BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034368
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633077.1| PREDICTED: actin-related protein 6 isoform 2...   194   8e-48
ref|XP_002285295.1| PREDICTED: actin-related protein 6 isoform 1...   194   8e-48
ref|XP_002527184.1| conserved hypothetical protein [Ricinus comm...   182   3e-44
ref|XP_002324643.1| actin related protein [Populus trichocarpa] ...   177   6e-43
gb|ABK95736.1| unknown [Populus trichocarpa]                          177   6e-43

>ref|XP_003633077.1| PREDICTED: actin-related protein 6 isoform 2 [Vitis vinifera]
          Length = 385

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/125 (73%), Positives = 107/125 (85%)
 Frame = +2

Query: 35  SSNVVVVDNGAGYIKAGIGGDRDPKLVVPNCIGKPLSSKKFLYPDQLQSQDDLTSVTTRR 214
           +SNVVV+DNG G IKAGIGG+RDP  V+PNC+GKP SSKK+L  DQL S  DLTSV+ RR
Sbjct: 3   TSNVVVLDNGGGLIKAGIGGERDPSAVIPNCMGKPPSSKKWLMGDQLHSHSDLTSVSLRR 62

Query: 215 PFDRGYLTNPDLQKEIWSHIFKTLLHINPNTSSLLLTEPLFNLPSIQHSMDEIVFEDLGF 394
           PFDRGYL NPDLQ++IWSH+F  LL I+P+ SSLLL EPLFNLPSIQ S+DE+VFEDLGF
Sbjct: 63  PFDRGYLLNPDLQRDIWSHLFSNLLRISPSQSSLLLVEPLFNLPSIQRSIDELVFEDLGF 122

Query: 395 KSLFV 409
           +SLFV
Sbjct: 123 RSLFV 127


>ref|XP_002285295.1| PREDICTED: actin-related protein 6 isoform 1 [Vitis vinifera]
           gi|297738970|emb|CBI28215.3| unnamed protein product
           [Vitis vinifera]
          Length = 433

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/125 (73%), Positives = 107/125 (85%)
 Frame = +2

Query: 35  SSNVVVVDNGAGYIKAGIGGDRDPKLVVPNCIGKPLSSKKFLYPDQLQSQDDLTSVTTRR 214
           +SNVVV+DNG G IKAGIGG+RDP  V+PNC+GKP SSKK+L  DQL S  DLTSV+ RR
Sbjct: 3   TSNVVVLDNGGGLIKAGIGGERDPSAVIPNCMGKPPSSKKWLMGDQLHSHSDLTSVSLRR 62

Query: 215 PFDRGYLTNPDLQKEIWSHIFKTLLHINPNTSSLLLTEPLFNLPSIQHSMDEIVFEDLGF 394
           PFDRGYL NPDLQ++IWSH+F  LL I+P+ SSLLL EPLFNLPSIQ S+DE+VFEDLGF
Sbjct: 63  PFDRGYLLNPDLQRDIWSHLFSNLLRISPSQSSLLLVEPLFNLPSIQRSIDELVFEDLGF 122

Query: 395 KSLFV 409
           +SLFV
Sbjct: 123 RSLFV 127


>ref|XP_002527184.1| conserved hypothetical protein [Ricinus communis]
           gi|223533449|gb|EEF35197.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 449

 Score =  182 bits (461), Expect = 3e-44
 Identities = 80/124 (64%), Positives = 102/124 (82%)
 Frame = +2

Query: 38  SNVVVVDNGAGYIKAGIGGDRDPKLVVPNCIGKPLSSKKFLYPDQLQSQDDLTSVTTRRP 217
           SNV+V+DNG GYIKAG GG+RDP  ++PNC+ +PLSSKK+L+P    + +DLTS   RRP
Sbjct: 22  SNVIVLDNGGGYIKAGHGGERDPVTIIPNCVYRPLSSKKYLHPSSSTTTEDLTSAVIRRP 81

Query: 218 FDRGYLTNPDLQKEIWSHIFKTLLHINPNTSSLLLTEPLFNLPSIQHSMDEIVFEDLGFK 397
            DRGYL NPDLQ++IW+H+F +LLH+ P++SSLLLTEPLF LPSIQ + DE+VFED GF 
Sbjct: 82  IDRGYLINPDLQRDIWNHVFTSLLHVTPSSSSLLLTEPLFTLPSIQRATDELVFEDFGFN 141

Query: 398 SLFV 409
           SLF+
Sbjct: 142 SLFI 145


>ref|XP_002324643.1| actin related protein [Populus trichocarpa]
           gi|222866077|gb|EEF03208.1| actin related protein
           [Populus trichocarpa]
          Length = 375

 Score =  177 bits (450), Expect = 6e-43
 Identities = 81/124 (65%), Positives = 102/124 (82%)
 Frame = +2

Query: 38  SNVVVVDNGAGYIKAGIGGDRDPKLVVPNCIGKPLSSKKFLYPDQLQSQDDLTSVTTRRP 217
           S+VVV+DNG G IKAG GG+RDP  ++PNC+ +PLSSKKFL+P    +++DLTS   RRP
Sbjct: 2   SSVVVLDNGGGLIKAGYGGERDPSTIIPNCLYRPLSSKKFLHPTPT-TEEDLTSAAVRRP 60

Query: 218 FDRGYLTNPDLQKEIWSHIFKTLLHINPNTSSLLLTEPLFNLPSIQHSMDEIVFEDLGFK 397
            DRGYL NPDLQ++IW+H+F  LLHINP+ SSLLLTEPLF+LPSI+ + DE+VFED GF 
Sbjct: 61  IDRGYLINPDLQRDIWNHLFSNLLHINPSNSSLLLTEPLFSLPSIERATDELVFEDFGFN 120

Query: 398 SLFV 409
           SLF+
Sbjct: 121 SLFI 124


>gb|ABK95736.1| unknown [Populus trichocarpa]
          Length = 424

 Score =  177 bits (450), Expect = 6e-43
 Identities = 81/124 (65%), Positives = 102/124 (82%)
 Frame = +2

Query: 38  SNVVVVDNGAGYIKAGIGGDRDPKLVVPNCIGKPLSSKKFLYPDQLQSQDDLTSVTTRRP 217
           S+VVV+DNG G IKAG GG+RDP  ++PNC+ +PLSSKKFL+P    +++DLTS   RRP
Sbjct: 2   SSVVVLDNGGGLIKAGYGGERDPSTIIPNCLYRPLSSKKFLHPTPT-TEEDLTSAAVRRP 60

Query: 218 FDRGYLTNPDLQKEIWSHIFKTLLHINPNTSSLLLTEPLFNLPSIQHSMDEIVFEDLGFK 397
            DRGYL NPDLQ++IW+H+F  LLHINP+ SSLLLTEPLF+LPSI+ + DE+VFED GF 
Sbjct: 61  IDRGYLINPDLQRDIWNHLFSNLLHINPSNSSLLLTEPLFSLPSIERATDELVFEDFGFN 120

Query: 398 SLFV 409
           SLF+
Sbjct: 121 SLFI 124