BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034438
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633022.1| PREDICTED: dof zinc finger protein DOF1.4-li...   222   1e-55
emb|CBI30590.3| unnamed protein product [Vitis vinifera]              218   2e-54
ref|XP_002509452.1| zinc finger protein, putative [Ricinus commu...   204   4e-50
ref|XP_002329827.1| f-box family protein [Populus trichocarpa] g...   200   5e-49
gb|ACU65940.1| putative DOF zinc finger protein [Jatropha curcas]     192   1e-46

>ref|XP_003633022.1| PREDICTED: dof zinc finger protein DOF1.4-like [Vitis vinifera]
          Length = 309

 Score =  222 bits (565), Expect = 1e-55
 Identities = 127/271 (46%), Positives = 171/271 (63%), Gaps = 15/271 (5%)
 Frame = +2

Query: 215 SSSGRTMGMKQPQDQQVLKCPRCDSSNTKFCYYNNYNLSQPRHFCKACKRYWTRGGTLRN 394
           +S+GR M  K  Q+QQ LKCPRCDSSNTKFCYYNNY+LSQPRHFCKACKRYWTRGGTLRN
Sbjct: 2   ASTGRVME-KPGQEQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRN 60

Query: 395 VPIGGGCRKNKRIKRYSAS----DLXXXXXXXXXXXXQNGFISAGNDVNPVFYGLQLNNQ 562
           VP+GGGCRKNKR+KR ++S                  Q    ++ N V P+FYGL  +N 
Sbjct: 61  VPVGGGCRKNKRVKRPASSVDAPSSAPTAALNPPPPSQIDLSASSNHVTPLFYGLP-SNP 119

Query: 563 SEINFTFPKFNSRVLNQITSCTGFDTESQLLSAYGTGFPSMGMTSIGEHGEH------ST 724
           SE+N  FP+FNSR  N+ T  +G+D + Q L A G GF S  + +     ++      + 
Sbjct: 120 SELNLPFPRFNSRASNEDT-VSGYDLQPQ-LGALGLGFSSGIIANDTRTDDYRNGFNPAK 177

Query: 725 QTHDVVTSAPSIPNYPVFGSSANT-----ASMITSSIHQQKSFISSGLKDTRPSNNFQAV 889
           Q  D+VTS+  + NY +FGSS++T     AS+I SS+ QQK F++  LK++R +N+FQ +
Sbjct: 178 QIQDLVTSSSLLSNYSIFGSSSSTTTPTMASLINSSLQQQK-FMNGDLKESRGANHFQPL 236

Query: 890 FPFNDLLLGSLGTDRTTFTKAEKMEEGNGVM 982
            P+ DL    +  + +   K  K E G+  +
Sbjct: 237 VPYEDL---QISGNTSMAMKEVKSEHGHNTL 264


>emb|CBI30590.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  218 bits (554), Expect = 2e-54
 Identities = 124/252 (49%), Positives = 166/252 (65%), Gaps = 15/252 (5%)
 Frame = +2

Query: 182 EQKKDEDGVMTSSSGRTMGMKQPQDQQVLKCPRCDSSNTKFCYYNNYNLSQPRHFCKACK 361
           E + D+ G+M +S+GR M  K  Q+QQ LKCPRCDSSNTKFCYYNNY+LSQPRHFCKACK
Sbjct: 84  ENQIDDKGLM-ASTGRVME-KPGQEQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACK 141

Query: 362 RYWTRGGTLRNVPIGGGCRKNKRIKRYSAS----DLXXXXXXXXXXXXQNGFISAGNDVN 529
           RYWTRGGTLRNVP+GGGCRKNKR+KR ++S                  Q    ++ N V 
Sbjct: 142 RYWTRGGTLRNVPVGGGCRKNKRVKRPASSVDAPSSAPTAALNPPPPSQIDLSASSNHVT 201

Query: 530 PVFYGLQLNNQSEINFTFPKFNSRVLNQITSCTGFDTESQLLSAYGTGFPSMGMTSIGEH 709
           P+FYGL  +N SE+N  FP+FNSR  N+ T  +G+D + Q L A G GF S  + +    
Sbjct: 202 PLFYGLP-SNPSELNLPFPRFNSRASNEDT-VSGYDLQPQ-LGALGLGFSSGIIANDTRT 258

Query: 710 GEH------STQTHDVVTSAPSIPNYPVFGSSANT-----ASMITSSIHQQKSFISSGLK 856
            ++      + Q  D+VTS+  + NY +FGSS++T     AS+I SS+ QQK F++  LK
Sbjct: 259 DDYRNGFNPAKQIQDLVTSSSLLSNYSIFGSSSSTTTPTMASLINSSLQQQK-FMNGDLK 317

Query: 857 DTRPSNNFQAVF 892
           ++R +N+FQ ++
Sbjct: 318 ESRGANHFQPLW 329


>ref|XP_002509452.1| zinc finger protein, putative [Ricinus communis]
            gi|223549351|gb|EEF50839.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 357

 Score =  204 bits (518), Expect = 4e-50
 Identities = 128/302 (42%), Positives = 166/302 (54%), Gaps = 30/302 (9%)
 Frame = +2

Query: 194  DEDGVMTSSSGRTMGMK---------QPQDQQVLKCPRCDSSNTKFCYYNNYNLSQPRHF 346
            DE  +M SS+ + M  +         Q Q QQ LKCPRCDSSNTKFCYYNNY+LSQPRHF
Sbjct: 24   DEKSLMVSSTSKLMEKRGQDPSQPQQQQQPQQALKCPRCDSSNTKFCYYNNYSLSQPRHF 83

Query: 347  CKACKRYWTRGGTLRNVPIGGGCRKNKRIKRYSASDLXXXXXXXXXXXXQN--------- 499
            CKACKRYWTRGGTLRNVP+GGGCRKNKR+KR S+S               N         
Sbjct: 84   CKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPSSSGGEGTINQVSSVNPNNPSSHQTPID 143

Query: 500  GFISAGNDVNPVFYGLQLNNQSEINFTFPKFNSRVLNQITSCTGFDTESQLLSAYGTGFP 679
               S  N +N +FYGL   N SE+N  F +FNSRV + +   TG+D   Q L+A   GF 
Sbjct: 144  HITSTSNHINHLFYGLP-TNPSEMNLPFGRFNSRVSSNMD--TGYDLPPQ-LNALALGFS 199

Query: 680  S--MGMTSIGEHGEHSTQTHDVVTSAPSIPNY-PVFGSSANT--------ASMITSSIHQ 826
            S  +G          +    D VTS   + NY  +FG S+++        A+++ SS+HQ
Sbjct: 200  SGILGNNEANNGFNPTKHIQDSVTSTSLLTNYSSIFGCSSSSTATTSPSIATLLASSLHQ 259

Query: 827  QKSFISSGLKDT-RPSNNFQAVFPFNDLLLGSLGTDRTTFTKAEKMEEGNGVMSNKVDFN 1003
            Q  F    +KD+ R  N+FQ + PF DL +    T+     K  K E+G     +++ +N
Sbjct: 260  QNKF---SVKDSNRAPNHFQNLTPFEDLQMSCNSTESGIAMKEVKTEQG----QSRLHWN 312

Query: 1004 AP 1009
             P
Sbjct: 313  MP 314


>ref|XP_002329827.1| f-box family protein [Populus trichocarpa]
            gi|222870889|gb|EEF08020.1| f-box family protein [Populus
            trichocarpa]
          Length = 322

 Score =  200 bits (508), Expect = 5e-49
 Identities = 126/273 (46%), Positives = 166/273 (60%), Gaps = 17/273 (6%)
 Frame = +2

Query: 242  KQPQDQQVLKCPRCDSSNTKFCYYNNYNLSQPRHFCKACKRYWTRGGTLRNVPIGGGCRK 421
            +Q Q QQ LKCPRCDSSNTKFCYYNNY+LSQPRHFCKACKRYWTRGGTLRNVP+GGGCRK
Sbjct: 21   QQQQLQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRK 80

Query: 422  NKRIKR-YSASDLXXXXXXXXXXXXQ---NGFISAGNDVNPVFYGLQLNNQSEINFTFP- 586
            NKR+KR  SA++             Q   +   S  N +NP+FYGL  +N SE+N  FP 
Sbjct: 81   NKRVKRPASAAEGASNSVSSANPNPQTPIDHISSTSNHINPLFYGLSGSNPSEMNLPFPG 140

Query: 587  KFNSRVLNQITSCTGFDTESQLLSAYGTGFPSMGMTSIGEHGEHST-QTHDVVTSAPSIP 763
            +FN R+ + +   +G+      L+A   GF S  MT+   +G + T Q  DVVTS   + 
Sbjct: 141  RFNPRMDSAV---SGYHDLQPQLNALALGFSSGIMTTNDANGFNPTKQIQDVVTSNSLLS 197

Query: 764  NYP-VFGSSANT--------ASMITSSIHQQKSFISSGLKD-TRPSNNFQAV-FPFNDLL 910
            +Y  +FGSS  +        AS++ SS +QQK F +SG+K+ TR  N FQ++  PF +L 
Sbjct: 198  SYSNLFGSSTTSTNTTSPTIASLLASSFNQQK-FTNSGIKESTRAPNYFQSLTVPFKELQ 256

Query: 911  LGSLGTDRTTFTKAEKMEEGNGVMSNKVDFNAP 1009
            +    ++     K  K E       N++D+N P
Sbjct: 257  MNG-NSESGIGMKGVKTEHN----QNRLDWNVP 284


>gb|ACU65940.1| putative DOF zinc finger protein [Jatropha curcas]
          Length = 341

 Score =  192 bits (488), Expect = 1e-46
 Identities = 123/271 (45%), Positives = 161/271 (59%), Gaps = 20/271 (7%)
 Frame = +2

Query: 257  QQVLKCPRCDSSNTKFCYYNNYNLSQPRHFCKACKRYWTRGGTLRNVPIGGGCRKNKRIK 436
            QQ LKCPRCDSSNTKFCYYNNY+LSQPRHFCKACKRYWTRGGTLRNVP+GGGCRKNKR+K
Sbjct: 43   QQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 102

Query: 437  RYSASDLXXXXXXXXXXXXQN-------GFISAGNDVNPVFYGLQLNNQSEINFTFP-KF 592
            R +++               N          S  N  NP+FYGL   N SE+N +FP  F
Sbjct: 103  RPASAVEGATTSASSAANPNNHPSQTPIDISSTSNHSNPLFYGLTA-NPSEVNLSFPGTF 161

Query: 593  NSRVLNQITSCTGFDTESQLLSAYGTGFPSMGMTSIGEHGEHSTQTHDVVTSAPS-IPNY 769
            NSRV + +   +G+D + Q L+A   GF     T+ G     S Q  DVVTS+ S + NY
Sbjct: 162  NSRVSSNMDIVSGYDLQPQ-LNALALGF----STNNGGFNP-SKQIQDVVTSSTSLLSNY 215

Query: 770  P-VFGS--------SANTASMITSSIHQQKSFISSGLKDTRPS-NNFQAVFPFNDL-LLG 916
              +FGS        S   A+++ SS+HQQK      +KD R + N++Q++  F DL + G
Sbjct: 216  SNLFGSSNSLTATASPTMATLLASSLHQQK----FSIKDARAALNHYQSLTSFQDLQMSG 271

Query: 917  SLGTDRTTFTKAEKMEEGNGVMSNKVDFNAP 1009
            +        TK  K+E+ +    +++D+N P
Sbjct: 272  NNNESAGIATKEVKIEQDH----SRLDWNMP 298