BLASTX nr result

ID: Coptis25_contig00034546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034546
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF02667.1| lipid transfer protein [Beta vulgaris] gi|111154...    64   2e-08
gb|AAA21437.1| lipid transfer protein [Nicotiana tabacum]              64   3e-08
gb|AAF65316.1|AF233297_1 lipid transfer protein [Nicotiana tabacum]    64   3e-08
ref|XP_003521806.1| PREDICTED: probable non-specific lipid-trans...    58   1e-06
gb|AAA21438.1| lipid transfer protein [Nicotiana tabacum]              57   4e-06

>dbj|BAF02667.1| lipid transfer protein [Beta vulgaris] gi|111154053|dbj|BAF02670.1|
           lipid transfer protein [Beta vulgaris]
          Length = 130

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
 Frame = -1

Query: 635 LQSTFEHDLSCSGFCDGIVDAGSASKAYDLAPVECSSVEQSLMPCFPYLQNTMPNPSNEC 456
           +  TF   LS       +       +A + AP  CS+V  ++  C P++ +T P+PS  C
Sbjct: 1   MAKTFPEFLSYLAILSMLFAPSLCDQATETAP-SCSTVISNVAACLPFISHTSPSPSGIC 59

Query: 455 CQGITVVAS-----ENMMAVCMCIKSAMIDRXXXXXXXXXXXXLPQTCGMNFMMPPISKT 291
           C G+  VA      ++ MA+C C+K+ + +             LP+ C +N  +PPISK 
Sbjct: 60  CGGVKNVAGLAKTHDDKMAICNCLKTELAN---IKYDPALVAALPKQCSVNINLPPISKN 116

Query: 290 MNCS 279
            +CS
Sbjct: 117 TDCS 120


>gb|AAA21437.1| lipid transfer protein [Nicotiana tabacum]
          Length = 120

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
 Frame = -1

Query: 545 APVECSSVEQSLMPCFPYLQNTMP---NPSNECCQGITVV-----ASENMMAVCMCIKSA 390
           AP  C +V   L PC  Y+QN +    NPS  CC GI  +       E+ +A+C C+K+A
Sbjct: 21  APPSCQTVTTQLAPCLSYIQNRVKGGGNPSVPCCTGINNIYELAKTKEDRVAICNCLKNA 80

Query: 389 MIDRXXXXXXXXXXXXLPQTCGMNFMMPPISKTMNCS 279
            I               P+ CG++F MPPI K  +C+
Sbjct: 81  FIHAGNVNPTLVAEL--PKKCGISFNMPPIDKNYDCN 115


>gb|AAF65316.1|AF233297_1 lipid transfer protein [Nicotiana tabacum]
          Length = 116

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
 Frame = -1

Query: 545 APVECSSVEQSLMPCFPYLQNTMP---NPSNECCQGITVV-----ASENMMAVCMCIKSA 390
           AP  C +V   L PC  Y+QN +    NPS  CC GI  +       E+ +A+C C+K+A
Sbjct: 21  APPSCQTVTTQLAPCLSYIQNRVKGGGNPSVPCCTGINNIYELAKTKEDRVAICNCLKNA 80

Query: 389 MIDRXXXXXXXXXXXXLPQTCGMNFMMPPISKTMNCS 279
            I               P+ CG++F MPPI K  +C+
Sbjct: 81  FIHAGNVNPTLVAEL--PKKCGISFNMPPIDKNYDCN 115


>ref|XP_003521806.1| PREDICTED: probable non-specific lipid-transfer protein 1-like
           [Glycine max]
          Length = 118

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
 Frame = -1

Query: 548 LAPVECSSVEQSLMPCFPYLQNTMPNPSNECCQGITVVASE-----NMMAVCMCIKSAMI 384
           LA + C++V + + PC  +LQ     PS  CC GI  ++ E     N  A+C C+K  + 
Sbjct: 20  LASISCATVIEEVAPCTSFLQGGSKQPSVACCNGIKKLSGEAGTHQNRTAICQCLKEGL- 78

Query: 383 DRXXXXXXXXXXXXLPQTCGMNFMMPPISKTMNCS 279
                         +P+ CG++  +PPI K  +CS
Sbjct: 79  -ATIGNYDPKRVPQVPKDCGLSATLPPIDKNTDCS 112


>gb|AAA21438.1| lipid transfer protein [Nicotiana tabacum]
          Length = 118

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
 Frame = -1

Query: 545 APVECSSVEQSLMPCFPYLQNTMPNPSNECCQGITVV-----ASENMMAVCMCIKSAMID 381
           AP  C +V   L PC  Y+Q    +PS  CC GI  +       E+ +A+C C+K+A   
Sbjct: 23  APPSCPTVTTQLAPCLSYIQGG-GDPSVPCCTGINNIYELAKTKEDRVAICNCLKTAFTH 81

Query: 380 RXXXXXXXXXXXXLPQTCGMNFMMPPISKTMNCS 279
                         P+ CG++F MPPI K  +C+
Sbjct: 82  AGNVNPTLVAQL--PKKCGISFNMPPIDKNYDCN 113


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