BLASTX nr result

ID: Coptis25_contig00034387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034387
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   120   2e-25
ref|XP_002332980.1| predicted protein [Populus trichocarpa] gi|2...   115   8e-24
ref|XP_002303887.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-22
ref|XP_002303885.1| predicted protein [Populus trichocarpa] gi|2...   109   6e-22
ref|XP_002304747.1| predicted protein [Populus trichocarpa] gi|2...   108   1e-21

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  120 bits (302), Expect = 2e-25
 Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 3/135 (2%)
 Frame = -3

Query: 397 VMGEMTEHTSINIIEDELVSSILGD-IAMVSGLTAKCCIYRVHDNLRALKERTYSPHLVS 221
           +  E +E    N   D L+++ + + ++ ++ L ++CCIYRV D LR + E  + P ++S
Sbjct: 6   IASEQSERREANGNADSLLAASINEKLSSLTSLPSQCCIYRVPDTLRRVNEEAFVPRILS 65

Query: 220 IGPLHHGN--LKSMEKHKWLYLKSFLGPNPLMLVENYVQVFRGFEVDARRCYAETFSLSS 47
           IGP+HHG   L+ ME HKW YLK+ L   P  +VE YV+  R  E   R CYAE     S
Sbjct: 66  IGPVHHGKKRLRDMEGHKWQYLKALLQRKPGTMVERYVKAMRELEARTRGCYAEIIKFDS 125

Query: 46  NEFVKMMLLDGCFII 2
           +EFV MMLLDGCFII
Sbjct: 126 DEFVTMMLLDGCFII 140


>ref|XP_002332980.1| predicted protein [Populus trichocarpa] gi|222834311|gb|EEE72788.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  115 bits (288), Expect = 8e-24
 Identities = 60/130 (46%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
 Frame = -3

Query: 385 MTEHTSINIIEDELVSSILGDIAMVSGLTAKCCIYRVHDNLRALKERTYSPHLVSIGPLH 206
           M +   +++  +EL +S+   + +    +  CCIYRV + LR L E+ Y+P +VSIGPLH
Sbjct: 1   MDQSDEVSLDINELANSLREQLKIKKAFSQACCIYRVPERLRKLNEKAYTPRVVSIGPLH 60

Query: 205 HG--NLKSMEKHKWLYLKSFLGPNPLMLVENYVQVFRGFEVDARRCYAETFSLSSNEFVK 32
           HG  NLK+ME HK +YL+ FL  N L+ VE+ V V +  E   R CYAET SLS  +F  
Sbjct: 61  HGKENLKAMEDHKIMYLQQFLEQNLLVSVEDLVYVIKENETALRDCYAETISLSRKDFAT 120

Query: 31  MMLLDGCFII 2
           M+LLD  FII
Sbjct: 121 MILLDAVFII 130


>ref|XP_002303887.1| predicted protein [Populus trichocarpa]
           gi|224098234|ref|XP_002334569.1| predicted protein
           [Populus trichocarpa] gi|222841319|gb|EEE78866.1|
           predicted protein [Populus trichocarpa]
           gi|222873183|gb|EEF10314.1| predicted protein [Populus
           trichocarpa]
          Length = 428

 Score =  110 bits (274), Expect = 3e-22
 Identities = 55/130 (42%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
 Frame = -3

Query: 385 MTEHTSINIIEDELVSSILGDIAMVSGLTAKCCIYRVHDNLRALKERTYSPHLVSIGPLH 206
           M +   +++  +EL  S+   + +    +  CCIYRV + LR L E+ Y+P +VSIGP+H
Sbjct: 1   MDQSDEVSLDVNELAISLREQLKIKKAFSLACCIYRVPERLRKLNEKAYTPRVVSIGPIH 60

Query: 205 HG--NLKSMEKHKWLYLKSFLGPNPLMLVENYVQVFRGFEVDARRCYAETFSLSSNEFVK 32
           HG  NLK+ME HK +YL+ FL  N L+ VE+ + + +  E + R  YAET +L   +FV 
Sbjct: 61  HGKENLKAMEDHKIMYLQQFLEQNLLVSVEDLINIIKENETELRDSYAETINLGRKDFVT 120

Query: 31  MMLLDGCFII 2
           M+LLD  FII
Sbjct: 121 MILLDAVFII 130


>ref|XP_002303885.1| predicted protein [Populus trichocarpa] gi|222841317|gb|EEE78864.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  109 bits (272), Expect = 6e-22
 Identities = 54/119 (45%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
 Frame = -3

Query: 352 DELVSSILGDIAMVSGLTAKCCIYRVHDNLRALKERTYSPHLVSIGPLHHG--NLKSMEK 179
           +E+ +S+   + +    +  CCIYRV + LR L E+ Y+P  VSIGPLHHG  NLK+ME 
Sbjct: 12  NEIANSLREQLKIKKAFSRACCIYRVPERLRKLNEKAYTPRAVSIGPLHHGKENLKAMED 71

Query: 178 HKWLYLKSFLGPNPLMLVENYVQVFRGFEVDARRCYAETFSLSSNEFVKMMLLDGCFII 2
           HK +YL+ FLG N L+ +E+ + + +  E   R  YAET  LS  +F  M+LLD  FII
Sbjct: 72  HKIMYLQQFLGHNSLVSLEDLINIIKENETKLRDSYAETIDLSRKDFATMILLDAVFII 130


>ref|XP_002304747.1| predicted protein [Populus trichocarpa] gi|222842179|gb|EEE79726.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  108 bits (270), Expect = 1e-21
 Identities = 54/131 (41%), Positives = 83/131 (63%), Gaps = 2/131 (1%)
 Frame = -3

Query: 388 EMTEHTSINIIEDELVSSILGDIAMVSGLTAKCCIYRVHDNLRALKERTYSPHLVSIGPL 209
           E++   S++I  D L  S+  ++ + +  +  CCIY+V + LR L E+ Y+P LVSIGP+
Sbjct: 12  ELSHQVSLDI--DRLAQSVTEELEISNPFSDTCCIYKVPERLRELNEKAYTPRLVSIGPI 69

Query: 208 HHGN--LKSMEKHKWLYLKSFLGPNPLMLVENYVQVFRGFEVDARRCYAETFSLSSNEFV 35
           HHGN  LK+ME HK +YLK F+    +  V+ ++++ +  E   R CYAET   SS  F+
Sbjct: 70  HHGNDKLKAMEDHKRMYLKEFIARTKVS-VKGFIELIKEKETRLRNCYAETNGFSSEYFI 128

Query: 34  KMMLLDGCFII 2
           KM+L+D  F+I
Sbjct: 129 KMILMDAAFVI 139


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