BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034249
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   127   3e-27
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   121   2e-25
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...   120   4e-25
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   109   1e-21

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  127 bits (320), Expect = 3e-27
 Identities = 88/300 (29%), Positives = 136/300 (45%), Gaps = 10/300 (3%)
 Frame = -2

Query: 895  EDNIWVDWTWKQHIKEIFF*LMSIPQDYSWTLRSILNTRKAAKKFIRYSISNGKDTLL*H 716
            + +IW  W     ++   F  +  PQ+ SW    IL  R  A   ++Y I +G  T L  
Sbjct: 186  DGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWF 245

Query: 715  DIWCSRSPLIEDAEAKSEWNFPM--NSKVSVLISQGIWNTAVT---GLHSQSLKEEITAV 551
            D W   SPL +    +  ++  M  N+KV+VLI    W T  T   G H   + E I + 
Sbjct: 246  DNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHP--IIEAIPSN 303

Query: 550  EINKHLTDDKIIWTPHQSSHYTSNSAYIALSQPRAKTKWHRMVWGRWVLPRHGFTTWQLF 371
               K    D+++W    +  ++   A+  L + R   +WH +VW +  +PRH F  W   
Sbjct: 304  SNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAV 363

Query: 370  SNNIPTQDRLVQKKILNQSACGLCQNSREYSLHIFFECNYSKEIFSRVKTLLGINIDSSN 191
               + TQD+L +  I   + C LC  + E   H+FFEC+Y+K I+  V        D   
Sbjct: 364  QQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDVCD----RCDIPR 419

Query: 190  ANREWSTIIRLCNRDDMREIYKVFVC-----ATVDYIWKERNARKFRQTARPALVVFNKM 26
              + W   IR        + +  F C     ATV ++W+ERNAR F   +R   +V N++
Sbjct: 420  MTKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYHVWQERNARIFAGMSRTPNLVLNQI 479


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score =  125 bits (314), Expect = 1e-26
 Identities = 86/282 (30%), Positives = 132/282 (46%), Gaps = 10/282 (3%)
 Frame = -2

Query: 841 F*LMSIPQDYSWTLRSILNTRKAAKKFIRYSISNGKDTLL*HDIWCSRSPLIEDAEAKSE 662
           F  +  PQ+ SW    IL  R  A   ++Y I +G  T L  D W   SPL +    +  
Sbjct: 22  FWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFI 81

Query: 661 WNFPM--NSKVSVLISQGIWNTAVT---GLHSQSLKEEITAVEINKHLTDDKIIWTPHQS 497
           ++  M  N+KV+VLI    W T  T   G H   + E I +    K    D+I+W    +
Sbjct: 82  YDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHP--IIEAIPSNSNPKMGQKDEIVWLDSPN 139

Query: 496 SHYTSNSAYIALSQPRAKTKWHRMVWGRWVLPRHGFTTWQLFSNNIPTQDRLVQKKILNQ 317
             ++   A+  L + R   +WH +VW +  +PRH F  W +    + TQD+L +  I   
Sbjct: 140 HRFSVKVAWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGP 199

Query: 316 SACGLCQNSREYSLHIFFECNYSKEIFSRVKTLLGINIDSSNANREWSTIIRLC-----N 152
           + C LC  + E   H+FFEC+Y+K I+  V        D     + W   IR        
Sbjct: 200 NRCSLCLRNNEDHNHLFFECSYTKAIWWDVCD----RCDIPRMTKGWDEWIRWATVSWHG 255

Query: 151 RDDMREIYKVFVCATVDYIWKERNARKFRQTARPALVVFNKM 26
           +  +    K+   ATV ++W+ERNAR F   +R + +VFN++
Sbjct: 256 KSFVNFSRKLSFAATVYHVWQERNARIFAGLSRTSNLVFNQI 297


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  121 bits (304), Expect = 2e-25
 Identities = 85/282 (30%), Positives = 128/282 (45%), Gaps = 10/282 (3%)
 Frame = -2

Query: 841  F*LMSIPQDYSWTLRSILNTRKAAKKFIRYSISNGKDTLL*HDIWCSRSPLIEDAEAKSE 662
            F  +  PQ+ SW    IL  R  A   ++Y I +G  T L  D W   SPL +    +  
Sbjct: 1077 FWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFI 1136

Query: 661  WNFPM--NSKVSVLISQGIWNTAVT---GLHSQSLKEEITAVEINKHLTDDKIIWTPHQS 497
            ++  M  N+KV+VLI    W T  T   G H   + E I +    K    D+I+W    +
Sbjct: 1137 YDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHP--IIEAIPSNSNPKMGQKDEIVWLDSPN 1194

Query: 496  SHYTSNSAYIALSQPRAKTKWHRMVWGRWVLPRHGFTTWQLFSNNIPTQDRLVQKKILNQ 317
              +    A+  L + R   +WH +VW +  +PRH F  W      + TQD+L +  I   
Sbjct: 1195 HRFLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGP 1254

Query: 316  SACGLCQNSREYSLHIFFECNYSKEIFSRVKTLLGINIDSSNANREWSTIIRLC-----N 152
            + C LC  + E   H+FFEC+Y+K I+  V        D     + W   IR        
Sbjct: 1255 NRCSLCLRNNEDHNHLFFECSYTKAIWWDVCD----RCDIPRMTKGWDEWIRWATVSWHG 1310

Query: 151  RDDMREIYKVFVCATVDYIWKERNARKFRQTARPALVVFNKM 26
            +  +    K+   ATV ++W+ERNAR F   +R   +V N++
Sbjct: 1311 KSFVNFSRKLSFAATVYHVWQERNARIFAGMSRTPNLVLNQI 1352


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score =  120 bits (301), Expect = 4e-25
 Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 10/282 (3%)
 Frame = -2

Query: 841  F*LMSIPQDYSWTLRSILNTRKAAKKFIRYSISNGKDTLL*HDIWCSRSPLIEDAEAKSE 662
            F  +  PQ+ S     IL  R  A   ++Y I +G  T L  D W   SPL +    +  
Sbjct: 737  FWTIKTPQNCSSAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFI 796

Query: 661  WNFPM--NSKVSVLISQGIWNTAVT---GLHSQSLKEEITAVEINKHLTDDKIIWTPHQS 497
            ++  M  N+KV+VLI    W T  T   G H   + E I +    K    D+IIW    +
Sbjct: 797  YDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHP--IIEAIPSNSNPKMGQKDEIIWLDSPN 854

Query: 496  SHYTSNSAYIALSQPRAKTKWHRMVWGRWVLPRHGFTTWQLFSNNIPTQDRLVQKKILNQ 317
              ++   A+  L + R   +WH +VW +  +PRH F  W +    + TQD+L +  I   
Sbjct: 855  HRFSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGP 914

Query: 316  SACGLCQNSREYSLHIFFECNYSKEIFSRVKTLLGINIDSSNANREWSTIIRLC-----N 152
            + C LC  + E   H+FFEC+Y+K I+  V        D     + W   IR        
Sbjct: 915  NRCSLCLRNNEDHNHLFFECSYTKAIWWDVCD----RCDIPRMTKGWDEWIRWATVSWHG 970

Query: 151  RDDMREIYKVFVCATVDYIWKERNARKFRQTARPALVVFNKM 26
            +  +    K+   ATV ++W+ERNAR F   +R + +VFN++
Sbjct: 971  KSFINFSRKLSFAATVYHVWQERNARIFAGLSRTSNLVFNQI 1012


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  109 bits (272), Expect = 1e-21
 Identities = 72/319 (22%), Positives = 145/319 (45%), Gaps = 14/319 (4%)
 Frame = -2

Query: 916  IFKLITREDNIWVDWTWKQHIK-EIFF*LMSIPQDYSWTLRSILNTRKAAKKFIRYSISN 740
            I++L++ +D++WV WT    +K E F+ + +     SW  R +L  R+ AK F +  ++N
Sbjct: 612  IWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIEVNN 671

Query: 739  GKDTLL*HDIWCSRSPLIEDAEAKSEWNFPMNSKVSVLISQGIWNTAVTGLHSQSLKEEI 560
            G +T    D W  + PLI    A+   +  ++  +++  +   W+      H   +  E 
Sbjct: 672  GVNTSFWFDNWSEKGPLINLTGARGAIDMGISRHMTLAEA---WSRRRRKRHRVEILNEF 728

Query: 559  TAVEINKHL-----TDDKIIWTPHQS---SHYTSNSAYIALSQPRAKTKWHRMVWGRWVL 404
              + + K+       +D I+W   +    + +++   +  +     +  WH+ VW     
Sbjct: 729  EEILLQKYQHRNIELEDAILWRGKEDVFKARFSTKDTWNHIRTSSNQRAWHKGVWFAHAT 788

Query: 403  PRHGFTTWQLFSNNIPTQDRLVQKKILNQSACGLCQNSREYSLHIFFECNYSKEIFSRVK 224
            P+  F  W    N + T DR++       + C  C +  E   H+FF+C YS EI+    
Sbjct: 789  PKFSFCAWLAIRNRLSTGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQCCYSSEIW---- 844

Query: 223  TLLGINIDSSNANREWSTIIRLCNRDDMREIYKVFVC-----ATVDYIWKERNARKFRQT 59
            T +  N+     + +WS ++   + D   +  + F+       ++  IW+ERN+R+  + 
Sbjct: 845  TSIAKNVYKDRFSTKWSAVVNYIS-DSQPDRIQSFLSRYTFQVSIHSIWRERNSRRHGEK 903

Query: 58   ARPALVVFNKMLRDLRTYL 2
            +R A  +  ++ + +R  L
Sbjct: 904  SRSASNLIRQIDKTIRNQL 922