BLASTX nr result

ID: Coptis25_contig00034498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034498
         (1106 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274342.1| PREDICTED: uncharacterized protein LOC100267...   418   e-114
emb|CAN80963.1| hypothetical protein VITISV_005607 [Vitis vinifera]   418   e-114
ref|XP_002281519.2| PREDICTED: uncharacterized protein LOC100248...   405   e-111
emb|CAN66786.1| hypothetical protein VITISV_037767 [Vitis vinifera]   404   e-110
ref|XP_002534730.1| protein binding protein, putative [Ricinus c...   396   e-108

>ref|XP_002274342.1| PREDICTED: uncharacterized protein LOC100267121 [Vitis vinifera]
          Length = 635

 Score =  418 bits (1075), Expect = e-114
 Identities = 209/370 (56%), Positives = 271/370 (73%), Gaps = 2/370 (0%)
 Frame = +2

Query: 2    IACIRDLQRAMNYLLFEDSKSDKLVRAQILMQIAMKRMEKEFYHILSTNRDHLDPESISG 181
            I C+ DLQ+AM++++ E+S S+ +VRAQ LMQIAMKR++KEFY ILSTNR +LDPES+S 
Sbjct: 84   IKCVNDLQKAMHFMVSENSSSEMVVRAQRLMQIAMKRLQKEFYQILSTNRAYLDPESVST 143

Query: 182  RSSHAXXXXXXXXXXXXIVSDYDD--GSEDEIQVAGNSISEVEQVSAVAMADIKSIADCM 355
            RSS                SDYDD  G EDEI+ AG+SISEVEQVS+ AM D++SIA+CM
Sbjct: 144  RSSRLSARSS--------TSDYDDDVGPEDEIRTAGDSISEVEQVSSNAMDDLRSIAECM 195

Query: 356  ISSGYGKECVKVYKIIRKSIIDEGLYRLGIEQFSSYQIRKMDWAVLELKIKKWLNAANIA 535
            ISSGYGKECV++YKIIRKSI+DEG+YRLG+E+ SS QI KMDW ++ELKIK WL    I+
Sbjct: 196  ISSGYGKECVRIYKIIRKSIVDEGIYRLGVEKLSSSQIHKMDWEIVELKIKNWLEGIKIS 255

Query: 536  VKTLFYGERVLCDHVFSSSDSIRQSCFADISKEGAIILFGFPKKVSTRIKKLPDRVFRLF 715
            + TLF GER+LCDHVF++SDS+R+SCFA+ISKEGA +LF FP+ + ++ K+ PD  FR  
Sbjct: 256  ITTLFTGERILCDHVFAASDSMRESCFAEISKEGATLLFEFPRLLVSKSKRSPDMAFRTL 315

Query: 716  DLYNTLSNVWPXXXXXXXXXXXXXXXXRALASLTQLSDTIRSMVIEFESVINKDSSKSRI 895
            D+Y  +S+ WP                 AL +L++L +++R M+ EFESVI KDSSKS +
Sbjct: 316  DVYTAISDNWPDIESIFSFESTSSVRLHALTTLSKLGESVRMMLSEFESVIQKDSSKSPV 375

Query: 896  HGGSVHPLTRYVMNYLSILSDYNVILWDIFADWPLQIQSPLPESYFDGHGADDNPPSPLS 1075
             GG +HPLT+YVMNYLS L+DY+ IL DI  D P  +QSPLPE YF+    D+ P   +S
Sbjct: 376  AGGGLHPLTQYVMNYLSHLADYSSILGDIIGDSPPPVQSPLPEFYFESSDTDNTPAPAIS 435

Query: 1076 VRFAWLVLVL 1105
            VR AW++L L
Sbjct: 436  VRLAWIILFL 445


>emb|CAN80963.1| hypothetical protein VITISV_005607 [Vitis vinifera]
          Length = 591

 Score =  418 bits (1075), Expect = e-114
 Identities = 209/370 (56%), Positives = 271/370 (73%), Gaps = 2/370 (0%)
 Frame = +2

Query: 2    IACIRDLQRAMNYLLFEDSKSDKLVRAQILMQIAMKRMEKEFYHILSTNRDHLDPESISG 181
            I C+ DLQ+AM++++ E+S S+ +VRAQ LMQIAMKR++KEFY ILSTNR +LDPES+S 
Sbjct: 40   IKCVNDLQKAMHFMVSENSSSEMVVRAQRLMQIAMKRLQKEFYQILSTNRAYLDPESVST 99

Query: 182  RSSHAXXXXXXXXXXXXIVSDYDD--GSEDEIQVAGNSISEVEQVSAVAMADIKSIADCM 355
            RSS                SDYDD  G EDEI+ AG+SISEVEQVS+ AM D++SIA+CM
Sbjct: 100  RSSRLSARSS--------TSDYDDDVGPEDEIRTAGDSISEVEQVSSNAMDDLRSIAECM 151

Query: 356  ISSGYGKECVKVYKIIRKSIIDEGLYRLGIEQFSSYQIRKMDWAVLELKIKKWLNAANIA 535
            ISSGYGKECV++YKIIRKSI+DEG+YRLG+E+ SS QI KMDW ++ELKIK WL    I+
Sbjct: 152  ISSGYGKECVRIYKIIRKSIVDEGIYRLGVEKLSSSQIHKMDWEIVELKIKNWLEGIKIS 211

Query: 536  VKTLFYGERVLCDHVFSSSDSIRQSCFADISKEGAIILFGFPKKVSTRIKKLPDRVFRLF 715
            + TLF GER+LCDHVF++SDS+R+SCFA+ISKEGA +LF FP+ + ++ K+ PD  FR  
Sbjct: 212  ITTLFTGERILCDHVFAASDSMRESCFAEISKEGATLLFEFPRLLVSKSKRSPDMAFRTL 271

Query: 716  DLYNTLSNVWPXXXXXXXXXXXXXXXXRALASLTQLSDTIRSMVIEFESVINKDSSKSRI 895
            D+Y  +S+ WP                 AL +L++L +++R M+ EFESVI KDSSKS +
Sbjct: 272  DVYTAISDNWPDIESIFSFESTSSVRLHALTTLSKLGESVRMMLSEFESVIQKDSSKSPV 331

Query: 896  HGGSVHPLTRYVMNYLSILSDYNVILWDIFADWPLQIQSPLPESYFDGHGADDNPPSPLS 1075
             GG +HPLT+YVMNYLS L+DY+ IL DI  D P  +QSPLPE YF+    D+ P   +S
Sbjct: 332  AGGGLHPLTQYVMNYLSHLADYSSILGDIIGDSPPPVQSPLPEFYFESSDTDNTPAPAIS 391

Query: 1076 VRFAWLVLVL 1105
            VR AW++L L
Sbjct: 392  VRLAWIILFL 401


>ref|XP_002281519.2| PREDICTED: uncharacterized protein LOC100248374 [Vitis vinifera]
          Length = 621

 Score =  405 bits (1042), Expect = e-111
 Identities = 200/370 (54%), Positives = 275/370 (74%), Gaps = 2/370 (0%)
 Frame = +2

Query: 2    IACIRDLQRAMNYLLFEDSKSDKLVRAQILMQIAMKRMEKEFYHILSTNRDHLDPESISG 181
            ++ + DLQRAM++ +  DS S+KL+R+Q LMQ+AMKR+EKEFY ILS++R++LDPES+S 
Sbjct: 76   LSAVADLQRAMHFFVNHDSTSEKLIRSQNLMQLAMKRLEKEFYQILSSSREYLDPESVSS 135

Query: 182  RSSHAXXXXXXXXXXXXIVSDYDD--GSEDEIQVAGNSISEVEQVSAVAMADIKSIADCM 355
              S               +SD++D   SE+E   +  S+S VE+ S +AMAD+K+IADCM
Sbjct: 136  HVSARSS-----------ISDFEDDRASEEEFGASIESVSGVERESELAMADLKAIADCM 184

Query: 356  ISSGYGKECVKVYKIIRKSIIDEGLYRLGIEQFSSYQIRKMDWAVLELKIKKWLNAANIA 535
            ISSGYGKECVK+YK++RKSI+DE LY LG+E+ S  QI+KMDW ++E KI+ WLNA   A
Sbjct: 185  ISSGYGKECVKIYKLVRKSIVDESLYHLGVERLSYSQIQKMDWELIENKIRHWLNAVKAA 244

Query: 536  VKTLFYGERVLCDHVFSSSDSIRQSCFADISKEGAIILFGFPKKVSTRIKKLPDRVFRLF 715
            VKTLFYGER+LCD VFS+SDSIR+SCF++I+KEGA+ LFGFP+ V+ R KK P+++FR+ 
Sbjct: 245  VKTLFYGERILCDRVFSASDSIRESCFSEITKEGALSLFGFPEHVA-RCKKTPEKMFRIL 303

Query: 716  DLYNTLSNVWPXXXXXXXXXXXXXXXXRALASLTQLSDTIRSMVIEFESVINKDSSKSRI 895
            DLY ++S++WP                +A ++L +L + +R+M+ +FE+ I KDSSK+ I
Sbjct: 304  DLYESISDLWPEIDSIFSFESTSAVLSQATSALIRLGEAVRTMLSDFEAAIQKDSSKTPI 363

Query: 896  HGGSVHPLTRYVMNYLSILSDYNVILWDIFADWPLQIQSPLPESYFDGHGADDNPPSPLS 1075
             GG VHPLTRYVMNY+S LSDY+ +L  I A+WPL +QS +PESYF+   +DD+P S +S
Sbjct: 364  RGGGVHPLTRYVMNYVSFLSDYSGVLSVIVAEWPLTVQSSMPESYFENPKSDDDPTSAIS 423

Query: 1076 VRFAWLVLVL 1105
            +R AWLVLVL
Sbjct: 424  LRLAWLVLVL 433


>emb|CAN66786.1| hypothetical protein VITISV_037767 [Vitis vinifera]
          Length = 621

 Score =  404 bits (1038), Expect = e-110
 Identities = 199/370 (53%), Positives = 274/370 (74%), Gaps = 2/370 (0%)
 Frame = +2

Query: 2    IACIRDLQRAMNYLLFEDSKSDKLVRAQILMQIAMKRMEKEFYHILSTNRDHLDPESISG 181
            ++ + +LQRAM++ +  DS S+KL+R+Q LMQ+AMKR+EKEFY ILS++R++LDPES+S 
Sbjct: 76   LSAVABLQRAMHFFVNHDSTSEKLIRSQNLMQLAMKRLEKEFYQILSSSREYLDPESVSS 135

Query: 182  RSSHAXXXXXXXXXXXXIVSDYDD--GSEDEIQVAGNSISEVEQVSAVAMADIKSIADCM 355
              S               +SD++D   SE+E   +  S+S VE+ S  AMAD+K+IADCM
Sbjct: 136  HVSARSS-----------ISDFEDDRASEEEFGASIESVSGVERESEXAMADLKAIADCM 184

Query: 356  ISSGYGKECVKVYKIIRKSIIDEGLYRLGIEQFSSYQIRKMDWAVLELKIKKWLNAANIA 535
            ISSGYGKECVK+YK++RKSI+DE LY LG+E+ S  QI+KMDW ++E KI+ WLNA   A
Sbjct: 185  ISSGYGKECVKIYKLVRKSIVDESLYHLGVERLSYSQIQKMDWELIENKIRHWLNAVKAA 244

Query: 536  VKTLFYGERVLCDHVFSSSDSIRQSCFADISKEGAIILFGFPKKVSTRIKKLPDRVFRLF 715
            VKTLFYGER+LCD VFS+SDSIR+SCF++I+KEGA+ LFGFP+ V+ R KK P+++FR+ 
Sbjct: 245  VKTLFYGERILCDRVFSASDSIRESCFSEITKEGALSLFGFPEHVA-RCKKTPEKMFRIL 303

Query: 716  DLYNTLSNVWPXXXXXXXXXXXXXXXXRALASLTQLSDTIRSMVIEFESVINKDSSKSRI 895
            DLY ++S++WP                +A ++L +L + +R+M+ +FE+ I KDSSK+ I
Sbjct: 304  DLYESISDLWPEIDSIFSFESTSAVLSQATSALIRLGEAVRTMLSDFEAAIQKDSSKTPI 363

Query: 896  HGGSVHPLTRYVMNYLSILSDYNVILWDIFADWPLQIQSPLPESYFDGHGADDNPPSPLS 1075
             GG VHPLTRYVMNY+S LSDY+ +L  I A+WPL +QS +PESYF+   +DD+P S +S
Sbjct: 364  RGGGVHPLTRYVMNYVSFLSDYSGVLSVIVAEWPLTVQSSMPESYFENPKSDDDPTSAIS 423

Query: 1076 VRFAWLVLVL 1105
            +R AWLVLVL
Sbjct: 424  LRLAWLVLVL 433


>ref|XP_002534730.1| protein binding protein, putative [Ricinus communis]
            gi|223524670|gb|EEF27653.1| protein binding protein,
            putative [Ricinus communis]
          Length = 630

 Score =  396 bits (1017), Expect = e-108
 Identities = 198/366 (54%), Positives = 264/366 (72%), Gaps = 1/366 (0%)
 Frame = +2

Query: 11   IRDLQRAMNYLLFEDSKSDKLVRAQILMQIAMKRMEKEFYHILSTNRDHLDPESISGRSS 190
            IR+LQ AM Y + E+S S+KLVRAQ LMQIAMKR+EKEFY IL +NRD+LD ES+S  SS
Sbjct: 80   IRELQSAMQYYITENSASEKLVRAQNLMQIAMKRLEKEFYRILKSNRDYLDAESVSSHSS 139

Query: 191  HAXXXXXXXXXXXXIVSDYDDGSEDEI-QVAGNSISEVEQVSAVAMADIKSIADCMISSG 367
             A              S+ DD  +D   +  G SISEVE+VS +AMAD+K+IADCMI+SG
Sbjct: 140  RASNVSAVSED-----SENDDSEDDSSSRHGGGSISEVERVSLIAMADLKAIADCMIASG 194

Query: 368  YGKECVKVYKIIRKSIIDEGLYRLGIEQFSSYQIRKMDWAVLELKIKKWLNAANIAVKTL 547
            YGKECV++YK++RKSIIDE LY LG+E  +  Q++KMDW V+E+KIK WLNA   AVKTL
Sbjct: 195  YGKECVRIYKLVRKSIIDESLYHLGVESLNFSQVQKMDWEVVEIKIKTWLNAVKFAVKTL 254

Query: 548  FYGERVLCDHVFSSSDSIRQSCFADISKEGAIILFGFPKKVSTRIKKLPDRVFRLFDLYN 727
            FYGER+LCDHVFS+S SI +SCFA+I++EGA+ LF FP+ V+ + KK P+++F+  DLY 
Sbjct: 255  FYGERILCDHVFSASASITESCFAEITREGALALFAFPENVA-KCKKTPEKMFKTLDLYE 313

Query: 728  TLSNVWPXXXXXXXXXXXXXXXXRALASLTQLSDTIRSMVIEFESVINKDSSKSRIHGGS 907
             ++++W                 +A+ SL +L + +R+M+ +FE+ I+KD+SK+ + G  
Sbjct: 314  AIADLWQEIESIFNFESTSTVRTQAVTSLIKLGEGVRTMLSDFEAAISKDNSKTPVPGAG 373

Query: 908  VHPLTRYVMNYLSILSDYNVILWDIFADWPLQIQSPLPESYFDGHGADDNPPSPLSVRFA 1087
            VHPLTRYVMNY++ L+DY+ +L DI ADWPL  QSPLPESYF     +D   + +SVR A
Sbjct: 374  VHPLTRYVMNYIAFLADYSGVLSDIVADWPLTSQSPLPESYFGSPEHEDGAATAISVRLA 433

Query: 1088 WLVLVL 1105
            WL+LVL
Sbjct: 434  WLILVL 439


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