BLASTX nr result

ID: Coptis25_contig00034534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034534
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534978.1| PREDICTED: LOW QUALITY PROTEIN: probable pec...   181   2e-43
ref|XP_002277293.2| PREDICTED: probable pectinesterase/pectinest...   175   1e-41
ref|XP_002326315.1| predicted protein [Populus trichocarpa] gi|2...   175   1e-41
ref|XP_002516196.1| Pectinesterase-2 precursor, putative [Ricinu...   164   1e-38
ref|NP_197586.1| Putative pectinesterase/pectinesterase inhibito...   126   5e-27

>ref|XP_003534978.1| PREDICTED: LOW QUALITY PROTEIN: probable
           pectinesterase/pectinesterase inhibitor 54-like [Glycine
           max]
          Length = 514

 Score =  181 bits (458), Expect = 2e-43
 Identities = 107/221 (48%), Positives = 142/221 (64%), Gaps = 13/221 (5%)
 Frame = +2

Query: 110 KHHQMQCGFTRYPQQCVETLSGLGVGQSDADILI-AMVEKLRNETMMLTPSNPHYQFQSL 286
           +H   +C  TRYP  C ETL  LG+G  + D  I A+V K   ET +  PS+   +F++ 
Sbjct: 11  EHAHNECNLTRYPNLCAETLMELGLGNQNVDNNIEALVNKTIFETSL--PSSYFAEFKTG 68

Query: 287 NNQHAHASSMGNCFELMNMSLRRLDQSLLALKSTSSRKRKQDIQTWLSAVVTFQSSCQDV 466
             Q AH+     C ELM+MSL+RLDQSL ALKS   ++   DIQTWLSA +TFQ SC+D 
Sbjct: 69  EAQPAHSVVADYCEELMSMSLKRLDQSLRALKSP--KRNTNDIQTWLSASLTFQQSCKDH 126

Query: 467 VNGHS------DDLVGKISGKMDYLSYLASNTLALVNQMGRDQKSTMSND------EFPR 610
           V+ H+      D L+ ++S KMDYLS L SN+LALVNQM       + ++      EFP 
Sbjct: 127 VHAHTSTLSTDDHLMERMSNKMDYLSQLGSNSLALVNQMSTTTSHNIGDNNNEKEHEFPI 186

Query: 611 WMPAKNRKLLQTIPVEANAVVAKDGSGDYMSVSEAIQAASG 733
           W+ +K RKLLQ   ++ANA+VA+DGSG+Y +VSEAI+AASG
Sbjct: 187 WVSSKGRKLLQGATIKANAIVAQDGSGNYKTVSEAIEAASG 227


>ref|XP_002277293.2| PREDICTED: probable pectinesterase/pectinesterase inhibitor 54-like
           [Vitis vinifera]
          Length = 506

 Score =  175 bits (443), Expect = 1e-41
 Identities = 100/222 (45%), Positives = 147/222 (66%), Gaps = 11/222 (4%)
 Frame = +2

Query: 110 KHHQMQCGFTRYPQQCVETLSGLGVGQSDADILIAMVEKLRNETMMLTPSNPHYQFQSLN 289
           K  Q +CGFT YP+ CV+TL  LG+G S  DI   +V K+ +ET + T +   + +Q L 
Sbjct: 7   KRVQSECGFTTYPKLCVQTL--LGLGHSKVDIPFVLVNKILSETRLPTSNIAKFSYQ-LA 63

Query: 290 NQHAHASSM--GNCFELMNMSLRRLDQSLLALKSTSSRKRKQDIQTWLSAVVTFQSSCQD 463
              AH++ +   +C  LM+MSL++L+QSLLALK  S+RK K DIQTWLSA +TFQ +C+D
Sbjct: 64  TPEAHSAHLVRDSCDMLMSMSLKQLNQSLLALKE-SARKNKHDIQTWLSAALTFQQTCKD 122

Query: 464 V---VNGHSDDLVGKISGKMDYLSYLASNTLALVNQMGRDQKSTMSN------DEFPRWM 616
           +   +  +    + +IS KMD+LS L +N LA++N++    K T S         FP W+
Sbjct: 123 LAVEMTRYFGTSMVQISSKMDHLSQLTNNALAVINRITPGPKKTTSGRGLSEEQVFPSWV 182

Query: 617 PAKNRKLLQTIPVEANAVVAKDGSGDYMSVSEAIQAASGARF 742
             ++RKLLQT  ++ANA+VA+DG+G+Y ++S+AIQAA+G RF
Sbjct: 183 SPRDRKLLQTTTIKANAIVAQDGTGNYETISDAIQAATGKRF 224


>ref|XP_002326315.1| predicted protein [Populus trichocarpa] gi|222833508|gb|EEE71985.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  175 bits (443), Expect = 1e-41
 Identities = 113/264 (42%), Positives = 157/264 (59%), Gaps = 20/264 (7%)
 Frame = +2

Query: 11  MGVVKRCLVLILFVWAHRAPIAWSLNDQHHRANKHHQMQCGFTRYPQQCVETLSGLGVGQ 190
           MG++   ++ +L      A ++W+     H      Q QC +TRYP  C+++L       
Sbjct: 1   MGLLVLVVLWLLGYTLGGASMSWAAT---HSFQMQVQTQCSYTRYPGLCLQSLKEFQ--D 55

Query: 191 SDADILIAMVEKLRNETMMLTPSNPHYQFQSLNNQHAHA-------SSMGNCFELMNMSL 349
              DI+ A+V K  +ET +     P+  F++L++ H  A       S    C  LM+MSL
Sbjct: 56  HPLDIMTALVNKTISETRL-----PNSYFETLSS-HLEAQEAERVLSVTDYCKNLMSMSL 109

Query: 350 RRLDQSLLALKSTSSRKRKQDIQTWLSAVVTFQSSCQDVVNGHS--DDLVGKISGKMDYL 523
           +RLDQSLLALK  S RK K DIQTWLSA +TFQ +C+D  +  S   DL+ +IS KMDYL
Sbjct: 110 KRLDQSLLALKD-SPRKNKHDIQTWLSAALTFQQACKDSTDSLSLSGDLMPRISEKMDYL 168

Query: 524 SYLASNTLALVNQMGRDQKSTMSNDE-----------FPRWMPAKNRKLLQTIPVEANAV 670
           S LASN+LALV+++  D  + + N             FP+W+ AK+RKLLQT  ++ANAV
Sbjct: 169 SQLASNSLALVSRITHDYGTKLKNSTKRRRAEEKSQGFPKWVSAKDRKLLQTSTIKANAV 228

Query: 671 VAKDGSGDYMSVSEAIQAASGARF 742
           VAKDG+G+Y ++SEAI AA G RF
Sbjct: 229 VAKDGTGNYKTISEAINAAPGKRF 252


>ref|XP_002516196.1| Pectinesterase-2 precursor, putative [Ricinus communis]
           gi|223544682|gb|EEF46198.1| Pectinesterase-2 precursor,
           putative [Ricinus communis]
          Length = 527

 Score =  164 bits (416), Expect = 1e-38
 Identities = 108/258 (41%), Positives = 148/258 (57%), Gaps = 21/258 (8%)
 Frame = +2

Query: 32  LVLILFVWAHRAPIAWSLNDQHHRANKHHQMQCGFTRYPQQCVETLSGLGVGQSDADILI 211
           ++  +  W   + +A S  D+    N   Q +C FTRYP  C++TL GL        I+ 
Sbjct: 1   MLRFMIFWLLGSALAASSMDE----NLQIQEECSFTRYPSLCLQTLRGLR--DDSVHIVS 54

Query: 212 AMVEKLRNETMMLTPSNPHYQFQSLNNQ------HAHASSMGNCFELMNMSLRRLDQSLL 373
           A+V K  +ET +     P   F SL +Q          S+   C  LM MSL+ LD+SLL
Sbjct: 55  ALVNKSISETKL-----PVSFFTSLTSQLGIQEAQYTQSTTDYCENLMKMSLKLLDKSLL 109

Query: 374 ALKSTSSRKRKQDIQTWLSAVVTFQSSCQDVVNG---HSDDLVGKISGKMDYLSYLASNT 544
           ALK  S  K K DIQTWLSA +T+Q +C+D V+     +  L  +IS KMDYLS L SN 
Sbjct: 110 ALKQ-SPEKNKNDIQTWLSAALTYQQACKDSVDSLGLPTGGLTSQISRKMDYLSELVSNP 168

Query: 545 LALVNQMGRDQKSTMSND------------EFPRWMPAKNRKLLQTIPVEANAVVAKDGS 688
           LALVN++  D  + +  +            +FP+W+ AK+RKLLQ+  ++ANAVVAKDG+
Sbjct: 169 LALVNRITGDHDNKLKKNSTRSRYLGEEIQDFPKWVSAKDRKLLQSSTIKANAVVAKDGT 228

Query: 689 GDYMSVSEAIQAASGARF 742
           G+Y +VSEAI+AA G RF
Sbjct: 229 GNYETVSEAIKAAGGGRF 246


>ref|NP_197586.1| Putative pectinesterase/pectinesterase inhibitor 54 [Arabidopsis
           thaliana] gi|122214307|sp|Q3E989.1|PME54_ARATH RecName:
           Full=Probable pectinesterase/pectinesterase inhibitor
           54; Includes: RecName: Full=Pectinesterase inhibitor 54;
           AltName: Full=Pectin methylesterase inhibitor 54;
           Includes: RecName: Full=Pectinesterase 54; Short=PE 54;
           AltName: Full=Pectin methylesterase 54; Short=AtPME54;
           Flags: Precursor gi|332005515|gb|AED92898.1| Putative
           pectinesterase/pectinesterase inhibitor 54 [Arabidopsis
           thaliana]
          Length = 512

 Score =  126 bits (316), Expect = 5e-27
 Identities = 95/255 (37%), Positives = 129/255 (50%), Gaps = 14/255 (5%)
 Frame = +2

Query: 11  MGVVKRCLVLILFVWAHRAPIAWSLNDQHHRANKHHQMQCGFTRYPQQCVETLSGLGVGQ 190
           MGV+   L  +L V A     A S N      N+  Q  C  T+Y   CV+ L     G 
Sbjct: 1   MGVIDMVLFWVLLVNALLIVDASSRNMPFAYQNEM-QRHCSSTKYTSLCVQNLREFRHGS 59

Query: 191 SDA-DILIAMVEKLRNETMMLTP-------SNPHYQFQSLNNQHAHASSMGNCFELMNMS 346
            D  D +  +V K  +++ +L P       S+     +         S   +C  LM MS
Sbjct: 60  LDGLDFVSFLVNKTISDSNLLIPPLSSSMGSSKLVSLEDSTYTLPSPSVSDSCERLMKMS 119

Query: 347 LRRLDQSLLALKSTSSRKR--KQDIQTWLSAVVTFQSSCQDVV----NGHSDDLVGKISG 508
            RRL Q++ AL   SSRKR  K D+QTWLSA +TFQ +C+D +       S   +  IS 
Sbjct: 120 TRRLRQAMEALNG-SSRKRHTKHDVQTWLSAAMTFQQACKDSILDSGGSSSASAISHISQ 178

Query: 509 KMDYLSYLASNTLALVNQMGRDQKSTMSNDEFPRWMPAKNRKLLQTIPVEANAVVAKDGS 688
           KMD+LS L SN+L LV+ + ++ K    +   PRW+ A  R+LL      A+ VVAKDGS
Sbjct: 179 KMDHLSRLVSNSLTLVDTIMKNPKPKTKSTALPRWVTAGERRLL-VGRARAHVVVAKDGS 237

Query: 689 GDYMSVSEAIQAASG 733
           GDY +V EA+ AA G
Sbjct: 238 GDYRTVMEAVTAAHG 252


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