BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034354
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-42
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-42
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   176   1e-42

>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  179 bits (454), Expect = 2e-43
 Identities = 81/108 (75%), Positives = 99/108 (91%)
 Frame = -2

Query: 324 DHVTFVSLLSACSHAGLIDQGQQCFKLMQEKYCIQPGLKHFGCIVDLLGRAGHLDMAYDF 145
           DHVTFVSLLSACSH+G +++G+ CF+LMQE Y I+P LKH+GC+VDLLGRAG+L+MAYDF
Sbjct: 620 DHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDF 678

Query: 144 IKNMPVRPDASVWGALLGACRIHGNVELGALASEHLFEVDVENVGYYV 1
           IK+MP++PDAS+WGALLGACRIHGN+ELG  AS+ LFEVD +NVGYYV
Sbjct: 679 IKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYV 726


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  179 bits (454), Expect = 2e-43
 Identities = 81/108 (75%), Positives = 99/108 (91%)
 Frame = -2

Query: 324 DHVTFVSLLSACSHAGLIDQGQQCFKLMQEKYCIQPGLKHFGCIVDLLGRAGHLDMAYDF 145
           DHVTFVSLLSACSH+G +++G+ CF+LMQE Y I+P LKH+GC+VDLLGRAG+L+MAYDF
Sbjct: 387 DHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDF 445

Query: 144 IKNMPVRPDASVWGALLGACRIHGNVELGALASEHLFEVDVENVGYYV 1
           IK+MP++PDAS+WGALLGACRIHGN+ELG  AS+ LFEVD +NVGYYV
Sbjct: 446 IKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYV 493


>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
           gi|449476583|ref|XP_004154777.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  176 bits (447), Expect = 1e-42
 Identities = 79/108 (73%), Positives = 94/108 (87%)
 Frame = -2

Query: 324 DHVTFVSLLSACSHAGLIDQGQQCFKLMQEKYCIQPGLKHFGCIVDLLGRAGHLDMAYDF 145
           DH+TFVSLLSACSH+GL+D+GQ CF+LMQE Y I+P LKH+GC+VDL GRAGHL+ A++F
Sbjct: 544 DHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNF 603

Query: 144 IKNMPVRPDASVWGALLGACRIHGNVELGALASEHLFEVDVENVGYYV 1
           +KNMPVRPD SVWGALLGACRIH NVEL    S+HL +V+ ENVGYYV
Sbjct: 604 VKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYV 651


>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  176 bits (447), Expect = 1e-42
 Identities = 82/108 (75%), Positives = 96/108 (88%)
 Frame = -2

Query: 324 DHVTFVSLLSACSHAGLIDQGQQCFKLMQEKYCIQPGLKHFGCIVDLLGRAGHLDMAYDF 145
           DHVTF+SLLSACSH+GL+D+G+  F LMQE Y I+P LKH+GC+VDLLGRAG L+MAYDF
Sbjct: 577 DHVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDF 635

Query: 144 IKNMPVRPDASVWGALLGACRIHGNVELGALASEHLFEVDVENVGYYV 1
           IK+MP+ PDAS+WGALLGACRIHGN+ELG  AS+ LFEVD ENVGYYV
Sbjct: 636 IKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYV 683


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  176 bits (447), Expect = 1e-42
 Identities = 80/108 (74%), Positives = 98/108 (90%)
 Frame = -2

Query: 324 DHVTFVSLLSACSHAGLIDQGQQCFKLMQEKYCIQPGLKHFGCIVDLLGRAGHLDMAYDF 145
           DHVTFVSLLSACSH+G +++G+ CF+LMQE Y I+P LKH+GC+VDLLGRAG+L+MAY F
Sbjct: 620 DHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYGF 678

Query: 144 IKNMPVRPDASVWGALLGACRIHGNVELGALASEHLFEVDVENVGYYV 1
           IK+MP++PDAS+WGALLGACRIHGN+ELG  AS+ LFEVD +NVGYYV
Sbjct: 679 IKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYV 726