BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034592
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317482.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat...   131   7e-29
ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat...   130   1e-28
emb|CBI20261.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat...   127   7e-28

>ref|XP_002317482.1| predicted protein [Populus trichocarpa] gi|222860547|gb|EEE98094.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  135 bits (341), Expect = 3e-30
 Identities = 68/114 (59%), Positives = 81/114 (71%)
 Frame = +3

Query: 3   VIDSLCFKKRIPQALEIFKEMKERGGCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXX 182
           VID+LCFKKR+P+AL +F+ MKERG C PNVATYNSLIKH+CKI R              
Sbjct: 217 VIDALCFKKRVPEALAVFEGMKERG-CIPNVATYNSLIKHMCKIGRMEKVYELLDEMQEK 275

Query: 183 XGSCTPNEITFICLLKAAKKPEEARGVLERMKRNDCRVAGDTYNMILKLFLDWN 344
            GSC P+EITF  LLK+ KKPEE  GVLERMK N C++  DT N++LKL  DW+
Sbjct: 276 KGSCMPDEITFNYLLKSLKKPEEVAGVLERMKINGCKMNNDTCNLLLKLHADWD 329


>ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Glycine max]
          Length = 481

 Score =  131 bits (329), Expect = 7e-29
 Identities = 64/118 (54%), Positives = 81/118 (68%)
 Frame = +3

Query: 3   VIDSLCFKKRIPQALEIFKEMKERGGCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXX 182
           +ID+LCFKKRIP+ALEIF +M ERG C PNVATYNSLIK++CKI R              
Sbjct: 283 IIDALCFKKRIPEALEIFCDMSERG-CEPNVATYNSLIKYMCKIQRMKKVYELVDEMERK 341

Query: 183 XGSCTPNEITFICLLKAAKKPEEARGVLERMKRNDCRVAGDTYNMILKLFLDWNDVQG 356
            GSC PN +T+  LLK+ K+P E   VLERM+RN C +  D YNM+L+L++ W+D  G
Sbjct: 342 KGSCLPNAVTYCYLLKSLKEPGEVCRVLERMERNGCGMNDDVYNMVLRLYMKWDDGDG 399


>ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
           gi|449502917|ref|XP_004161779.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g15200-like [Cucumis sativus]
          Length = 532

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/117 (54%), Positives = 82/117 (70%)
 Frame = +3

Query: 3   VIDSLCFKKRIPQALEIFKEMKERGGCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXX 182
           +ID+LCFKKRIP+ALEIFKEM ERG C  NVATYN+LIKHLCKI R              
Sbjct: 341 IIDALCFKKRIPEALEIFKEMNERG-CAANVATYNTLIKHLCKIRRMEKVNELLNEMEER 399

Query: 183 XGSCTPNEITFICLLKAAKKPEEARGVLERMKRNDCRVAGDTYNMILKLFLDWNDVQ 353
            GSC PN +TFI LL + + PEE   + +RM+R+ C++  D YN+IL+L++DW D+Q
Sbjct: 400 KGSCWPNSVTFIYLLGSVRGPEEVPVLFQRMERSGCKMTSDIYNLILRLYMDW-DIQ 455


>emb|CBI20261.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/113 (56%), Positives = 78/113 (69%)
 Frame = +3

Query: 3   VIDSLCFKKRIPQALEIFKEMKERGGCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXX 182
           +ID+LCFKKRIP+ALE+ +EM ER  C P+VATYNSLIKHLCKI R              
Sbjct: 298 IIDALCFKKRIPEALEVLREMNERD-CQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQK 356

Query: 183 XGSCTPNEITFICLLKAAKKPEEARGVLERMKRNDCRVAGDTYNMILKLFLDW 341
              C PN  T+  LLK+ KKPEE  G+LERM+RN CR+  D YN+ILKL++DW
Sbjct: 357 --GCLPNARTYGYLLKSTKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDW 407


>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Vitis vinifera]
          Length = 546

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/113 (56%), Positives = 78/113 (69%)
 Frame = +3

Query: 3   VIDSLCFKKRIPQALEIFKEMKERGGCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXX 182
           +ID+LCFKKRIP+ALE+ +EM ER  C P+VATYNSLIKHLCKI R              
Sbjct: 335 IIDALCFKKRIPEALEVLREMNERD-CQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQK 393

Query: 183 XGSCTPNEITFICLLKAAKKPEEARGVLERMKRNDCRVAGDTYNMILKLFLDW 341
              C PN  T+  LLK+ KKPEE  G+LERM+RN CR+  D YN+ILKL++DW
Sbjct: 394 --GCLPNARTYGYLLKSTKKPEEVPGILERMERNGCRMNSDCYNLILKLYMDW 444