|gb|EEF43830.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 340

 Score =  216 bits (549), Expect = 2e-54
 Identities = 98/134 (73%), Positives = 113/134 (84%), Gaps = 4/134 (2%)
 Frame = -1

Query: 390 LISLFI----LPFLNIIAAQSSLCRTSCGDIPINYPLSIDDGCGSPYYRHMLVCSDTGKL 223
           L+SLFI    LP  ++  AQ+S CRT CG IPINYP  IDDGCGSPYYRHMLVCSD+G L
Sbjct: 22  LVSLFIMLNTLPSFSLTTAQASHCRTFCGTIPINYPFGIDDGCGSPYYRHMLVCSDSGNL 81

Query: 222 EFRAPSGRYPVQNISYSDPHILVSDPFMWKCEDGDNFRPNRPFSLDTSTHFTLSTKNDYL 43
           EFR PSGRY V +ISYSDPHI+V+DPFMW C+DG +FR  RPFSLDTSTHFTLS++NDYL
Sbjct: 82  EFRTPSGRYQVHSISYSDPHIIVADPFMWNCQDGSHFRATRPFSLDTSTHFTLSSQNDYL 141

Query: 42  FFNCSEKDVIIEPK 1
           FFNCSE++VI+EPK
Sbjct: 142 FFNCSEENVIVEPK 155


>ref|XP_003547261.1| PREDICTED: uncharacterized protein LOC100798581 [Glycine max]
          Length = 326

 Score =  206 bits (525), Expect = 1e-51
 Identities = 90/133 (67%), Positives = 110/133 (82%)
 Frame = -1

Query: 399 WFVLISLFILPFLNIIAAQSSLCRTSCGDIPINYPLSIDDGCGSPYYRHMLVCSDTGKLE 220
           +F L+   I+   +   +QSSLCRTSCGDIPI YP  IDDGCGSPYYRH+L CS++GKLE
Sbjct: 10  FFALLETLIITS-STTTSQSSLCRTSCGDIPIKYPFGIDDGCGSPYYRHILQCSNSGKLE 68

Query: 219 FRAPSGRYPVQNISYSDPHILVSDPFMWKCEDGDNFRPNRPFSLDTSTHFTLSTKNDYLF 40
            R PSGRYPV+N+SYSDPH++V+DPFMW CEDG+ FRP RPFSLDT+THF LS +N+Y+F
Sbjct: 69  LRTPSGRYPVRNLSYSDPHVVVTDPFMWSCEDGEKFRPTRPFSLDTATHFKLSPQNEYMF 128

Query: 39  FNCSEKDVIIEPK 1
           FNCS+  VII+PK
Sbjct: 129 FNCSQDSVIIQPK 141


>ref|XP_002889903.1| hypothetical protein ARALYDRAFT_471341 [Arabidopsis lyrata subsp.
           lyrata] gi|297335745|gb|EFH66162.1| hypothetical protein
           ARALYDRAFT_471341 [Arabidopsis lyrata subsp. lyrata]
          Length = 329

 Score =  202 bits (514), Expect = 2e-50
 Identities = 90/133 (67%), Positives = 111/133 (83%), Gaps = 1/133 (0%)
 Frame = -1

Query: 396 FVLISLFILPFLNIIAAQSSLCRTSCGDIPINYPLSIDDGCGSPYYRHMLVCSDTG-KLE 220
           F  + + IL   +  ++QS+LCR+SCG+IPINYP SIDDGCGSPYYRHML+CSD   KLE
Sbjct: 10  FFFLLMAILLQSSTTSSQSNLCRSSCGNIPINYPFSIDDGCGSPYYRHMLICSDNNTKLE 69

Query: 219 FRAPSGRYPVQNISYSDPHILVSDPFMWKCEDGDNFRPNRPFSLDTSTHFTLSTKNDYLF 40
            R PSG+YPV++ISYSDPH+LVSDPFMW C+D DNFRP R FS+D+STHFT+S +NDYLF
Sbjct: 70  LRTPSGKYPVKSISYSDPHLLVSDPFMWNCQDRDNFRPTRSFSIDSSTHFTVSPQNDYLF 129

Query: 39  FNCSEKDVIIEPK 1
           FNC+ + VI+EPK
Sbjct: 130 FNCNTEKVIVEPK 142


>ref|NP_563896.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13507567|gb|AAK28646.1|AF360349_1 unknown protein
           [Arabidopsis thaliana] gi|3157936|gb|AAC17619.1|
           Contains similarity to NFATc3 gb|U28807 from Mus
           musculus [Arabidopsis thaliana]
           gi|15293303|gb|AAK93762.1| unknown protein [Arabidopsis
           thaliana] gi|332190693|gb|AEE28814.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 329

 Score =  201 bits (510), Expect = 7e-50
 Identities = 91/135 (67%), Positives = 112/135 (82%), Gaps = 1/135 (0%)
 Frame = -1

Query: 402 IWFVLISLFILPFLNIIAAQSSLCRTSCGDIPINYPLSIDDGCGSPYYRHMLVCSDTG-K 226
           I+F L+   +L   +  ++QS+LCR+SCG+IPINYP SIDDGCGSPYYRHML+CSD   K
Sbjct: 9   IFFSLLMTILLQS-STTSSQSNLCRSSCGNIPINYPFSIDDGCGSPYYRHMLICSDNDTK 67

Query: 225 LEFRAPSGRYPVQNISYSDPHILVSDPFMWKCEDGDNFRPNRPFSLDTSTHFTLSTKNDY 46
           LE R PSG+YPV++ISYSDPH+LVSDPFMW C+D DNFRP R FS+D+STHFT+S +NDY
Sbjct: 68  LELRTPSGKYPVKSISYSDPHLLVSDPFMWNCQDRDNFRPTRSFSIDSSTHFTVSPQNDY 127

Query: 45  LFFNCSEKDVIIEPK 1
           LFFNC+   VI+EPK
Sbjct: 128 LFFNCNTDKVIVEPK 142


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