BLASTX nr result

ID: Coptis25_contig00034500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034500
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...   196   7e-48
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...   190   3e-46
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   190   4e-46
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...   185   1e-44
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...   179   6e-43

>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  196 bits (497), Expect = 7e-48
 Identities = 104/264 (39%), Positives = 152/264 (57%), Gaps = 3/264 (1%)
 Frame = +1

Query: 7   VGCWNIRGLNKAFKQYEIKELIRKNELGIFGVVETKVKQKNIQRVLNGCCQGWSLEHNYE 186
           +GCWNIRGLN   K  E++ LI +  + +FG+VET+VK KN   V     + WS  +NY+
Sbjct: 3   IGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYD 62

Query: 187 YNEKGRIWVCWNPQSCTMSLITKDEQNITMDVK-LANGKEMVVTMVYGLNDRDKRRELWS 363
           ++ +GRIWVCWN  +  + +    +Q I + V  LA       +++YG N+   R  LWS
Sbjct: 63  FSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWS 122

Query: 364 AIIQLSCTIQK-PWIVLGDFNSVLSTQERVGGTETKPHHYQDLMQCVTMAGVVDLKYKGN 540
            I+  S   +  PWI++GDFN++ +  +++GG+ T       L  C+  A V DL Y G 
Sbjct: 123 DIVSRSDGWESTPWILMGDFNAIRNQSDKLGGSTTWAGTMHRLDTCIREAKVDDLWYSGM 182

Query: 541 FLTWSNK-QEARMWRKLDRVMVNAEWINDYGDTEATFNNPGATSDHSSMVVKSTTSKGQC 717
             TWSN+  E  + RKLDRV+VN +W  ++  +EA F  P   SDHS MVVK   +    
Sbjct: 183 HYTWSNQCPENLIMRKLDRVLVNEKWNLNFPLSEARF-LPSGMSDHSPMVVKVIGNDQNI 241

Query: 718 KKSFRFFNYWIDEEGFNEIVRGAW 789
           KK FRFF+ W+D + F  +V+  W
Sbjct: 242 KKPFRFFDMWMDHDEFMPLVKKVW 265


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score =  190 bits (483), Expect = 3e-46
 Identities = 102/264 (38%), Positives = 150/264 (56%), Gaps = 3/264 (1%)
 Frame = +1

Query: 7    VGCWNIRGLNKAFKQYEIKELIRKNELGIFGVVETKVKQKNIQRVLNGCCQGWSLEHNYE 186
            +GCWNIRGLN   K  E+  LI +  + +FG+VET+VK KN   V     + WS  +NY+
Sbjct: 457  IGCWNIRGLNDPIKHSELHRLIHQERITLFGLVETRVKDKNKDNVSQLLLRSWSFLYNYD 516

Query: 187  YNEKGRIWVCWNPQSCTMSLITKDEQNITMDVK-LANGKEMVVTMVYGLNDRDKRRELWS 363
            ++ +GRIWVCWN  +  + +    ++ I + V  LA       +++YG N+   R  LWS
Sbjct: 517  FSCRGRIWVCWNADTVKVDVFGMSDEAIHVSVTILATNISFNTSIIYGDNNASLREALWS 576

Query: 364  AIIQLSCTIQK-PWIVLGDFNSVLSTQERVGGTETKPHHYQDLMQCVTMAGVVDLKYKGN 540
             I+  S   +  PWI++GDFN++ +   R+GG+ T       L  C+  A V DL+Y G 
Sbjct: 577  DIVSRSDGWESTPWILMGDFNAIRNQSGRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGM 636

Query: 541  FLTWSNK-QEARMWRKLDRVMVNAEWINDYGDTEATFNNPGATSDHSSMVVKSTTSKGQC 717
              TWSN+  E  + R LDRV+VN +W  ++  ++A F  P   SDHS MVVK   +    
Sbjct: 637  HYTWSNQCPENLIMRTLDRVLVNEKWNLNFPLSKARF-LPSGMSDHSPMVVKVIGNDQNI 695

Query: 718  KKSFRFFNYWIDEEGFNEIVRGAW 789
            KK FRFF+ W+D + F  +V+  W
Sbjct: 696  KKPFRFFDMWMDHDEFMPLVKKVW 719


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  190 bits (482), Expect = 4e-46
 Identities = 103/261 (39%), Positives = 150/261 (57%), Gaps = 3/261 (1%)
 Frame = +1

Query: 7    VGCWNIRGLNKAFKQYEIKELIRKNELGIFGVVETKVKQKNIQRVLNGCCQGWSLEHNYE 186
            +GCWNIRGLN   K  E++ LI +  + +FG+VET+VK KN   V     + WS  +NY+
Sbjct: 808  IGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKYNVTQLLLRSWSFLYNYD 867

Query: 187  YNEKGRIWVCWNPQSCTMSLITKDEQNITMDVK-LANGKEMVVTMVYGLNDRDKRRELWS 363
            ++ +GRIWVCWN  +  + +    +Q I + V  LA       +++YG N+   R  LWS
Sbjct: 868  FSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWS 927

Query: 364  AIIQLSCTIQK-PWIVLGDFNSVLSTQERVGGTETKPHHYQDLMQCVTMAGVVDLKYKGN 540
             I+  S   +  PWI++GDFN++ +  +R+GG+ T       L   +  A V DL+Y G 
Sbjct: 928  DIVSRSDGWESTPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTVIREAKVDDLRYSGM 987

Query: 541  FLTWSNK-QEARMWRKLDRVMVNAEWINDYGDTEATFNNPGATSDHSSMVVKSTTSKGQC 717
              TWSN+  E  + RKLDRV+VN +W  ++  +EA F  P   SDHS MVVK   +    
Sbjct: 988  HYTWSNQCPENLIMRKLDRVLVNEKWNLNFPLSEARF-LPSGMSDHSPMVVKVIGNDQNI 1046

Query: 718  KKSFRFFNYWIDEEGFNEIVR 780
            KK FRFF+ W+D + F  + R
Sbjct: 1047 KKPFRFFDMWMDHDEFMPLGR 1067



 Score =  177 bits (448), Expect = 3e-42
 Identities = 98/255 (38%), Positives = 145/255 (56%), Gaps = 3/255 (1%)
 Frame = +1

Query: 25   RGLNKAFKQYEIKELIRKNELGIFGVVETKVKQKNIQRVLNGCCQGWSLEHNYEYNEKGR 204
            RGLN   K  E++ LI +  + +FG+VET+VK KN   V     + WS  +NY+++ +GR
Sbjct: 533  RGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVTQLLLRSWSFLYNYDFSCRGR 592

Query: 205  IWVCWNPQSCTMSLITKDEQNITMDVK-LANGKEMVVTMVYGLNDRDKRRELWSAIIQLS 381
            IWVCWN  +  + +    +Q I + V  LA       +++YG N+   R  LWS I+  S
Sbjct: 593  IWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRS 652

Query: 382  CTIQK-PWIVLGDFNSVLSTQERVGGTETKPHHYQDLMQCVTMAGVVDLKYKGNFLTWSN 558
               +  PWI++GDFN++ +  +R+GG+ T       L   +  A V DL+Y G   TWSN
Sbjct: 653  DGWESTPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTVIREAKVDDLRYSGMHYTWSN 712

Query: 559  K-QEARMWRKLDRVMVNAEWINDYGDTEATFNNPGATSDHSSMVVKSTTSKGQCKKSFRF 735
            +  E  + RKLDRV+VN +W  ++  +EA F  P   SDHS MVVK   +    KK FRF
Sbjct: 713  QCPENLIMRKLDRVLVNEKWNLNFPLSEARF-LPSGMSDHSPMVVKVIGNDQNIKKPFRF 771

Query: 736  FNYWIDEEGFNEIVR 780
            F+ W+D + F  +V+
Sbjct: 772  FDMWMDHDEFMPLVK 786


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
            predicted protein [Populus trichocarpa]
          Length = 809

 Score =  185 bits (469), Expect = 1e-44
 Identities = 101/258 (39%), Positives = 147/258 (56%), Gaps = 3/258 (1%)
 Frame = +1

Query: 25   RGLNKAFKQYEIKELIRKNELGIFGVVETKVKQKNIQRVLNGCCQGWSLEHNYEYNEKGR 204
            RGLN   K  E++ LI +  +G+FG+VET+VK KN   V     + WS  +NY+++ +GR
Sbjct: 533  RGLNDPIKHSELRRLIHQERIGLFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGR 592

Query: 205  IWVCWNPQSCTMSLITKDEQNITMDVK-LANGKEMVVTMVYGLNDRDKRRELWSAIIQLS 381
            IWVCWN  +  + +    +Q I + V  LA       +++YG N+   R  LWS I+  S
Sbjct: 593  IWVCWNADTVKVDVYGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRS 652

Query: 382  CTIQK-PWIVLGDFNSVLSTQERVGGTETKPHHYQDLMQCVTMAGVVDLKYKGNFLTWSN 558
               +  PWI++GDFN++ +  +R+GG+ T       L  C+  A V DL+Y G   TWSN
Sbjct: 653  DGWESTPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSN 712

Query: 559  K-QEARMWRKLDRVMVNAEWINDYGDTEATFNNPGATSDHSSMVVKSTTSKGQCKKSFRF 735
            +  E  + RKLDRV+VN +W   +  +EA F  P   SDHS MVVK   +    KK FRF
Sbjct: 713  QCPENLIMRKLDRVLVNEKWNLKFPLSEARF-LPSGMSDHSPMVVKVIGNDQNIKKPFRF 771

Query: 736  FNYWIDEEGFNEIVRGAW 789
            F+ W+D + F  +V+  W
Sbjct: 772  FDMWMDHDEFMPLVKKVW 789


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
            predicted protein [Populus trichocarpa]
          Length = 819

 Score =  179 bits (454), Expect = 6e-43
 Identities = 99/258 (38%), Positives = 145/258 (56%), Gaps = 3/258 (1%)
 Frame = +1

Query: 25   RGLNKAFKQYEIKELIRKNELGIFGVVETKVKQKNIQRVLNGCCQGWSLEHNYEYNEKGR 204
            RGLN   K  E++ LI +  + +FG+VET+VK KN   V     + WS  +NY+++ +GR
Sbjct: 386  RGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGR 445

Query: 205  IWVCWNPQSCTMSLITKDEQNITMDVK-LANGKEMVVTMVYGLNDRDKRRELWSAIIQLS 381
            IWVCWN  +  + +    +Q I + V  LA       +++YG N+   R  LWS I+  S
Sbjct: 446  IWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRS 505

Query: 382  CTIQKP-WIVLGDFNSVLSTQERVGGTETKPHHYQDLMQCVTMAGVVDLKYKGNFLTWSN 558
               +   WI++GDFN++ +  +R+GG+ T       L  C+  A V DL+Y G   TWSN
Sbjct: 506  DGWESTLWILIGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSN 565

Query: 559  K-QEARMWRKLDRVMVNAEWINDYGDTEATFNNPGATSDHSSMVVKSTTSKGQCKKSFRF 735
            +  E  + RKLDRV+VN +W   +  +EA F  P   SDHS MVVK   +    KK FRF
Sbjct: 566  QCPENLIMRKLDRVLVNEKWNLKFPLSEARF-LPSGMSDHSPMVVKVIGNDQNKKKPFRF 624

Query: 736  FNYWIDEEGFNEIVRGAW 789
            F+ W+D + F  +V+  W
Sbjct: 625  FDMWMDHDEFMPLVKKVW 642


Top