BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034452
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...    84   9e-15
emb|CBI31119.3| unnamed protein product [Vitis vinifera]               84   9e-15
ref|XP_002511318.1| pentatricopeptide repeat-containing protein,...    84   2e-14

>ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 36/100 (36%), Positives = 59/100 (59%)
 Frame = -2

Query: 309 VVTWTALVSAYAKCGMPDEARCVFYKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRR 130
           +++W +++S Y KC + D A+ +F  MPE++ VSW++++SGY+Q    DE L+LF E + 
Sbjct: 442 LISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQM 501

Query: 129 ENVEPTEGMLIXXXXXXXXXXXXXXGKWVHDYVKCNGILL 10
              +P E  L+              GKWVH Y+K NG+ +
Sbjct: 502 SGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTI 541


>ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 36/100 (36%), Positives = 59/100 (59%)
 Frame = -2

Query: 309 VVTWTALVSAYAKCGMPDEARCVFYKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRR 130
           +++W +++S Y KC + D A+ +F  MPE++ VSW++++SGY+Q    DE L+LF E + 
Sbjct: 307 LISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQM 366

Query: 129 ENVEPTEGMLIXXXXXXXXXXXXXXGKWVHDYVKCNGILL 10
              +P E  L+              GKWVH Y+K NG+ +
Sbjct: 367 SGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTI 406


>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/100 (41%), Positives = 60/100 (60%)
 Frame = -2

Query: 309 VVTWTALVSAYAKCGMPDEARCVFYKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRR 130
           VVTWTA+++ YAK G    AR +F +MPE+NAVSW+A+++GY+Q G   EAL LFN+ + 
Sbjct: 179 VVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQI 238

Query: 129 ENVEPTEGMLIXXXXXXXXXXXXXXGKWVHDYVKCNGILL 10
               P  G ++              G+W+H YV  N ++L
Sbjct: 239 AGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVL 278


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/100 (41%), Positives = 60/100 (60%)
 Frame = -2

Query: 309 VVTWTALVSAYAKCGMPDEARCVFYKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRR 130
           VVTWTA+++ YAK G    AR +F +MPE+NAVSW+A+++GY+Q G   EAL LFN+ + 
Sbjct: 154 VVTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQI 213

Query: 129 ENVEPTEGMLIXXXXXXXXXXXXXXGKWVHDYVKCNGILL 10
               P  G ++              G+W+H YV  N ++L
Sbjct: 214 AGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVL 253


>ref|XP_002511318.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550433|gb|EEF51920.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/99 (42%), Positives = 60/99 (60%)
 Frame = -2

Query: 297 TALVSAYAKCGMPDEARCVFYKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRRENVE 118
           TALV  YAKCG  D+AR +F +M  R+ V+W+A++SGYSQ  R  EA+ LFNE +  N++
Sbjct: 266 TALVDMYAKCGEVDKARRLFDQMDGRDVVAWSAMISGYSQARRCQEAVDLFNEMQMANLD 325

Query: 117 PTEGMLIXXXXXXXXXXXXXXGKWVHDYVKCNGILLTAS 1
           P E  ++              GKW+H Y+K  G+ LT +
Sbjct: 326 PNEVTMVSVLSCCAALGALGTGKWIHLYIKRKGMNLTVT 364



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/71 (40%), Positives = 38/71 (53%)
 Frame = -2

Query: 309 VVTWTALVSAYAKCGMPDEARCVFYKMPERNAVSWAAVVSGYSQCGRHDEALSLFNETRR 130
           V   TALV  Y KCG+ D A  VF  MP +N  SW A++ G +  G+   AL  +   R 
Sbjct: 363 VTLGTALVDFYGKCGLVDSAIEVFQLMPVKNVYSWTALIQGLANNGQGKRALEYYQLMRE 422

Query: 129 ENVEPTEGMLI 97
            NVEP +  L+
Sbjct: 423 SNVEPNDVWLM 433