BLASTX nr result
ID: Coptis25_contig00034554
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00034554 (553 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera] 162 4e-38 emb|CBI25024.3| unnamed protein product [Vitis vinifera] 159 3e-37 ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containi... 159 3e-37 ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containi... 154 1e-35 ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containi... 154 1e-35 >emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera] Length = 641 Score = 162 bits (409), Expect = 4e-38 Identities = 79/146 (54%), Positives = 104/146 (71%) Frame = -1 Query: 439 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 260 +V LQ LLQ A ++ EG H Q+ + GL+ DT+ SN+++NMYSKCG V+SAR++F Sbjct: 46 HVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLF 105 Query: 259 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVY 80 D MP RSLVSWNTM+G+HT++G+ ++ L LFMQMQ+E + SEFT+ V+ Sbjct: 106 DEMPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVF 165 Query: 79 ESKQLHAFALKIAFDSNVYVGTALLD 2 E KQLH FALK A DSNV+VGTALLD Sbjct: 166 ECKQLHGFALKTALDSNVFVGTALLD 191 Score = 80.5 bits (197), Expect = 2e-13 Identities = 43/135 (31%), Positives = 73/135 (54%) Frame = -1 Query: 406 CAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERSLVSW 227 CA V+E K LHG + L + + ++++Y+KCG V A VF+ MPERS V+W Sbjct: 158 CAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTW 217 Query: 226 NTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQLHAFALK 47 ++M+ + ++ +E L LF + Q + ++FT+ A+ E KQ+ A K Sbjct: 218 SSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCK 277 Query: 46 IAFDSNVYVGTALLD 2 SN++V ++L+D Sbjct: 278 TGIGSNIFVISSLID 292 Score = 63.9 bits (154), Expect = 2e-08 Identities = 30/105 (28%), Positives = 57/105 (54%) Frame = -1 Query: 439 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 260 N + + L CA + EGK + + + G+ + + + +I+MY+KCG ++ A VF Sbjct: 248 NQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVF 307 Query: 259 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFT 125 + E+++V WN M+ ++H E + F +MQ+ + P+E T Sbjct: 308 SSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEIT 352 >emb|CBI25024.3| unnamed protein product [Vitis vinifera] Length = 621 Score = 159 bits (402), Expect = 3e-37 Identities = 79/146 (54%), Positives = 103/146 (70%) Frame = -1 Query: 439 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 260 +V LQ LLQ A ++ EG H Q+ + GL+ DT+ SN+++NMYSKCG V+SAR++F Sbjct: 46 HVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLF 105 Query: 259 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVY 80 D MP RSLVSWNTM+G+HT++G+ ++ L LFMQMQ+E SEFT+ V+ Sbjct: 106 DEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVF 165 Query: 79 ESKQLHAFALKIAFDSNVYVGTALLD 2 E KQLH FALK A DSNV+VGTALLD Sbjct: 166 ECKQLHGFALKTALDSNVFVGTALLD 191 Score = 81.6 bits (200), Expect = 7e-14 Identities = 43/135 (31%), Positives = 74/135 (54%) Frame = -1 Query: 406 CAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERSLVSW 227 CA V+E K LHG + L + + ++++Y+KCG V A VF+ MPERS V+W Sbjct: 158 CAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTW 217 Query: 226 NTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQLHAFALK 47 ++M+ + ++ +E L LF + Q + ++FT+ A+ E KQ+ A + K Sbjct: 218 SSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCK 277 Query: 46 IAFDSNVYVGTALLD 2 SN++V ++L+D Sbjct: 278 TGIGSNIFVISSLID 292 Score = 60.8 bits (146), Expect = 1e-07 Identities = 28/105 (26%), Positives = 56/105 (53%) Frame = -1 Query: 439 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 260 N + + L CA + EGK + + G+ + + + +I+MY+KCG ++ A VF Sbjct: 248 NQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 307 Query: 259 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFT 125 + E+++V WN ++ ++H E + F +MQ+ + P++ T Sbjct: 308 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 352 >ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like [Vitis vinifera] Length = 594 Score = 159 bits (402), Expect = 3e-37 Identities = 79/146 (54%), Positives = 103/146 (70%) Frame = -1 Query: 439 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 260 +V LQ LLQ A ++ EG H Q+ + GL+ DT+ SN+++NMYSKCG V+SAR++F Sbjct: 19 HVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLF 78 Query: 259 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVY 80 D MP RSLVSWNTM+G+HT++G+ ++ L LFMQMQ+E SEFT+ V+ Sbjct: 79 DEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVF 138 Query: 79 ESKQLHAFALKIAFDSNVYVGTALLD 2 E KQLH FALK A DSNV+VGTALLD Sbjct: 139 ECKQLHGFALKTALDSNVFVGTALLD 164 Score = 81.6 bits (200), Expect = 7e-14 Identities = 43/135 (31%), Positives = 74/135 (54%) Frame = -1 Query: 406 CAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERSLVSW 227 CA V+E K LHG + L + + ++++Y+KCG V A VF+ MPERS V+W Sbjct: 131 CAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTW 190 Query: 226 NTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQLHAFALK 47 ++M+ + ++ +E L LF + Q + ++FT+ A+ E KQ+ A + K Sbjct: 191 SSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCK 250 Query: 46 IAFDSNVYVGTALLD 2 SN++V ++L+D Sbjct: 251 TGIGSNIFVISSLID 265 Score = 60.8 bits (146), Expect = 1e-07 Identities = 28/105 (26%), Positives = 56/105 (53%) Frame = -1 Query: 439 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 260 N + + L CA + EGK + + G+ + + + +I+MY+KCG ++ A VF Sbjct: 221 NQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 280 Query: 259 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFT 125 + E+++V WN ++ ++H E + F +MQ+ + P++ T Sbjct: 281 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 325 >ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like [Cucumis sativus] Length = 638 Score = 154 bits (388), Expect = 1e-35 Identities = 79/139 (56%), Positives = 98/139 (70%) Frame = -1 Query: 418 LLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERS 239 +L+ CA K++ +GK H Q+ GL+ D L SNI+INMYSKCG VD ARQVFD MP RS Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129 Query: 238 LVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQLHA 59 LVSWNTMIG+ T++GEE+E L+L +QMQRE P SEFT+ A+ E + LHA Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189 Query: 58 FALKIAFDSNVYVGTALLD 2 FA+K A D NV+V TALLD Sbjct: 190 FAIKAAMDLNVFVATALLD 208 Score = 75.1 bits (183), Expect = 7e-12 Identities = 37/142 (26%), Positives = 78/142 (54%) Frame = -1 Query: 427 LQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMP 248 + ++L CA + E ++LH +A + ++ ++ ++++Y+KCG + A VF+ MP Sbjct: 168 ISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP 227 Query: 247 ERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQ 68 +RS+V+W++M + ++ ++ L LF + + +F + A+ E KQ Sbjct: 228 DRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQ 287 Query: 67 LHAFALKIAFDSNVYVGTALLD 2 ++A K F SN++V ++L+D Sbjct: 288 VNALLSKSGFCSNIFVASSLID 309 Score = 58.5 bits (140), Expect = 7e-07 Identities = 28/101 (27%), Positives = 61/101 (60%) Frame = -1 Query: 427 LQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMP 248 + +++ CA + EGK ++ + ++G + +++ +I+MY+KCG ++ + +VF + Sbjct: 269 MSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVE 328 Query: 247 ERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFT 125 +R++V WN MI ++H E + LF +MQ+ + P++ T Sbjct: 329 KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369 >ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like [Cucumis sativus] Length = 638 Score = 154 bits (388), Expect = 1e-35 Identities = 79/139 (56%), Positives = 98/139 (70%) Frame = -1 Query: 418 LLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERS 239 +L+ CA K++ +GK H Q+ GL+ D L SNI+INMYSKCG VD ARQVFD MP RS Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129 Query: 238 LVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQLHA 59 LVSWNTMIG+ T++GEE+E L+L +QMQRE P SEFT+ A+ E + LHA Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189 Query: 58 FALKIAFDSNVYVGTALLD 2 FA+K A D NV+V TALLD Sbjct: 190 FAIKAAMDLNVFVATALLD 208 Score = 75.5 bits (184), Expect = 5e-12 Identities = 37/142 (26%), Positives = 78/142 (54%) Frame = -1 Query: 427 LQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMP 248 + ++L CA + E ++LH +A + ++ ++ ++++Y+KCG + A VF+ MP Sbjct: 168 ISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP 227 Query: 247 ERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQ 68 +RS+V+W++M + ++ ++ L LF + + +F + A+ E KQ Sbjct: 228 DRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQ 287 Query: 67 LHAFALKIAFDSNVYVGTALLD 2 ++A K F SN++V ++L+D Sbjct: 288 MNALLSKSGFCSNIFVASSLID 309 Score = 58.9 bits (141), Expect = 5e-07 Identities = 28/101 (27%), Positives = 61/101 (60%) Frame = -1 Query: 427 LQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMP 248 + +++ CA + EGK ++ + ++G + +++ +I+MY+KCG ++ + +VF + Sbjct: 269 MSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVE 328 Query: 247 ERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFT 125 +R++V WN MI ++H E + LF +MQ+ + P++ T Sbjct: 329 KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369