BLASTX nr result

ID: Coptis25_contig00034372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034372
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    63   1e-07
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    58   3e-06
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    57   1e-05

>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 31/81 (38%), Positives = 49/81 (60%)
 Frame = -1

Query: 443 VKLNCDGSMSKDGVGYGGMGRDEYGNVLFAFTSGGSVRSILYQELKAIEQGLVICTGMNV 264
           +KLN DGS+ +   G+GG+ RD  GN + AF S   +  I   EL AI +GLV+  G+ +
Sbjct: 282 IKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGLVLALGLGI 341

Query: 263 REVIVASDSLHAI*ILSEAES 201
           + + V SDS+ A+  ++  +S
Sbjct: 342 KVIWVESDSMSAVKTINRVQS 362


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 28/72 (38%), Positives = 44/72 (61%)
 Frame = -1

Query: 440 KLNCDGSMSKDGVGYGGMGRDEYGNVLFAFTSGGSVRSILYQELKAIEQGLVICTGMNVR 261
           KLN DGS+ +   G+GG+ RD  G+ + A+ S      I   EL AI +GLV+ +G+ ++
Sbjct: 277 KLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIK 336

Query: 260 EVIVASDSLHAI 225
            + V SDS+ A+
Sbjct: 337 AIWVESDSMSAV 348


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 27/72 (37%), Positives = 43/72 (59%)
 Frame = -1

Query: 440 KLNCDGSMSKDGVGYGGMGRDEYGNVLFAFTSGGSVRSILYQELKAIEQGLVICTGMNVR 261
           KLN DGS+ +   G+GG+ RD  G+ + A+ S      I   EL AI +GLV+ +G+ ++
Sbjct: 164 KLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIK 223

Query: 260 EVIVASDSLHAI 225
            + V SDS+  +
Sbjct: 224 AIWVESDSMSVV 235


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