BLASTX nr result

ID: Coptis25_contig00034297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034297
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527838.1| PREDICTED: carotenoid 9,10(9',10')-cleavage ...   195   3e-48
ref|XP_002516496.1| 9-cis-epoxycarotenoid dioxygenase, putative ...   195   3e-48
ref|XP_002308606.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-47
ref|XP_002324226.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45
ref|XP_002324224.1| predicted protein [Populus trichocarpa] gi|2...   184   5e-45

>ref|XP_003527838.1| PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase-like
           [Glycine max]
          Length = 669

 Score =  195 bits (496), Expect = 3e-48
 Identities = 90/132 (68%), Positives = 110/132 (83%)
 Frame = +1

Query: 1   GEGMLHALYFTKDTQDCWTMLYNNKYVKTESYMEEKRKNKPSFLPAIEGDSLAILAAFLL 180
           GEGMLHA+YF + +   WT+LYNNKYV+T++Y  EK+++KP FLPAIEGDS AIL+A+LL
Sbjct: 171 GEGMLHAIYFKRWSPGIWTVLYNNKYVETDTYKVEKQRSKPLFLPAIEGDSPAILSAYLL 230

Query: 181 NWLRFGKANKHFSNTNVFEHSGKCYSIAENHMPHEVDIVTLETLVGGWVLEKSWGRPFTS 360
           NWLRFGK NK+ SNTNVFEHSGK YS+AENH+P E+DI TL+TL   W +  +W RPFTS
Sbjct: 231 NWLRFGKVNKYISNTNVFEHSGKFYSVAENHIPQEIDIFTLKTL-RNWNVNGAWDRPFTS 289

Query: 361 HPKRAPGTGELV 396
           HPK+ PGTGELV
Sbjct: 290 HPKKVPGTGELV 301


>ref|XP_002516496.1| 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
           gi|223544316|gb|EEF45837.1| 9-cis-epoxycarotenoid
           dioxygenase, putative [Ricinus communis]
          Length = 577

 Score =  195 bits (496), Expect = 3e-48
 Identities = 91/133 (68%), Positives = 108/133 (81%)
 Frame = +1

Query: 1   GEGMLHALYFTKDTQDCWTMLYNNKYVKTESYMEEKRKNKPSFLPAIEGDSLAILAAFLL 180
           GEGMLH LYF K     WT+LYNN++V+TE++  EK +NKPSFLPAIEG+S AIL+AF L
Sbjct: 116 GEGMLHVLYFNKSIDGSWTVLYNNRHVETETFKLEKHRNKPSFLPAIEGNSAAILSAFFL 175

Query: 181 NWLRFGKANKHFSNTNVFEHSGKCYSIAENHMPHEVDIVTLETLVGGWVLEKSWGRPFTS 360
           N LRFGK NKH SNTNVFEH+G+ YS+AEN++P E+DI TL+TL G W +  SW RPFTS
Sbjct: 176 NLLRFGKINKHLSNTNVFEHAGRFYSVAENYIPQEIDIFTLKTL-GNWDVNGSWNRPFTS 234

Query: 361 HPKRAPGTGELVI 399
           HPKR PGTGELVI
Sbjct: 235 HPKRVPGTGELVI 247


>ref|XP_002308606.1| predicted protein [Populus trichocarpa] gi|222854582|gb|EEE92129.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score =  191 bits (485), Expect = 5e-47
 Identities = 91/133 (68%), Positives = 107/133 (80%)
 Frame = +1

Query: 1   GEGMLHALYFTKDTQDCWTMLYNNKYVKTESYMEEKRKNKPSFLPAIEGDSLAILAAFLL 180
           GEGMLH LYF K     WT+ Y NKYV++E++  EK++NKPSFLPAIEG S AIL+A+LL
Sbjct: 61  GEGMLHVLYFDKARDGSWTVTYKNKYVESETFKLEKQRNKPSFLPAIEGSSPAILSAYLL 120

Query: 181 NWLRFGKANKHFSNTNVFEHSGKCYSIAENHMPHEVDIVTLETLVGGWVLEKSWGRPFTS 360
           N LRFGK NK+ SNTNVFEHSGK YS+AENHMP E+++ TLETL G W +  +W RPFTS
Sbjct: 121 NLLRFGKVNKYLSNTNVFEHSGKYYSVAENHMPQEINMFTLETL-GNWDVNGAWDRPFTS 179

Query: 361 HPKRAPGTGELVI 399
           HPKRAP TGELVI
Sbjct: 180 HPKRAPDTGELVI 192


>ref|XP_002324226.1| predicted protein [Populus trichocarpa] gi|222865660|gb|EEF02791.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  185 bits (469), Expect = 4e-45
 Identities = 89/135 (65%), Positives = 109/135 (80%), Gaps = 2/135 (1%)
 Frame = +1

Query: 1   GEGMLHALYFTKDTQD--CWTMLYNNKYVKTESYMEEKRKNKPSFLPAIEGDSLAILAAF 174
           GEGMLHA+ F K++ D   WT+LYNN++V+TE+Y  EK+++KPSFLPAIEG   AIL ++
Sbjct: 90  GEGMLHAVCFDKESDDGETWTVLYNNRHVETETYKIEKQRDKPSFLPAIEGSPPAILLSY 149

Query: 175 LLNWLRFGKANKHFSNTNVFEHSGKCYSIAENHMPHEVDIVTLETLVGGWVLEKSWGRPF 354
           LLN LRFGK NK  SNTNVFEHSGK YSIAENH+P E+DI +L+TL G W +  +W RPF
Sbjct: 150 LLNMLRFGKVNKDLSNTNVFEHSGKFYSIAENHIPQEIDIFSLQTL-GDWDINGTWHRPF 208

Query: 355 TSHPKRAPGTGELVI 399
            SHPKRAPGTGELV+
Sbjct: 209 NSHPKRAPGTGELVV 223


>ref|XP_002324224.1| predicted protein [Populus trichocarpa] gi|222865658|gb|EEF02789.1|
           predicted protein [Populus trichocarpa]
          Length = 457

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/135 (65%), Positives = 109/135 (80%), Gaps = 2/135 (1%)
 Frame = +1

Query: 1   GEGMLHALYFTKDTQ--DCWTMLYNNKYVKTESYMEEKRKNKPSFLPAIEGDSLAILAAF 174
           GEGMLHA+ F K++   + WT+LYNN++V+TE+Y  EK+++KPSFLPAIEG   AIL A+
Sbjct: 61  GEGMLHAVCFDKESDGGETWTVLYNNRHVETETYKIEKQRDKPSFLPAIEGSPPAILLAY 120

Query: 175 LLNWLRFGKANKHFSNTNVFEHSGKCYSIAENHMPHEVDIVTLETLVGGWVLEKSWGRPF 354
           LLN LRFGK NK  SNTNVFEHSGK YSIAENH+P E+DI +L+TL G W +  +W RPF
Sbjct: 121 LLNMLRFGKVNKDLSNTNVFEHSGKFYSIAENHIPQEIDIFSLQTL-GDWDINGTWHRPF 179

Query: 355 TSHPKRAPGTGELVI 399
            SHPKRAPGTGELV+
Sbjct: 180 NSHPKRAPGTGELVV 194


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