BLASTX nr result

ID: Coptis25_contig00034431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034431
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320260.1| outward rectifying potassium channel [Populu...   151   5e-35
ref|XP_002515189.1| Calcium-activated outward-rectifying potassi...   150   8e-35
ref|XP_002274039.1| PREDICTED: probable calcium-activated outwar...   148   4e-34
emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]   148   4e-34
ref|XP_003554573.1| PREDICTED: probable calcium-activated outwar...   147   7e-34

>ref|XP_002320260.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222861033|gb|EEE98575.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 318

 Score =  151 bits (382), Expect = 5e-35
 Identities = 73/121 (60%), Positives = 90/121 (74%), Gaps = 3/121 (2%)
 Frame = +3

Query: 153 SFSLIKQSMFXXXXXXXXXXXXXXXNREQYSGVETHPVVDAFYFCIITMCTIGYGDITPL 332
           S S+I+Q+ F               N + +SG+ETHPVVDA YFCI+TMCTIGYGDITPL
Sbjct: 30  STSIIRQATFLLSMYLLLGVIIYSFNTDHFSGIETHPVVDALYFCIVTMCTIGYGDITPL 89

Query: 333 TPTTKLFSCVFVLVGFGLIHVLLTGALSYVLDLQENMILTSIQVG---DHSGFSAKKYIF 503
           TP TK+F+CVFVLVGFG I +LL+G ++YVLDLQE+MILT I++G   +H GFSA  YIF
Sbjct: 90  TPVTKVFACVFVLVGFGFIDILLSGLVNYVLDLQESMILTGIEMGKNRNHEGFSATDYIF 149

Query: 504 D 506
           D
Sbjct: 150 D 150


>ref|XP_002515189.1| Calcium-activated outward-rectifying potassium channel, putative
           [Ricinus communis] gi|223545669|gb|EEF47173.1|
           Calcium-activated outward-rectifying potassium channel,
           putative [Ricinus communis]
          Length = 390

 Score =  150 bits (380), Expect = 8e-35
 Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 4/122 (3%)
 Frame = +3

Query: 153 SFSLIKQSMFXXXXXXXXXXXXXXXNREQYSGVETHPVVDAFYFCIITMCTIGYGDITPL 332
           S S+I+Q++F               NR+ +SG+ETHPVVDA YFCI+TMCTIGYGDI PL
Sbjct: 97  SSSIIRQAIFLLFLYLLLGVVIYSFNRDNFSGIETHPVVDALYFCIVTMCTIGYGDIAPL 156

Query: 333 TPTTKLFSCVFVLVGFGLIHVLLTGALSYVLDLQENMILTSIQVGD----HSGFSAKKYI 500
           TP TK+F+CVFVLVGFG I +LL+G ++YVLDLQE+MIL  IQ+G+    H GFSA+ YI
Sbjct: 157 TPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQESMILAGIQMGNNRTAHEGFSARNYI 216

Query: 501 FD 506
            D
Sbjct: 217 VD 218


>ref|XP_002274039.1| PREDICTED: probable calcium-activated outward-rectifying potassium
           channel 5, chloroplastic [Vitis vinifera]
          Length = 390

 Score =  148 bits (374), Expect = 4e-34
 Identities = 73/120 (60%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
 Frame = +3

Query: 153 SFSLIKQSMFXXXXXXXXXXXXXXXNREQYSGVETHPVVDAFYFCIITMCTIGYGDITPL 332
           S S+I+Q+ F               NR+ +SG+ETH VVDA YFCI+TMCTIGYGDI PL
Sbjct: 99  STSIIRQAFFLLFLYLSLGVVIYSFNRDNFSGIETHAVVDALYFCIVTMCTIGYGDIAPL 158

Query: 333 TPTTKLFSCVFVLVGFGLIHVLLTGALSYVLDLQENMILTSIQVG--DHSGFSAKKYIFD 506
           TP TK+F+CVFVLVGFG I +LL+G ++YVLDLQENMILT IQVG     GFSA+ YI D
Sbjct: 159 TPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQVGGAPAGGFSARNYIVD 218


>emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]
          Length = 390

 Score =  148 bits (374), Expect = 4e-34
 Identities = 73/120 (60%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
 Frame = +3

Query: 153 SFSLIKQSMFXXXXXXXXXXXXXXXNREQYSGVETHPVVDAFYFCIITMCTIGYGDITPL 332
           S S+I+Q+ F               NR+ +SG+ETH VVDA YFCI+TMCTIGYGDI PL
Sbjct: 99  STSIIRQAFFLLFLYLSLGVVIYSFNRDNFSGIETHAVVDALYFCIVTMCTIGYGDIAPL 158

Query: 333 TPTTKLFSCVFVLVGFGLIHVLLTGALSYVLDLQENMILTSIQVG--DHSGFSAKKYIFD 506
           TP TK+F+CVFVLVGFG I +LL+G ++YVLDLQENMILT IQVG     GFSA+ YI D
Sbjct: 159 TPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQVGGAPAGGFSARNYIVD 218


>ref|XP_003554573.1| PREDICTED: probable calcium-activated outward-rectifying potassium
           channel 5, chloroplastic-like [Glycine max]
          Length = 385

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/120 (58%), Positives = 89/120 (74%), Gaps = 2/120 (1%)
 Frame = +3

Query: 153 SFSLIKQSMFXXXXXXXXXXXXXXXNREQYSGVETHPVVDAFYFCIITMCTIGYGDITPL 332
           S S+I+Q M+               NR+++SG+ETHPVVDA YFCI+TMCTIGYGDI PL
Sbjct: 94  SSSIIRQGMWLLAVYLSIGVVIYSFNRDRFSGIETHPVVDALYFCIVTMCTIGYGDIAPL 153

Query: 333 TPTTKLFSCVFVLVGFGLIHVLLTGALSYVLDLQENMILTSIQVG--DHSGFSAKKYIFD 506
           TP TK+F+C FVLVGFG I +LL+G +++VLDLQENMILT +Q+G  +  GFSA+ YI D
Sbjct: 154 TPFTKIFACAFVLVGFGFIDILLSGLVNFVLDLQENMILTGLQMGASEREGFSARNYIVD 213


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