BLASTX nr result
ID: Coptis25_contig00034440
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00034440
(330 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274466.1| PREDICTED: probable leucine-rich repeat rece... 59 6e-18
emb|CBI36563.3| unnamed protein product [Vitis vinifera] 59 6e-18
emb|CAN77573.1| hypothetical protein VITISV_010410 [Vitis vinifera] 57 3e-17
ref|XP_002510965.1| receptor protein kinase, putative [Ricinus c... 61 2e-16
ref|XP_002325645.1| predicted protein [Populus trichocarpa] gi|2... 55 3e-16
>ref|XP_002274466.1| PREDICTED: probable leucine-rich repeat receptor-like protein
kinase At1g35710-like [Vitis vinifera]
Length = 1319
Score = 59.3 bits (142), Expect(2) = 6e-18
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +1
Query: 178 LSENQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLS 327
LS N LVG IPKEL+NL+ LFNL+L N+LSG VP E +LS+L F D++
Sbjct: 760 LSSNHLVGGIPKELANLTSLFNLSLRDNKLSGQVPSEIGKLSDLAFFDVA 809
Score = 56.2 bits (134), Expect(2) = 6e-18
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +2
Query: 2 FGLHTSLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRISGGLGQLNDLQVL 175
FG++ +LNYIDL YN+L G+L W LT++ + N ISG I LG+ LQ+L
Sbjct: 701 FGIYPNLNYIDLSYNKLYGELSKRWGRCHSLTSMKISHNNISGTIPAELGEATQLQLL 758
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +1
Query: 181 SENQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLS 327
S+N L+G IP NL L L L N LSG++P E L +L LD S
Sbjct: 497 SDNNLIGSIPSSFGNLIYLTTLYLSDNCLSGSIPQEVGLLRSLNELDFS 545
Score = 39.3 bits (90), Expect(2) = 2e-07
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +2
Query: 5 GLHTSLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRISGGLGQLNDLQVLIFL 184
GL SLN ++L N L G +PS+ +L L + N +SG I G+G L + L F
Sbjct: 438 GLLISLNDLELSNNHLFGSIPSSIVKLGNLMTLYLNDNNLSGPIPQGIGLLKSVNDLDFS 497
Query: 185 RTN 193
N
Sbjct: 498 DNN 500
Score = 44.7 bits (104), Expect(2) = 2e-06
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +1
Query: 178 LSENQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLS 327
LS+N L+G IP + NLS L NL L N+LSG +P E L +L L+LS
Sbjct: 400 LSDNILIGSIPPSIGNLSQLTNLYLYDNKLSGFIPQEVGLLISLNDLELS 449
Score = 32.0 bits (71), Expect(2) = 2e-06
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 5 GLHTSLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRIS---GGLGQLNDLQV 172
G SL+ +D N L+G +PS+ +LT L + N +SG I G L LN++Q+
Sbjct: 342 GFLRSLHELDFSGNDLNGSIPSSIGNLVNLTILHLFDNHLSGSIPQEIGFLTSLNEMQL 400
Score = 40.4 bits (93), Expect(2) = 2e-06
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 178 LSENQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLS 327
L +N L G IP+E L L +L L N L+G++PP L NL +L L+
Sbjct: 568 LFDNHLSGPIPQEFGLLRSLSDLELSNNSLTGSIPPSIGNLRNLSYLYLA 617
Score = 35.8 bits (81), Expect(2) = 2e-06
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +2
Query: 5 GLHTSLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRISGGLGQLNDLQVLIFL 184
GL S+N +D N L G +PS++ LT L + N +SG I +G L L L F
Sbjct: 486 GLLKSVNDLDFSDNNLIGSIPSSFGNLIYLTTLYLSDNCLSGSIPQEVGLLRSLNELDFS 545
Query: 185 RTN 193
N
Sbjct: 546 GNN 548
Score = 40.0 bits (92), Expect(2) = 5e-06
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +1
Query: 187 NQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLS 327
N L G IP++L S LF L L N ++PPE + L+ LDLS
Sbjct: 811 NNLSGSIPEQLGECSKLFYLNLSNNNFGESIPPEIGNIHRLQNLDLS 857
Score = 35.0 bits (79), Expect(2) = 5e-06
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 5 GLHTSLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRISGGLGQLNDL 166
G T L +DL N L G +P L L + N++SG++ +G+L+DL
Sbjct: 750 GEATQLQLLDLSSNHLVGGIPKELANLTSLFNLSLRDNKLSGQVPSEIGKLSDL 803
>emb|CBI36563.3| unnamed protein product [Vitis vinifera]
Length = 901
Score = 59.3 bits (142), Expect(2) = 6e-18
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +1
Query: 178 LSENQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLS 327
LS N LVG IPKEL+NL+ LFNL+L N+LSG VP E +LS+L F D++
Sbjct: 342 LSSNHLVGGIPKELANLTSLFNLSLRDNKLSGQVPSEIGKLSDLAFFDVA 391
Score = 56.2 bits (134), Expect(2) = 6e-18
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +2
Query: 2 FGLHTSLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRISGGLGQLNDLQVL 175
FG++ +LNYIDL YN+L G+L W LT++ + N ISG I LG+ LQ+L
Sbjct: 283 FGIYPNLNYIDLSYNKLYGELSKRWGRCHSLTSMKISHNNISGTIPAELGEATQLQLL 340
Score = 40.0 bits (92), Expect(2) = 5e-06
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +1
Query: 187 NQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLS 327
N L G IP++L S LF L L N ++PPE + L+ LDLS
Sbjct: 393 NNLSGSIPEQLGECSKLFYLNLSNNNFGESIPPEIGNIHRLQNLDLS 439
Score = 35.0 bits (79), Expect(2) = 5e-06
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 5 GLHTSLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRISGGLGQLNDL 166
G T L +DL N L G +P L L + N++SG++ +G+L+DL
Sbjct: 332 GEATQLQLLDLSSNHLVGGIPKELANLTSLFNLSLRDNKLSGQVPSEIGKLSDL 385
>emb|CAN77573.1| hypothetical protein VITISV_010410 [Vitis vinifera]
Length = 1216
Score = 57.4 bits (137), Expect(2) = 3e-17
Identities = 29/50 (58%), Positives = 37/50 (74%)
Frame = +1
Query: 178 LSENQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLS 327
LS N LVG IPKEL+NL+ LFNL+L N+LSG VP E +LS+L F ++
Sbjct: 815 LSSNHLVGGIPKELANLTSLFNLSLSDNKLSGQVPSEIGKLSDLAFFXVA 864
Score = 55.8 bits (133), Expect(2) = 3e-17
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +2
Query: 2 FGLHTSLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRISGGLGQLNDLQVL 175
FG++ +LNYIDL YN+L G+L W LT++ + N ISG I LG+ LQ+L
Sbjct: 756 FGIYPNLNYIDLSYNKLYGELSKRWGRCHSLTSMKISHNNISGXIPAELGEAXQLQLL 813
Score = 47.4 bits (111), Expect(2) = 4e-07
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = +1
Query: 163 LTGTYLSENQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDL 324
LT YL +N+L G IP E+ LS L +L LCCN L G +P LS L L L
Sbjct: 426 LTNLYLYDNKLSGFIPDEIGLLSSLSDLELCCNTLIGAIPSSIGNLSQLTTLYL 479
Score = 31.2 bits (69), Expect(2) = 4e-07
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +2
Query: 17 SLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRIS---GGLGQLNDLQV 172
SL+ +D N L+G +PS+ +LT L + N +SG I G L LN++Q+
Sbjct: 353 SLHELDFSGNDLNGSIPSSIGNLVNLTILHLFDNHLSGSIPXEIGFLTSLNEMQL 407
Score = 39.3 bits (90), Expect(2) = 2e-06
Identities = 22/49 (44%), Positives = 26/49 (53%)
Frame = +1
Query: 181 SENQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLS 327
S N L+G IP NL L L L N LSG++P E L +L LD S
Sbjct: 552 SXNNLIGSIPSSFGNLIYLTTLYLSDNCLSGSIPQEVGLLRSLNELDFS 600
Score = 37.0 bits (84), Expect(2) = 2e-06
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +2
Query: 5 GLHTSLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRISGGLGQLNDLQVLIFL 184
GL SLN ++L N L G +PS+ +L L + N +SG G+G L L F
Sbjct: 493 GLLISLNDLELSNNHLFGSIPSSIVKLGNLMTLYLNDNNLSGPXPQGIGLLKSXNDLDFS 552
Query: 185 RTN 193
N
Sbjct: 553 XNN 555
Score = 39.7 bits (91), Expect(2) = 3e-06
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 178 LSENQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLS 327
L +N L G IP+E+ L L +L L N +G++PP L NL +L L+
Sbjct: 623 LFDNHLFGPIPQEVGLLRSLSDLELSNNSFTGSIPPSIGNLRNLSYLYLA 672
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +2
Query: 5 GLHTSLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRISGGLGQLNDLQVLIFL 184
GL S N +D N L G +PS++ LT L + N +SG I +G L L L F
Sbjct: 541 GLLKSXNDLDFSXNNLIGSIPSSFGNLIYLTTLYLSDNCLSGSIPQEVGLLRSLNELDFS 600
Query: 185 RTN 193
N
Sbjct: 601 SNN 603
>ref|XP_002510965.1| receptor protein kinase, putative [Ricinus communis]
gi|223550080|gb|EEF51567.1| receptor protein kinase,
putative [Ricinus communis]
Length = 949
Score = 60.8 bits (146), Expect(2) = 2e-16
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +2
Query: 2 FGLHTSLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRISGGLGQLNDLQVL 175
FG++ +L YIDL +N+L G+LPS W ++LT L + GN I G+I+ + QLN L VL
Sbjct: 347 FGVYPNLTYIDLSFNKLRGELPSKWGECRNLTLLRIAGNMIGGKIAVQISQLNQLVVL 404
Score = 49.7 bits (117), Expect(2) = 2e-16
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +1
Query: 178 LSENQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLS 327
LS NQ+ GE+P +L LS L L+L N+LSG VP E LS+L+ LDLS
Sbjct: 406 LSSNQISGEMPAQLGKLSKLLFLSLKGNRLSGQVPVEIGELSDLQSLDLS 455
>ref|XP_002325645.1| predicted protein [Populus trichocarpa] gi|222862520|gb|EEF00027.1|
predicted protein [Populus trichocarpa]
Length = 1163
Score = 55.1 bits (131), Expect(2) = 3e-16
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +1
Query: 178 LSENQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLS 327
LS N L G IPKEL L +L+NLTL N LSG +P + + LS+L+ LDL+
Sbjct: 592 LSSNHLEGTIPKELGGLKLLYNLTLSNNHLSGAIPSDIKMLSSLKILDLA 641
Score = 54.7 bits (130), Expect(2) = 3e-16
Identities = 22/58 (37%), Positives = 36/58 (62%)
Frame = +2
Query: 2 FGLHTSLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRISGGLGQLNDLQVL 175
FG++ LNY+DL YN G+L W ++++T+L + N +SG I LG+ LQ++
Sbjct: 533 FGIYPHLNYVDLSYNNFYGELSLKWGDYRNITSLKISNNNVSGEIPAELGKATQLQLI 590
Score = 48.1 bits (113), Expect(2) = 1e-06
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +1
Query: 163 LTGTYLSENQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLSF 330
L+ YL EN L G +P E+ L L LT N+L G++P + L++L+FLDLS+
Sbjct: 419 LSFLYLGENNLYGYVPSEIGKLKSLEKLTFGENKLRGSLPLKMNNLTHLKFLDLSY 474
Score = 29.3 bits (64), Expect(2) = 1e-06
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 29 IDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRISGGLGQLNDLQVLIF 181
++LG N L G +P++ + L+ + N++SG I +G L L L F
Sbjct: 347 VELGQNNLIGSIPTSVGNLRKLSIFYLWRNKLSGFIPQEIGLLESLNDLDF 397
Score = 38.9 bits (89), Expect(2) = 4e-06
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 178 LSENQLVGEIPKELSNLSVLFNLTLCCNQLSGNVPPEFERLSNLEFLDLS 327
L+ N L G IPK+L S L L L N+ + ++P E L +L+ LDLS
Sbjct: 640 LASNNLSGSIPKQLGECSNLLLLNLSNNKFTNSIPQEMGFLRSLQDLDLS 689
Score = 36.6 bits (83), Expect(2) = 4e-06
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 5 GLHTSLNYIDLGYNRLSGKLPSNWTAFKDLTALLVPGNEISGRISGGLGQLNDLQVLIFL 184
G T L IDL N L G +P K L L + N +SG I + L+ L++L
Sbjct: 582 GKATQLQLIDLSSNHLEGTIPKELGGLKLLYNLTLSNNHLSGAIPSDIKMLSSLKILDLA 641
Query: 185 RTN 193
N
Sbjct: 642 SNN 644