BLASTX nr result

ID: Coptis25_contig00034479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034479
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511072.1| Succinate/fumarate mitochondrial transporter...   188   4e-46
ref|XP_002321765.1| predicted protein [Populus trichocarpa] gi|2...   187   6e-46
dbj|BAJ53112.1| JHL07K02.2 [Jatropha curcas]                          186   2e-45
ref|XP_002277297.1| PREDICTED: calcium-binding mitochondrial car...   184   6e-45
ref|XP_004140204.1| PREDICTED: calcium-binding mitochondrial car...   181   7e-44

>ref|XP_002511072.1| Succinate/fumarate mitochondrial transporter, putative [Ricinus
           communis] gi|223550187|gb|EEF51674.1| Succinate/fumarate
           mitochondrial transporter, putative [Ricinus communis]
          Length = 510

 Score =  188 bits (477), Expect = 4e-46
 Identities = 90/110 (81%), Positives = 95/110 (86%)
 Frame = -1

Query: 332 CNPVKKQGPVTMEHVLLALXXXXXXXXXRIRSLFNFFDVENVGYLDYTQIEAGLSGLQIP 153
           CNPVKK GP+TM+HVLLAL         R+RSLFNFFD +N+GYLDY QIE GLS LQIP
Sbjct: 31  CNPVKKPGPITMDHVLLALRETKEERDLRLRSLFNFFDAKNIGYLDYAQIEVGLSALQIP 90

Query: 152 AEYKYAKDLLKVCDANRDGRVDYQEFRRYMDDKELELYRIFQAIDVEHNG 3
            EYKYAKDLLKVCDANRDGRVDYQEFRRYMDDKELELYRIFQAIDVEHNG
Sbjct: 91  GEYKYAKDLLKVCDANRDGRVDYQEFRRYMDDKELELYRIFQAIDVEHNG 140


>ref|XP_002321765.1| predicted protein [Populus trichocarpa] gi|222868761|gb|EEF05892.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  187 bits (476), Expect = 6e-46
 Identities = 91/110 (82%), Positives = 97/110 (88%)
 Frame = -1

Query: 332 CNPVKKQGPVTMEHVLLALXXXXXXXXXRIRSLFNFFDVENVGYLDYTQIEAGLSGLQIP 153
           CNPVKK GPV+++HVLLAL         RIRSLF+FFD  N+GYLDY QIEAGLSGLQIP
Sbjct: 15  CNPVKKPGPVSLDHVLLALRETKEERDVRIRSLFSFFDAANLGYLDYAQIEAGLSGLQIP 74

Query: 152 AEYKYAKDLLKVCDANRDGRVDYQEFRRYMDDKELELYRIFQAIDVEHNG 3
           AEYKYAKDLLKVCDANRDGRVDYQEFRRYMDDKE+ELYRIFQAIDVEHNG
Sbjct: 75  AEYKYAKDLLKVCDANRDGRVDYQEFRRYMDDKEMELYRIFQAIDVEHNG 124


>dbj|BAJ53112.1| JHL07K02.2 [Jatropha curcas]
          Length = 505

 Score =  186 bits (471), Expect = 2e-45
 Identities = 91/110 (82%), Positives = 95/110 (86%)
 Frame = -1

Query: 332 CNPVKKQGPVTMEHVLLALXXXXXXXXXRIRSLFNFFDVENVGYLDYTQIEAGLSGLQIP 153
           CNPVKK GP+TM+HVLLAL         RIRSLFNFFD  N GYLDY QIEAGLS LQIP
Sbjct: 27  CNPVKKPGPITMDHVLLALRETKEERDVRIRSLFNFFDAGNTGYLDYAQIEAGLSALQIP 86

Query: 152 AEYKYAKDLLKVCDANRDGRVDYQEFRRYMDDKELELYRIFQAIDVEHNG 3
           AEYKYAKDLLKVCDA+RDGRV+YQEFRRYMDDKELELYRIFQAIDVEHNG
Sbjct: 87  AEYKYAKDLLKVCDADRDGRVNYQEFRRYMDDKELELYRIFQAIDVEHNG 136


>ref|XP_002277297.1| PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1
           [Vitis vinifera] gi|296082251|emb|CBI21256.3| unnamed
           protein product [Vitis vinifera]
          Length = 489

 Score =  184 bits (467), Expect = 6e-45
 Identities = 91/111 (81%), Positives = 93/111 (83%)
 Frame = -1

Query: 335 GCNPVKKQGPVTMEHVLLALXXXXXXXXXRIRSLFNFFDVENVGYLDYTQIEAGLSGLQI 156
           GCNPV+K GPV+MEHVLLAL         RIRSLFNFFD  N GYLDY QIEAGLS L I
Sbjct: 8   GCNPVRKPGPVSMEHVLLALRETEEQREQRIRSLFNFFDAANAGYLDYAQIEAGLSALCI 67

Query: 155 PAEYKYAKDLLKVCDANRDGRVDYQEFRRYMDDKELELYRIFQAIDVEHNG 3
           PAEYKYA DLL VCDANRDGRVDYQEFRRYMDDKELELYRIFQAIDVEHNG
Sbjct: 68  PAEYKYANDLLNVCDANRDGRVDYQEFRRYMDDKELELYRIFQAIDVEHNG 118


>ref|XP_004140204.1| PREDICTED: calcium-binding mitochondrial carrier protein
           SCaMC-1-like [Cucumis sativus]
           gi|449528841|ref|XP_004171411.1| PREDICTED:
           calcium-binding mitochondrial carrier protein
           SCaMC-1-like [Cucumis sativus]
          Length = 496

 Score =  181 bits (458), Expect = 7e-44
 Identities = 88/110 (80%), Positives = 94/110 (85%)
 Frame = -1

Query: 332 CNPVKKQGPVTMEHVLLALXXXXXXXXXRIRSLFNFFDVENVGYLDYTQIEAGLSGLQIP 153
           CNPVK+ GP+++EHVLLAL         RIRSLFNFFD  N+G+LDY QIEAGL  LQIP
Sbjct: 19  CNPVKQLGPISLEHVLLALRESKEERDLRIRSLFNFFDAANLGHLDYAQIEAGLLALQIP 78

Query: 152 AEYKYAKDLLKVCDANRDGRVDYQEFRRYMDDKELELYRIFQAIDVEHNG 3
           AEYKYAKDLLKVCDANRDGRVDY EFRRYMDDKELELYRIFQAIDVEHNG
Sbjct: 79  AEYKYAKDLLKVCDANRDGRVDYNEFRRYMDDKELELYRIFQAIDVEHNG 128


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