BLASTX nr result
ID: Coptis25_contig00034546
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00034546 (650 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAF02667.1| lipid transfer protein [Beta vulgaris] gi|111154... 64 2e-08 gb|AAA21437.1| lipid transfer protein [Nicotiana tabacum] 64 3e-08 gb|AAF65316.1|AF233297_1 lipid transfer protein [Nicotiana tabacum] 64 3e-08 ref|XP_003521806.1| PREDICTED: probable non-specific lipid-trans... 58 1e-06 gb|AAA21438.1| lipid transfer protein [Nicotiana tabacum] 57 4e-06 >dbj|BAF02667.1| lipid transfer protein [Beta vulgaris] gi|111154053|dbj|BAF02670.1| lipid transfer protein [Beta vulgaris] Length = 130 Score = 63.9 bits (154), Expect = 2e-08 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 5/124 (4%) Frame = -1 Query: 635 LQSTFEHDLSCSGFCDGIVDAGSASKAYDLAPVECSSVEQSLMPCFPYLQNTMPNPSNEC 456 + TF LS + +A + AP CS+V ++ C P++ +T P+PS C Sbjct: 1 MAKTFPEFLSYLAILSMLFAPSLCDQATETAP-SCSTVISNVAACLPFISHTSPSPSGIC 59 Query: 455 CQGITVVAS-----ENMMAVCMCIKSAMIDRXXXXXXXXXXXXLPQTCGMNFMMPPISKT 291 C G+ VA ++ MA+C C+K+ + + LP+ C +N +PPISK Sbjct: 60 CGGVKNVAGLAKTHDDKMAICNCLKTELAN---IKYDPALVAALPKQCSVNINLPPISKN 116 Query: 290 MNCS 279 +CS Sbjct: 117 TDCS 120 >gb|AAA21437.1| lipid transfer protein [Nicotiana tabacum] Length = 120 Score = 63.5 bits (153), Expect = 3e-08 Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Frame = -1 Query: 545 APVECSSVEQSLMPCFPYLQNTMP---NPSNECCQGITVV-----ASENMMAVCMCIKSA 390 AP C +V L PC Y+QN + NPS CC GI + E+ +A+C C+K+A Sbjct: 21 APPSCQTVTTQLAPCLSYIQNRVKGGGNPSVPCCTGINNIYELAKTKEDRVAICNCLKNA 80 Query: 389 MIDRXXXXXXXXXXXXLPQTCGMNFMMPPISKTMNCS 279 I P+ CG++F MPPI K +C+ Sbjct: 81 FIHAGNVNPTLVAEL--PKKCGISFNMPPIDKNYDCN 115 >gb|AAF65316.1|AF233297_1 lipid transfer protein [Nicotiana tabacum] Length = 116 Score = 63.5 bits (153), Expect = 3e-08 Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Frame = -1 Query: 545 APVECSSVEQSLMPCFPYLQNTMP---NPSNECCQGITVV-----ASENMMAVCMCIKSA 390 AP C +V L PC Y+QN + NPS CC GI + E+ +A+C C+K+A Sbjct: 21 APPSCQTVTTQLAPCLSYIQNRVKGGGNPSVPCCTGINNIYELAKTKEDRVAICNCLKNA 80 Query: 389 MIDRXXXXXXXXXXXXLPQTCGMNFMMPPISKTMNCS 279 I P+ CG++F MPPI K +C+ Sbjct: 81 FIHAGNVNPTLVAEL--PKKCGISFNMPPIDKNYDCN 115 >ref|XP_003521806.1| PREDICTED: probable non-specific lipid-transfer protein 1-like [Glycine max] Length = 118 Score = 58.2 bits (139), Expect = 1e-06 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 5/95 (5%) Frame = -1 Query: 548 LAPVECSSVEQSLMPCFPYLQNTMPNPSNECCQGITVVASE-----NMMAVCMCIKSAMI 384 LA + C++V + + PC +LQ PS CC GI ++ E N A+C C+K + Sbjct: 20 LASISCATVIEEVAPCTSFLQGGSKQPSVACCNGIKKLSGEAGTHQNRTAICQCLKEGL- 78 Query: 383 DRXXXXXXXXXXXXLPQTCGMNFMMPPISKTMNCS 279 +P+ CG++ +PPI K +CS Sbjct: 79 -ATIGNYDPKRVPQVPKDCGLSATLPPIDKNTDCS 112 >gb|AAA21438.1| lipid transfer protein [Nicotiana tabacum] Length = 118 Score = 56.6 bits (135), Expect = 4e-06 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Frame = -1 Query: 545 APVECSSVEQSLMPCFPYLQNTMPNPSNECCQGITVV-----ASENMMAVCMCIKSAMID 381 AP C +V L PC Y+Q +PS CC GI + E+ +A+C C+K+A Sbjct: 23 APPSCPTVTTQLAPCLSYIQGG-GDPSVPCCTGINNIYELAKTKEDRVAICNCLKTAFTH 81 Query: 380 RXXXXXXXXXXXXLPQTCGMNFMMPPISKTMNCS 279 P+ CG++F MPPI K +C+ Sbjct: 82 AGNVNPTLVAQL--PKKCGISFNMPPIDKNYDCN 113