BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034279
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34156.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat...    72   5e-11
emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]    72   5e-11
ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat...    69   5e-10
emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]    69   5e-10

>emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/69 (47%), Positives = 48/69 (69%)
 Frame = -3

Query: 207 EAVELLDKIVDNGYSVNHVSYLIVINGLCKARNVDASLRLLGAMEKHKVRPDVEMYNMII 28
           EA+ L DK++D G+  N V+Y  +INGLCK  N  A++RLL +ME+   +PDV +Y  II
Sbjct: 133 EALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSII 192

Query: 27  NGLCKENRV 1
           + LCK+ +V
Sbjct: 193 DSLCKDRQV 201


>ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/69 (47%), Positives = 48/69 (69%)
 Frame = -3

Query: 207 EAVELLDKIVDNGYSVNHVSYLIVINGLCKARNVDASLRLLGAMEKHKVRPDVEMYNMII 28
           EA+ L DK++D G+  N V+Y  +INGLCK  N  A++RLL +ME+   +PDV +Y  II
Sbjct: 144 EALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSII 203

Query: 27  NGLCKENRV 1
           + LCK+ +V
Sbjct: 204 DSLCKDRQV 212


>emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/69 (47%), Positives = 48/69 (69%)
 Frame = -3

Query: 207 EAVELLDKIVDNGYSVNHVSYLIVINGLCKARNVDASLRLLGAMEKHKVRPDVEMYNMII 28
           EA+ L DK++D G+  N V+Y  +INGLCK  N  A++RLL +ME+   +PDV +Y  II
Sbjct: 153 EALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSII 212

Query: 27  NGLCKENRV 1
           + LCK+ +V
Sbjct: 213 DSLCKDRQV 221



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 23/65 (35%), Positives = 46/65 (70%)
 Frame = -3

Query: 207 EAVELLDKIVDNGYSVNHVSYLIVINGLCKARNVDASLRLLGAMEKHKVRPDVEMYNMII 28
           +A+ L  ++V  G   + V+Y I+++ LCK R+++ ++ LL A+E   + PD+++YN+II
Sbjct: 398 DAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIII 457

Query: 27  NGLCK 13
           +G+C+
Sbjct: 458 DGMCR 462


>ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/69 (44%), Positives = 48/69 (69%)
 Frame = -3

Query: 207 EAVELLDKIVDNGYSVNHVSYLIVINGLCKARNVDASLRLLGAMEKHKVRPDVEMYNMII 28
           +A+ L DK++  G+  N V+Y  +INGLCK  N +A++RLL +ME+   +PDV +Y  II
Sbjct: 157 DALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSII 216

Query: 27  NGLCKENRV 1
           + LCK+ +V
Sbjct: 217 DSLCKDRQV 225


>emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/69 (44%), Positives = 48/69 (69%)
 Frame = -3

Query: 207 EAVELLDKIVDNGYSVNHVSYLIVINGLCKARNVDASLRLLGAMEKHKVRPDVEMYNMII 28
           +A+ L DK++  G+  N V+Y  +INGLCK  N +A++RLL +ME+   +PDV +Y  II
Sbjct: 155 DALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSII 214

Query: 27  NGLCKENRV 1
           + LCK+ +V
Sbjct: 215 DSLCKDRQV 223



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/69 (37%), Positives = 43/69 (62%)
 Frame = -3

Query: 207 EAVELLDKIVDNGYSVNHVSYLIVINGLCKARNVDASLRLLGAMEKHKVRPDVEMYNMII 28
           EAV++ D +V NGY+ N +SY  +ING CK + +D +  L   M + ++ P+   YN ++
Sbjct: 330 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM 389

Query: 27  NGLCKENRV 1
           +GLC   R+
Sbjct: 390 HGLCHVGRL 398