BLASTX nr result

ID: Coptis25_contig00034259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034259
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34467.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002270849.1| PREDICTED: uncharacterized protein KIAA1310 ...   149   2e-34
ref|XP_002297982.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34
ref|NP_001238165.1| uncharacterized protein LOC100527322 [Glycin...   141   5e-32
ref|XP_002868573.1| hypothetical protein ARALYDRAFT_493799 [Arab...   138   4e-31

>emb|CBI34467.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  149 bits (376), Expect = 2e-34
 Identities = 71/96 (73%), Positives = 83/96 (86%)
 Frame = -1

Query: 414 ICLGYPLKGMNGTIRDEILLQVTVPIMFVQGSKDNLCPLDKLAAVCKKMSSINELHVVDG 235
           +CLGYPLKGM+GTIRDE LLQ+ VPIMFVQGSKD LCPL+KL AV KKM S+NELHV++G
Sbjct: 105 VCLGYPLKGMSGTIRDETLLQLKVPIMFVQGSKDGLCPLEKLEAVRKKMKSLNELHVIEG 164

Query: 234 GDHSFKIAKKHLVVNGSTQEEAEDQVVKAIAGFLTK 127
           GDHSFKIAKKHL   G++Q EAED  V+AIA F++K
Sbjct: 165 GDHSFKIAKKHLNSEGTSQAEAEDHAVQAIAAFVSK 200


>ref|XP_002270849.1| PREDICTED: uncharacterized protein KIAA1310 homolog [Vitis
           vinifera]
          Length = 235

 Score =  149 bits (376), Expect = 2e-34
 Identities = 71/96 (73%), Positives = 83/96 (86%)
 Frame = -1

Query: 414 ICLGYPLKGMNGTIRDEILLQVTVPIMFVQGSKDNLCPLDKLAAVCKKMSSINELHVVDG 235
           +CLGYPLKGM+GTIRDE LLQ+ VPIMFVQGSKD LCPL+KL AV KKM S+NELHV++G
Sbjct: 135 VCLGYPLKGMSGTIRDETLLQLKVPIMFVQGSKDGLCPLEKLEAVRKKMKSLNELHVIEG 194

Query: 234 GDHSFKIAKKHLVVNGSTQEEAEDQVVKAIAGFLTK 127
           GDHSFKIAKKHL   G++Q EAED  V+AIA F++K
Sbjct: 195 GDHSFKIAKKHLNSEGTSQAEAEDHAVQAIAAFVSK 230


>ref|XP_002297982.1| predicted protein [Populus trichocarpa] gi|222845240|gb|EEE82787.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  147 bits (371), Expect = 9e-34
 Identities = 66/96 (68%), Positives = 81/96 (84%)
 Frame = -1

Query: 414 ICLGYPLKGMNGTIRDEILLQVTVPIMFVQGSKDNLCPLDKLAAVCKKMSSINELHVVDG 235
           ICLGYPLK M G +RDE LLQ+TVP+MFVQGSKD LCPL+KL AVCKKM S NELHV++G
Sbjct: 128 ICLGYPLKAMGGAVRDETLLQLTVPVMFVQGSKDGLCPLEKLEAVCKKMKSHNELHVING 187

Query: 234 GDHSFKIAKKHLVVNGSTQEEAEDQVVKAIAGFLTK 127
           GDHSFKI KKHL + GSTQ++AED  V+ ++ F+++
Sbjct: 188 GDHSFKIGKKHLQIKGSTQDQAEDLAVQGVSSFVSR 223


>ref|NP_001238165.1| uncharacterized protein LOC100527322 [Glycine max]
           gi|255632085|gb|ACU16395.1| unknown [Glycine max]
          Length = 225

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/96 (68%), Positives = 76/96 (79%)
 Frame = -1

Query: 414 ICLGYPLKGMNGTIRDEILLQVTVPIMFVQGSKDNLCPLDKLAAVCKKMSSINELHVVDG 235
           +CLGYPLKG NG +RDE LLQ+TVP MFVQGSKD LCPL+KL    KKM + NELHV+DG
Sbjct: 126 VCLGYPLKGSNGAVRDETLLQLTVPTMFVQGSKDGLCPLEKLETTRKKMKAPNELHVIDG 185

Query: 234 GDHSFKIAKKHLVVNGSTQEEAEDQVVKAIAGFLTK 127
           GDHSFKI KKHL  N STQ+E ED  V AIA F+++
Sbjct: 186 GDHSFKIGKKHLQANNSTQDEVEDVAVLAIAAFISR 221


>ref|XP_002868573.1| hypothetical protein ARALYDRAFT_493799 [Arabidopsis lyrata subsp.
           lyrata] gi|297314409|gb|EFH44832.1| hypothetical protein
           ARALYDRAFT_493799 [Arabidopsis lyrata subsp. lyrata]
          Length = 229

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/96 (65%), Positives = 76/96 (79%)
 Frame = -1

Query: 414 ICLGYPLKGMNGTIRDEILLQVTVPIMFVQGSKDNLCPLDKLAAVCKKMSSINELHVVDG 235
           ICLGYPLKG  G IRDE LL++ VP+MFVQGSKD +CPLDKL AVC KM ++ E+HV+DG
Sbjct: 128 ICLGYPLKGAKGVIRDETLLEMGVPVMFVQGSKDPMCPLDKLEAVCNKMKAVTEIHVIDG 187

Query: 234 GDHSFKIAKKHLVVNGSTQEEAEDQVVKAIAGFLTK 127
           GDHSFKI KKHL     TQ+E ED  +KAI+ F++K
Sbjct: 188 GDHSFKIGKKHLETKELTQDEVEDVALKAISAFVSK 223


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