BLASTX nr result

ID: Coptis25_contig00034310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034310
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306083.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002313064.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_004148297.1| PREDICTED: UPF0496 protein At4g34320-like [C...   145   3e-33
ref|XP_002281050.1| PREDICTED: UPF0496 protein At4g34320-like [V...   144   6e-33
ref|XP_003537895.1| PREDICTED: UPF0496 protein At4g34320-like [G...   144   7e-33

>ref|XP_002306083.1| predicted protein [Populus trichocarpa] gi|222849047|gb|EEE86594.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  146 bits (368), Expect = 2e-33
 Identities = 71/90 (78%), Positives = 81/90 (90%)
 Frame = +2

Query: 2   LSSYEDECRLDPELQSFDATLQDRTHRVINSLAAGVEVRALSIDSLKEVTGCLLDMNQEV 181
           LSSYE  CRLD +LQSFD TLQ RT+ VIN+LA G+EVRALS DSLKEVT CLL+MNQEV
Sbjct: 29  LSSYEAACRLDKDLQSFDTTLQARTNHVINTLAVGIEVRALSFDSLKEVTECLLEMNQEV 88

Query: 182 VKIILDCKQDIWKNQELFELVEDYFENSLQ 271
           VK+IL+CK+DIWK+QELFELVE+YFENSLQ
Sbjct: 89  VKVILECKKDIWKDQELFELVEEYFENSLQ 118


>ref|XP_002313064.1| predicted protein [Populus trichocarpa] gi|222849472|gb|EEE87019.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/90 (80%), Positives = 80/90 (88%)
 Frame = +2

Query: 2   LSSYEDECRLDPELQSFDATLQDRTHRVINSLAAGVEVRALSIDSLKEVTGCLLDMNQEV 181
           LSSYE  C LD +LQSFD TLQ RT+ VIN+LA GVEVRALS DSLKEVT CLL+MNQEV
Sbjct: 29  LSSYEAACLLDKDLQSFDTTLQARTNHVINTLAVGVEVRALSFDSLKEVTECLLEMNQEV 88

Query: 182 VKIILDCKQDIWKNQELFELVEDYFENSLQ 271
           VK+IL+CK+DIWKNQELFELVE+YFENSLQ
Sbjct: 89  VKVILECKRDIWKNQELFELVEEYFENSLQ 118


>ref|XP_004148297.1| PREDICTED: UPF0496 protein At4g34320-like [Cucumis sativus]
           gi|449510317|ref|XP_004163630.1| PREDICTED: UPF0496
           protein At4g34320-like [Cucumis sativus]
          Length = 372

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/90 (76%), Positives = 80/90 (88%)
 Frame = +2

Query: 2   LSSYEDECRLDPELQSFDATLQDRTHRVINSLAAGVEVRALSIDSLKEVTGCLLDMNQEV 181
           LSSYE  C+ D +LQSFD+TLQ RTH+ IN++A GVEVRALS DSLKE+T CLL+MNQEV
Sbjct: 26  LSSYEAACKADADLQSFDSTLQARTHQAINTIAVGVEVRALSFDSLKEITECLLEMNQEV 85

Query: 182 VKIILDCKQDIWKNQELFELVEDYFENSLQ 271
           VK+IL CK+DIWKNQELFELVE+YFENSLQ
Sbjct: 86  VKVILSCKKDIWKNQELFELVEEYFENSLQ 115


>ref|XP_002281050.1| PREDICTED: UPF0496 protein At4g34320-like [Vitis vinifera]
          Length = 373

 Score =  144 bits (364), Expect = 6e-33
 Identities = 71/90 (78%), Positives = 80/90 (88%)
 Frame = +2

Query: 2   LSSYEDECRLDPELQSFDATLQDRTHRVINSLAAGVEVRALSIDSLKEVTGCLLDMNQEV 181
           LSSYE  CR+D +LQSFD TLQ RT  VIN+LA GVEVRALS +SLKEVT CLL+MNQEV
Sbjct: 28  LSSYEAACRVDTDLQSFDTTLQARTSHVINTLAVGVEVRALSFNSLKEVTECLLEMNQEV 87

Query: 182 VKIILDCKQDIWKNQELFELVEDYFENSLQ 271
           VK+IL+CK+DIWKNQELFELVE+YFENSLQ
Sbjct: 88  VKVILECKKDIWKNQELFELVEEYFENSLQ 117


>ref|XP_003537895.1| PREDICTED: UPF0496 protein At4g34320-like [Glycine max]
          Length = 374

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/90 (76%), Positives = 82/90 (91%)
 Frame = +2

Query: 2   LSSYEDECRLDPELQSFDATLQDRTHRVINSLAAGVEVRALSIDSLKEVTGCLLDMNQEV 181
           LSSYE  C+LD +LQSFD TLQ RT++VIN+LA GVEVRALS DSLK++T CLL+MNQEV
Sbjct: 27  LSSYEAACKLDSDLQSFDTTLQARTNQVINTLAVGVEVRALSFDSLKQITECLLEMNQEV 86

Query: 182 VKIILDCKQDIWKNQELFELVEDYFENSLQ 271
           VK+ILDCK+DIWK+QELFELVE+YFENSL+
Sbjct: 87  VKVILDCKKDIWKSQELFELVEEYFENSLK 116


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