BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034395
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...    69   3e-10
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    61   8e-08
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo...    60   1e-07
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G...    60   1e-07
emb|CCH50966.1| T4.5 [Malus x robusta]                                 60   2e-07

>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
 Frame = +3

Query: 36  SFKSPQPDPASLPPSAFIGMKTSPNI*HSRLGHPSITTSRHVTNDFEYPLNGKTMTSFCN 215
           S++   P P S    A+  +K S +  H RLGHPSITT + V N F  P +  +  S CN
Sbjct: 427 SWRRLYPLPHSSLKQAYSAIKLSLDRWHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCN 486

Query: 216 ACEYGKSTKPPFTLSY*KTTTHLQLIHS-LWGPAP 317
           AC+  KS + PF +S   +   L+L+ S +WGPAP
Sbjct: 487 ACQQAKSHQLPFPISSSVSKHPLELVFSDVWGPAP 521


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +3

Query: 117 HSRLGHPSITTSRHVTNDFEYPLNGKTMTSFCNACEYGKSTKPPFTLSY*KTTTHLQLIH 296
           H RLGHPS  T ++V +        K  ++FC++C  GK  + PF+LS+   T  L+LIH
Sbjct: 525 HKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELIH 584

Query: 297 -SLWGPAPVNYNSGYS*Y 347
             LWGP  V  NSGY  Y
Sbjct: 585 LDLWGPTLVLSNSGYRYY 602


>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
          Length = 499

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
 Frame = +3

Query: 3   QGLYPFHQLSSSFKSPQPDPASLPPSAFIGMKTSPNI*HSRLGHPSITTSRHVTNDFEYP 182
           +GLYP      SF + Q          F  +K SP+  H RLGHPS    + V +    P
Sbjct: 303 RGLYPL----KSFPNKQ---------VFAAIKLSPSQWHCRLGHPSSVIVQQVLSHNNLP 349

Query: 183 -LNGKTMTSFCNACEYGKSTKPPFTLSY*KTTTHLQLIHS-LWGPAPVN 323
            ++     S C+AC+ GKS + P++ S  +++  L+LIHS +WGPAP +
Sbjct: 350 CVSESNKHSVCDACQKGKSHQLPYSKSLSRSSAPLELIHSDVWGPAPTS 398


>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 572

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
 Frame = +3

Query: 3   QGLYPFHQLSSSFKSPQPDPASLPPSAFIGMKTSPNI*HSRLGHPSITTSRHVTNDFEYP 182
           +GLYP      SF + Q          F  +K SP+  H RLGHPS    + V +    P
Sbjct: 376 RGLYPL----KSFPNKQ---------VFAAIKLSPSQWHCRLGHPSSVIVQQVLSHNNLP 422

Query: 183 -LNGKTMTSFCNACEYGKSTKPPFTLSY*KTTTHLQLIHS-LWGPAPVN 323
            ++     S C+AC+ GKS + P++ S  +++  L+LIHS +WGPAP +
Sbjct: 423 CVSESNKHSVCDACQKGKSHQLPYSKSLSRSSAPLELIHSDVWGPAPTS 471


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
 Frame = +3

Query: 6    GLYPFHQLSSSFKSPQPDPASLPPSAFIGMKTSPNI*HSRLGHPSITTSRHVTNDFEYPL 185
            GLYPF+  +S+  S      ++ P+A +  K   +  H RLGHPS  T   V +    P+
Sbjct: 700  GLYPFYWNASNGVSG----IAISPTALMIAKADIHTWHRRLGHPSGGTLHSVVHKNHLPV 755

Query: 186  NGKTMT-SFCNACEYGKSTKPPFTLSY*KTTTHLQLIHS-LWGPAPVNYNSGYS*Y 347
             G     S C AC+ GKS +  F+     ++  LQL+H+ +WGP+P +  +GY  Y
Sbjct: 756  IGYVNNMSVCTACQLGKSYRLSFSTLPCTSSRPLQLLHTDVWGPSPTSSCTGYRFY 811