BLASTX nr result

ID: Coptis25_contig00034364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034364
         (982 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25268.3| unnamed protein product [Vitis vinifera]              124   5e-26
ref|XP_003632909.1| PREDICTED: uncharacterized protein LOC100853...   117   6e-24
ref|XP_003542140.1| PREDICTED: uncharacterized protein LOC100816...   111   2e-22
ref|XP_003546908.1| PREDICTED: uncharacterized protein LOC100805...   108   3e-21
ref|XP_002512751.1| conserved hypothetical protein [Ricinus comm...   107   4e-21

>emb|CBI25268.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  124 bits (310), Expect = 5e-26
 Identities = 96/307 (31%), Positives = 128/307 (41%), Gaps = 72/307 (23%)
 Frame = +2

Query: 32   QMQQAYMNSLRHVSTNPSMVSSLNGTAVRTFGQDQSGH--PVRVNDAL-TDAAIAITELS 202
            Q+Q+ YMN LR+ S  PSM S        T  Q+QSG   P     A  T       +  
Sbjct: 436  QLQERYMN-LRNFSPGPSMASPSVWGIEGTTRQEQSGELFPTYEGSATSTFEGHPFQKRR 494

Query: 203  SIQPQXXXXXXXXXXXGKRVPAGEIP---GAQPA---------------KVLLGPSLS-- 322
             +QP             +    G  P   G Q A               K LLGP+ +  
Sbjct: 495  EVQPALQLFPPNEVIAAQATEGGLFPKRIGVQSASNLGRTQDRCPVQSTKDLLGPAFTAG 554

Query: 323  -----------------------GKPVPVAGGVELIRTSEGLPGQTSQRSIIPNASTTLR 433
                                   G+ +PVA G  L +T+      + +RS +        
Sbjct: 555  QGITVAKGNGLPSRDHHGHPLADGQVIPVAQGNVLSQTTNVFDAPSRKRSAVQTPQAAPY 614

Query: 434  AARGRRTPQPLVNRSTP--------TVSKTSPVY------------------HLKWKDPT 535
              R +  PQP +  S P        ++S + P+                   H+KW+   
Sbjct: 615  VPRRKTRPQPSIRPSIPFPAPMPRPSISPSIPLRARLPQPSTNPFVPSSAAPHVKWQGFD 674

Query: 536  DLYQSSGENCHLCKRDLTFTPTGPVTQPSVPPAVAVLPCGHTFHDECLQLITPADLSKDP 715
               + SG  C +CKRD+++ P G + QP++PPAVAVLPCGH FHD CLQLITP D SKDP
Sbjct: 675  GSPELSGLKCLICKRDVSYAPEGHIFQPAIPPAVAVLPCGHIFHDHCLQLITPKDQSKDP 734

Query: 716  PCIPCAI 736
            PCIPCAI
Sbjct: 735  PCIPCAI 741


>ref|XP_003632909.1| PREDICTED: uncharacterized protein LOC100853391 [Vitis vinifera]
          Length = 109

 Score =  117 bits (292), Expect = 6e-24
 Identities = 54/96 (56%), Positives = 65/96 (67%)
 Frame = +2

Query: 449 RTPQPLVNRSTPTVSKTSPVYHLKWKDPTDLYQSSGENCHLCKRDLTFTPTGPVTQPSVP 628
           R PQP  N   P+    S   H+KW+      + SG  C +CKRD+++ P G + QP++P
Sbjct: 15  RLPQPSTNPFVPS----SAAPHVKWQGFDGSPELSGLKCLICKRDVSYAPEGHIFQPAIP 70

Query: 629 PAVAVLPCGHTFHDECLQLITPADLSKDPPCIPCAI 736
           PAVAVLPCGH FHD CLQLITP D SKDPPCIPCAI
Sbjct: 71  PAVAVLPCGHIFHDHCLQLITPKDQSKDPPCIPCAI 106


>ref|XP_003542140.1| PREDICTED: uncharacterized protein LOC100816300 [Glycine max]
          Length = 698

 Score =  111 bits (278), Expect = 2e-22
 Identities = 57/116 (49%), Positives = 74/116 (63%)
 Frame = +2

Query: 389 TSQRSIIPNASTTLRAARGRRTPQPLVNRSTPTVSKTSPVYHLKWKDPTDLYQSSGENCH 568
           TS R+   N     +A   +R   P++  S P ++      ++K+KD T   + SG  C 
Sbjct: 588 TSPRTNQSNHQMLAQALAHQRLKAPIIP-SAPRIASN----YIKFKDQTA--EPSGYKCL 640

Query: 569 LCKRDLTFTPTGPVTQPSVPPAVAVLPCGHTFHDECLQLITPADLSKDPPCIPCAI 736
           LCKRDL++ P GP++QP VPPA AVLPCGHTFHD CL+ ITP D SK PPCIPCA+
Sbjct: 641 LCKRDLSYAPEGPISQPPVPPATAVLPCGHTFHDYCLERITPDDQSKYPPCIPCAL 696


>ref|XP_003546908.1| PREDICTED: uncharacterized protein LOC100805304 [Glycine max]
          Length = 696

 Score =  108 bits (269), Expect = 3e-21
 Identities = 57/126 (45%), Positives = 76/126 (60%)
 Frame = +2

Query: 359 IRTSEGLPGQTSQRSIIPNASTTLRAARGRRTPQPLVNRSTPTVSKTSPVYHLKWKDPTD 538
           I +S      TS  +   N     RA   +R   P++  S P+++      ++K+KD T 
Sbjct: 576 ISSSHHPSSHTSPCTNQSNHQALARALTRQRLKAPIIP-SAPSIASN----YIKFKDQTA 630

Query: 539 LYQSSGENCHLCKRDLTFTPTGPVTQPSVPPAVAVLPCGHTFHDECLQLITPADLSKDPP 718
             +  G  C LCKRDL++ P GP++QP VPPA AVLPCGHTFH+ CL+ ITP D SK PP
Sbjct: 631 --EPIGYKCLLCKRDLSYAPEGPISQPPVPPATAVLPCGHTFHEYCLERITPDDQSKYPP 688

Query: 719 CIPCAI 736
           CIPCA+
Sbjct: 689 CIPCAL 694


>ref|XP_002512751.1| conserved hypothetical protein [Ricinus communis]
           gi|223547762|gb|EEF49254.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 751

 Score =  107 bits (267), Expect = 4e-21
 Identities = 55/118 (46%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
 Frame = +2

Query: 401 SIIPNASTTLRAARGRRTPQPLVNRSTPTVSKTSPVYH------LKWKDPTDLYQSSGEN 562
           S+ P    T+R     R P    +   P++++TSP+ +      +  KD   L  S G  
Sbjct: 635 SLSPRIPHTIRC----RPPLSYTSSHLPSLARTSPLRNFDRILLIAAKDEKTLVPS-GNK 689

Query: 563 CHLCKRDLTFTPTGPVTQPSVPPAVAVLPCGHTFHDECLQLITPADLSKDPPCIPCAI 736
           C++C RDL+FTP GP+ QP  P  VAVLPCGH FHD CLQ ITP D ++DPPCIPCAI
Sbjct: 690 CYICNRDLSFTPEGPIDQPKQPIPVAVLPCGHHFHDSCLQRITPEDQAQDPPCIPCAI 747


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