BLASTX nr result

ID: Coptis25_contig00034406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034406
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273008.1| PREDICTED: LRR receptor-like serine/threonin...   231   1e-58
ref|XP_002327773.1| predicted protein [Populus trichocarpa] gi|2...   228   5e-58
ref|XP_002280730.1| PREDICTED: probable leucine-rich repeat rece...   228   9e-58
ref|XP_002310285.1| predicted protein [Populus trichocarpa] gi|2...   227   1e-57
ref|NP_001241130.1| LRR receptor-like serine/threonine-protein k...   219   2e-55

>ref|XP_002273008.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2
           [Vitis vinifera] gi|147819728|emb|CAN73589.1|
           hypothetical protein VITISV_026204 [Vitis vinifera]
          Length = 422

 Score =  231 bits (588), Expect = 1e-58
 Identities = 107/156 (68%), Positives = 126/156 (80%)
 Frame = +2

Query: 158 LFTKGDSRTHWGDTEVLKQLKKRFDPSSVTPGSCVSSWDFKLDPCDHIYSEHFTCGFRCD 337
           LF  GDS+T+WGD EVLK+L+K  DP SV PGSC+SSWDF +DPCD ++ E FTCGFRCD
Sbjct: 20  LFFLGDSKTYWGDIEVLKELRKGLDPGSVIPGSCLSSWDFSVDPCDSVFGERFTCGFRCD 79

Query: 338 IVVSEKSRVTEISLDRAGYTGSLSSVFWNLPYLETLDLSENFFTGSIPNSLSKLIHLRRL 517
           +VVS  SRVTEISLD+AGY GSLSS  WNLPYLETLDLS+NFF+GS+  SLS L  LRRL
Sbjct: 80  VVVSGSSRVTEISLDQAGYAGSLSSASWNLPYLETLDLSDNFFSGSVSASLSNLTRLRRL 139

Query: 518 ALSRNSFTGAIPASLGSLSKLEELYLDNNHLQGPIP 625
            LSRNSF+G IP S+G +  LEELYLD+N  +G +P
Sbjct: 140 GLSRNSFSGEIPTSIGFMHSLEELYLDSNGFEGAVP 175


>ref|XP_002327773.1| predicted protein [Populus trichocarpa] gi|222836858|gb|EEE75251.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  228 bits (582), Expect = 5e-58
 Identities = 106/156 (67%), Positives = 129/156 (82%)
 Frame = +2

Query: 158 LFTKGDSRTHWGDTEVLKQLKKRFDPSSVTPGSCVSSWDFKLDPCDHIYSEHFTCGFRCD 337
           L  + +S+T+WGD EVLK++K   +P+SV+PGSC+S+WDF +DPCDH++SE FTCGFRCD
Sbjct: 20  LLVEVESKTYWGDLEVLKEVKTAVNPNSVSPGSCLSAWDFTVDPCDHLFSEKFTCGFRCD 79

Query: 338 IVVSEKSRVTEISLDRAGYTGSLSSVFWNLPYLETLDLSENFFTGSIPNSLSKLIHLRRL 517
           IVVS  SRVTE+SLD+AGY+G+LSS+ WNLPYL+TLDLS N+F G IP SLS L  LRRL
Sbjct: 80  IVVSGSSRVTELSLDQAGYSGTLSSITWNLPYLQTLDLSNNYFYGQIPESLSNLTQLRRL 139

Query: 518 ALSRNSFTGAIPASLGSLSKLEELYLDNNHLQGPIP 625
            LSRN   G IP S+GSLS LEELYLDNN+LQG IP
Sbjct: 140 GLSRNLLYGEIPTSIGSLSSLEELYLDNNNLQGNIP 175


>ref|XP_002280730.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase At1g35710 [Vitis vinifera]
           gi|302142590|emb|CBI19793.3| unnamed protein product
           [Vitis vinifera]
          Length = 427

 Score =  228 bits (580), Expect = 9e-58
 Identities = 106/157 (67%), Positives = 128/157 (81%)
 Frame = +2

Query: 155 ELFTKGDSRTHWGDTEVLKQLKKRFDPSSVTPGSCVSSWDFKLDPCDHIYSEHFTCGFRC 334
           E+   GDSRTH GD ++LK  K   +P S+TPGSC+SSWDF +DPCD+++S+ FTCGFRC
Sbjct: 23  EVVITGDSRTHSGDIQILKDFKNGLNPGSITPGSCLSSWDFSVDPCDYLFSDRFTCGFRC 82

Query: 335 DIVVSEKSRVTEISLDRAGYTGSLSSVFWNLPYLETLDLSENFFTGSIPNSLSKLIHLRR 514
           D +V+  SRVTEI+LD+AGYTG+LSS  WNLP+L+ LDLS+N F+GSIP+S S L  LRR
Sbjct: 83  DRLVAGASRVTEITLDQAGYTGTLSSSTWNLPFLQFLDLSDNSFSGSIPDSFSNLTRLRR 142

Query: 515 LALSRNSFTGAIPASLGSLSKLEELYLDNNHLQGPIP 625
           L LSRNSF+G IP SLGSL  LEELYLDNNHLQGPIP
Sbjct: 143 LTLSRNSFSGEIPNSLGSLPNLEELYLDNNHLQGPIP 179


>ref|XP_002310285.1| predicted protein [Populus trichocarpa] gi|222853188|gb|EEE90735.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  227 bits (579), Expect = 1e-57
 Identities = 106/151 (70%), Positives = 126/151 (83%)
 Frame = +2

Query: 173 DSRTHWGDTEVLKQLKKRFDPSSVTPGSCVSSWDFKLDPCDHIYSEHFTCGFRCDIVVSE 352
           +S+T WGD EVLK++K   D +SV PGSC+SSWDF +DPCD ++SE FTCGFRCDIVVSE
Sbjct: 16  ESKTFWGDIEVLKEVKSAVDRNSVNPGSCLSSWDFTVDPCDSLFSESFTCGFRCDIVVSE 75

Query: 353 KSRVTEISLDRAGYTGSLSSVFWNLPYLETLDLSENFFTGSIPNSLSKLIHLRRLALSRN 532
            SRVTE+SLD+AGY+GSL+S+ WNLPYL+TLDLS NFF G IP S+S L  L RL LSRN
Sbjct: 76  SSRVTELSLDQAGYSGSLASISWNLPYLQTLDLSNNFFYGQIPESVSNLTQLSRLGLSRN 135

Query: 533 SFTGAIPASLGSLSKLEELYLDNNHLQGPIP 625
            F+G IP S+GSLS+LEELYLDNN+LQG IP
Sbjct: 136 MFSGEIPTSIGSLSRLEELYLDNNNLQGIIP 166


>ref|NP_001241130.1| LRR receptor-like serine/threonine-protein kinase GSO1-like
           precursor [Glycine max] gi|223452518|gb|ACM89586.1|
           leucine-rich repeat family protein [Glycine max]
          Length = 422

 Score =  219 bits (559), Expect = 2e-55
 Identities = 103/150 (68%), Positives = 126/150 (84%)
 Frame = +2

Query: 176 SRTHWGDTEVLKQLKKRFDPSSVTPGSCVSSWDFKLDPCDHIYSEHFTCGFRCDIVVSEK 355
           S+TH GD EVLK+LK+  DP+SV PGSCVSSWDF +DPCD+++ E FTCGFRCD+VVS  
Sbjct: 24  SKTHVGDAEVLKELKQGLDPASVKPGSCVSSWDFTVDPCDNLFGEKFTCGFRCDVVVSGL 83

Query: 356 SRVTEISLDRAGYTGSLSSVFWNLPYLETLDLSENFFTGSIPNSLSKLIHLRRLALSRNS 535
           SRVTE++LD+AGY+GSLSS  WNLPYL+TLDLS N+F+G IP S S L  L RL+LS NS
Sbjct: 84  SRVTELTLDQAGYSGSLSSFTWNLPYLQTLDLSNNYFSGQIPYSFSNLTRLSRLSLSFNS 143

Query: 536 FTGAIPASLGSLSKLEELYLDNNHLQGPIP 625
           F+G IP+SLG+LS L+ELYLDNN+L+G IP
Sbjct: 144 FSGEIPSSLGTLSDLQELYLDNNNLRGAIP 173


Top