BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034329
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633078.1| PREDICTED: thylakoid lumenal 16.5 kDa protei...    62   4e-08
ref|XP_002285317.1| PREDICTED: thylakoid lumenal 16.5 kDa protei...    62   4e-08
gb|AFK39859.1| unknown [Medicago truncatula]                           62   6e-08
ref|XP_003609357.1| Thylakoid lumenal 16.5 kDa protein [Medicago...    62   6e-08
gb|ACJ85247.1| unknown [Medicago truncatula]                           62   6e-08

>ref|XP_003633078.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic
           isoform 2 [Vitis vinifera]
          Length = 204

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 43/98 (43%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
 Frame = +3

Query: 15  NVKRHNSLTVTNGIATTESSRLIICPIITKRNLITNFTTIVTLSLAGKGFFXXXXXXXXX 194
           NVKR   LT++  ++    S     PIITKR+L     T +  SLAGKG++         
Sbjct: 42  NVKRQ--LTLSKAVSEPRPSS----PIITKRSLSITLLTSLVFSLAGKGYYSDANAAILE 95

Query: 195 XXXXK-LLEKVE-DKKKMIERQAVVSSSTTETAYLQEL 302
               + LLEKV+ D+KK IE+Q V+SSS  ET YLQEL
Sbjct: 96  ADDDEELLEKVKKDRKKRIEKQGVISSSNKETGYLQEL 133


>ref|XP_002285317.1| PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic
           isoform 1 [Vitis vinifera] gi|297738978|emb|CBI28223.3|
           unnamed protein product [Vitis vinifera]
          Length = 234

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 43/98 (43%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
 Frame = +3

Query: 15  NVKRHNSLTVTNGIATTESSRLIICPIITKRNLITNFTTIVTLSLAGKGFFXXXXXXXXX 194
           NVKR   LT++  ++    S     PIITKR+L     T +  SLAGKG++         
Sbjct: 42  NVKRQ--LTLSKAVSEPRPSS----PIITKRSLSITLLTSLVFSLAGKGYYSDANAAILE 95

Query: 195 XXXXK-LLEKVE-DKKKMIERQAVVSSSTTETAYLQEL 302
               + LLEKV+ D+KK IE+Q V+SSS  ET YLQEL
Sbjct: 96  ADDDEELLEKVKKDRKKRIEKQGVISSSNKETGYLQEL 133


>gb|AFK39859.1| unknown [Medicago truncatula]
          Length = 223

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = +3

Query: 96  ITKRNLITNFTTIVTLSLAGKGFFXXXXXXXXXXXXXKLLEKVE-DKKKMIERQAVVSSS 272
           +TKR++   F T + LSL+GKG F             +LLEKV+ D+KK +E+Q V+SSS
Sbjct: 53  VTKRDISIGFMTSLVLSLSGKGLFDANAAILEADDDAELLEKVKKDRKKRLEKQGVISSS 112

Query: 273 TTETAYLQEL 302
           T ET YLQ+L
Sbjct: 113 TKETGYLQDL 122


>ref|XP_003609357.1| Thylakoid lumenal 16.5 kDa protein [Medicago truncatula]
           gi|355510412|gb|AES91554.1| Thylakoid lumenal 16.5 kDa
           protein [Medicago truncatula]
          Length = 223

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = +3

Query: 96  ITKRNLITNFTTIVTLSLAGKGFFXXXXXXXXXXXXXKLLEKVE-DKKKMIERQAVVSSS 272
           +TKR++   F T + LSL+GKG F             +LLEKV+ D+KK +E+Q V+SSS
Sbjct: 53  VTKRDISIGFMTSLVLSLSGKGLFDANAAILEADDDVELLEKVKKDRKKRLEKQGVISSS 112

Query: 273 TTETAYLQEL 302
           T ET YLQ+L
Sbjct: 113 TKETGYLQDL 122


>gb|ACJ85247.1| unknown [Medicago truncatula]
          Length = 151

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = +3

Query: 96  ITKRNLITNFTTIVTLSLAGKGFFXXXXXXXXXXXXXKLLEKVE-DKKKMIERQAVVSSS 272
           +TKR++   F T + LSL+GKG F             +LLEKV+ D+KK +E+Q V+SSS
Sbjct: 53  VTKRDISIGFMTSLVLSLSGKGLFDANAAILEADDDVELLEKVKKDRKKRLEKQGVISSS 112

Query: 273 TTETAYLQEL 302
           T ET YLQ+L
Sbjct: 113 TKETGYLQDL 122