BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034554
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]   162   4e-38
emb|CBI25024.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containi...   159   3e-37
ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containi...   154   1e-35
ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containi...   154   1e-35

>emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
          Length = 641

 Score =  162 bits (409), Expect = 4e-38
 Identities = 79/146 (54%), Positives = 104/146 (71%)
 Frame = -1

Query: 439 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 260
           +V  LQ LLQ  A ++   EG   H Q+ + GL+ DT+ SN+++NMYSKCG V+SAR++F
Sbjct: 46  HVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLF 105

Query: 259 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVY 80
           D MP RSLVSWNTM+G+HT++G+ ++ L LFMQMQ+E +  SEFT+            V+
Sbjct: 106 DEMPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSEFTVSSVVCACAAKCCVF 165

Query: 79  ESKQLHAFALKIAFDSNVYVGTALLD 2
           E KQLH FALK A DSNV+VGTALLD
Sbjct: 166 ECKQLHGFALKTALDSNVFVGTALLD 191



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 43/135 (31%), Positives = 73/135 (54%)
 Frame = -1

Query: 406 CAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERSLVSW 227
           CA    V+E K LHG   +  L  +  +   ++++Y+KCG V  A  VF+ MPERS V+W
Sbjct: 158 CAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDASLVFECMPERSDVTW 217

Query: 226 NTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQLHAFALK 47
           ++M+  + ++   +E L LF + Q   +  ++FT+           A+ E KQ+ A   K
Sbjct: 218 SSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVLCK 277

Query: 46  IAFDSNVYVGTALLD 2
               SN++V ++L+D
Sbjct: 278 TGIGSNIFVISSLID 292



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/105 (28%), Positives = 57/105 (54%)
 Frame = -1

Query: 439 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 260
           N   + + L  CA    + EGK +   + + G+  +  + + +I+MY+KCG ++ A  VF
Sbjct: 248 NQFTISSALSACAARAALIEGKQVQAVLCKTGIGSNIFVISSLIDMYAKCGIIEEAYIVF 307

Query: 259 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFT 125
             + E+++V WN M+   ++H    E +  F +MQ+  + P+E T
Sbjct: 308 SSVEEKNVVLWNAMLSGFSRHVRSLEAMIYFEKMQQMGICPNEIT 352


>emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  159 bits (402), Expect = 3e-37
 Identities = 79/146 (54%), Positives = 103/146 (70%)
 Frame = -1

Query: 439 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 260
           +V  LQ LLQ  A ++   EG   H Q+ + GL+ DT+ SN+++NMYSKCG V+SAR++F
Sbjct: 46  HVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLF 105

Query: 259 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVY 80
           D MP RSLVSWNTM+G+HT++G+ ++ L LFMQMQ+E    SEFT+            V+
Sbjct: 106 DEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVF 165

Query: 79  ESKQLHAFALKIAFDSNVYVGTALLD 2
           E KQLH FALK A DSNV+VGTALLD
Sbjct: 166 ECKQLHGFALKTALDSNVFVGTALLD 191



 Score = 81.6 bits (200), Expect = 7e-14
 Identities = 43/135 (31%), Positives = 74/135 (54%)
 Frame = -1

Query: 406 CAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERSLVSW 227
           CA    V+E K LHG   +  L  +  +   ++++Y+KCG V  A  VF+ MPERS V+W
Sbjct: 158 CAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTW 217

Query: 226 NTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQLHAFALK 47
           ++M+  + ++   +E L LF + Q   +  ++FT+           A+ E KQ+ A + K
Sbjct: 218 SSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCK 277

Query: 46  IAFDSNVYVGTALLD 2
               SN++V ++L+D
Sbjct: 278 TGIGSNIFVISSLID 292



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/105 (26%), Positives = 56/105 (53%)
 Frame = -1

Query: 439 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 260
           N   + + L  CA    + EGK +     + G+  +  + + +I+MY+KCG ++ A  VF
Sbjct: 248 NQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 307

Query: 259 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFT 125
             + E+++V WN ++   ++H    E +  F +MQ+  + P++ T
Sbjct: 308 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 352


>ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  159 bits (402), Expect = 3e-37
 Identities = 79/146 (54%), Positives = 103/146 (70%)
 Frame = -1

Query: 439 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 260
           +V  LQ LLQ  A ++   EG   H Q+ + GL+ DT+ SN+++NMYSKCG V+SAR++F
Sbjct: 19  HVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLF 78

Query: 259 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVY 80
           D MP RSLVSWNTM+G+HT++G+ ++ L LFMQMQ+E    SEFT+            V+
Sbjct: 79  DEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVF 138

Query: 79  ESKQLHAFALKIAFDSNVYVGTALLD 2
           E KQLH FALK A DSNV+VGTALLD
Sbjct: 139 ECKQLHGFALKTALDSNVFVGTALLD 164



 Score = 81.6 bits (200), Expect = 7e-14
 Identities = 43/135 (31%), Positives = 74/135 (54%)
 Frame = -1

Query: 406 CAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERSLVSW 227
           CA    V+E K LHG   +  L  +  +   ++++Y+KCG V  A  VF+ MPERS V+W
Sbjct: 131 CAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTW 190

Query: 226 NTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQLHAFALK 47
           ++M+  + ++   +E L LF + Q   +  ++FT+           A+ E KQ+ A + K
Sbjct: 191 SSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCK 250

Query: 46  IAFDSNVYVGTALLD 2
               SN++V ++L+D
Sbjct: 251 TGIGSNIFVISSLID 265



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/105 (26%), Positives = 56/105 (53%)
 Frame = -1

Query: 439 NVVNLQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVF 260
           N   + + L  CA    + EGK +     + G+  +  + + +I+MY+KCG ++ A  VF
Sbjct: 221 NQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVF 280

Query: 259 DRMPERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFT 125
             + E+++V WN ++   ++H    E +  F +MQ+  + P++ T
Sbjct: 281 SSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 325


>ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  154 bits (388), Expect = 1e-35
 Identities = 79/139 (56%), Positives = 98/139 (70%)
 Frame = -1

Query: 418 LLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERS 239
           +L+ CA  K++ +GK  H Q+   GL+ D L SNI+INMYSKCG VD ARQVFD MP RS
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 238 LVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQLHA 59
           LVSWNTMIG+ T++GEE+E L+L +QMQRE  P SEFT+           A+ E + LHA
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 58  FALKIAFDSNVYVGTALLD 2
           FA+K A D NV+V TALLD
Sbjct: 190 FAIKAAMDLNVFVATALLD 208



 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 37/142 (26%), Positives = 78/142 (54%)
 Frame = -1

Query: 427 LQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMP 248
           + ++L  CA    + E ++LH    +A + ++  ++  ++++Y+KCG +  A  VF+ MP
Sbjct: 168 ISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP 227

Query: 247 ERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQ 68
           +RS+V+W++M   + ++   ++ L LF +     +   +F +           A+ E KQ
Sbjct: 228 DRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQ 287

Query: 67  LHAFALKIAFDSNVYVGTALLD 2
           ++A   K  F SN++V ++L+D
Sbjct: 288 VNALLSKSGFCSNIFVASSLID 309



 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 28/101 (27%), Positives = 61/101 (60%)
 Frame = -1

Query: 427 LQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMP 248
           + +++  CA    + EGK ++  + ++G   +  +++ +I+MY+KCG ++ + +VF  + 
Sbjct: 269 MSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVE 328

Query: 247 ERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFT 125
           +R++V WN MI   ++H    E + LF +MQ+  + P++ T
Sbjct: 329 KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369


>ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  154 bits (388), Expect = 1e-35
 Identities = 79/139 (56%), Positives = 98/139 (70%)
 Frame = -1

Query: 418 LLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMPERS 239
           +L+ CA  K++ +GK  H Q+   GL+ D L SNI+INMYSKCG VD ARQVFD MP RS
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 238 LVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQLHA 59
           LVSWNTMIG+ T++GEE+E L+L +QMQRE  P SEFT+           A+ E + LHA
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 58  FALKIAFDSNVYVGTALLD 2
           FA+K A D NV+V TALLD
Sbjct: 190 FAIKAAMDLNVFVATALLD 208



 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 37/142 (26%), Positives = 78/142 (54%)
 Frame = -1

Query: 427 LQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMP 248
           + ++L  CA    + E ++LH    +A + ++  ++  ++++Y+KCG +  A  VF+ MP
Sbjct: 168 ISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP 227

Query: 247 ERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFTLXXXXXXXXXXXAVYESKQ 68
           +RS+V+W++M   + ++   ++ L LF +     +   +F +           A+ E KQ
Sbjct: 228 DRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQ 287

Query: 67  LHAFALKIAFDSNVYVGTALLD 2
           ++A   K  F SN++V ++L+D
Sbjct: 288 MNALLSKSGFCSNIFVASSLID 309



 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 28/101 (27%), Positives = 61/101 (60%)
 Frame = -1

Query: 427 LQALLQKCAVDKIVWEGKVLHGQVFQAGLQVDTLLSNIIINMYSKCGFVDSARQVFDRMP 248
           + +++  CA    + EGK ++  + ++G   +  +++ +I+MY+KCG ++ + +VF  + 
Sbjct: 269 MSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVE 328

Query: 247 ERSLVSWNTMIGAHTKHGEEDEGLNLFMQMQREQVPPSEFT 125
           +R++V WN MI   ++H    E + LF +MQ+  + P++ T
Sbjct: 329 KRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369