BLASTX nr result

ID: Coptis25_contig00034248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034248
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324677.1| auxin efflux carrier component [Populus tric...   219   3e-55
ref|XP_002527704.1| Auxin efflux carrier component, putative [Ri...   208   4e-52
ref|XP_002266059.1| PREDICTED: auxin efflux carrier component 2 ...   204   8e-51
emb|CAN70111.1| hypothetical protein VITISV_032889 [Vitis vinifera]   201   7e-50
ref|NP_001238365.1| auxin efflux carrier protein 4 [Glycine max]...   200   1e-49

>ref|XP_002324677.1| auxin efflux carrier component [Populus trichocarpa]
           gi|222866111|gb|EEF03242.1| auxin efflux carrier
           component [Populus trichocarpa]
          Length = 633

 Score =  219 bits (557), Expect = 3e-55
 Identities = 118/190 (62%), Positives = 129/190 (67%), Gaps = 3/190 (1%)
 Frame = +2

Query: 2   MSLNGREPLETNAEIGDDGKLHXXXXXXXXXXXXXXYNKSHGLNSITSMTPRASNLTGVE 181
           +SLNGREPL+ +AEIGDDGKLH              +NKSHGLNSITSMTPRASNLTGVE
Sbjct: 182 VSLNGREPLQADAEIGDDGKLHVVVKRSNASSIVSSFNKSHGLNSITSMTPRASNLTGVE 241

Query: 182 IYSIQSSREPTPRASSFNQSDFYAMFSSKMPSPKHGYTNNNFQGGGADVYSLQSSKGVTP 361
           IYS+QSSREPTPRASSFNQ+DFYAMF+SK  SPKHGYT N+FQGG  DVYSLQSSKG TP
Sbjct: 242 IYSVQSSREPTPRASSFNQTDFYAMFASKAASPKHGYT-NSFQGGIGDVYSLQSSKGATP 300

Query: 362 RTSNLEDXXXXXXXXXXXXXXXXXXXN-GTLSSSYPPPNPMF--XXXXXXXXXXXXXXXY 532
           RTSN ++                   N G+L SSYPPPNPMF                  
Sbjct: 301 RTSNYDEEMLKLGKKKGRTNMSGELFNGGSLVSSYPPPNPMFSGSTSGGPKKKESGSGAM 360

Query: 533 PNKELHMFVW 562
           PNKELHMFVW
Sbjct: 361 PNKELHMFVW 370


>ref|XP_002527704.1| Auxin efflux carrier component, putative [Ricinus communis]
           gi|223532935|gb|EEF34703.1| Auxin efflux carrier
           component, putative [Ricinus communis]
          Length = 636

 Score =  208 bits (530), Expect = 4e-52
 Identities = 113/190 (59%), Positives = 125/190 (65%), Gaps = 3/190 (1%)
 Frame = +2

Query: 2   MSLNGREPLETNAEIGDDGKLHXXXXXXXXXXXXXXYNKSHGLNSITSMTPRASNLTGVE 181
           +SLNGREPL+ +AEIGDDGKLH              +NKS GLNSITSMTPRASNLTGVE
Sbjct: 182 VSLNGREPLQADAEIGDDGKLHVVVKRSTASSMVSSFNKSQGLNSITSMTPRASNLTGVE 241

Query: 182 IYSIQSSREPTPRASSFNQSDFYAMFSSKMPSPKHGYTNNNFQGGG-ADVYSLQSSKGVT 358
           IYS+QSSREPTPRASSFNQ+DFYAMF+SK  SPKHGYT N+FQG G  DVYSLQSSKG T
Sbjct: 242 IYSVQSSREPTPRASSFNQTDFYAMFASKAASPKHGYT-NSFQGSGIGDVYSLQSSKGAT 300

Query: 359 PRTSNLEDXXXXXXXXXXXXXXXXXXXNGTLSSSYPPPNPMFXXXXXXXXXXXXXXXY-- 532
           PRTSN ++                   +G L + YPPPNPMF                  
Sbjct: 301 PRTSNFDEEMMLKINNNNGKKRGGRSMSGELFNGYPPPNPMFSGSTSGGMRKKESGGTMP 360

Query: 533 PNKELHMFVW 562
            NKELHMFVW
Sbjct: 361 NNKELHMFVW 370


>ref|XP_002266059.1| PREDICTED: auxin efflux carrier component 2 isoform 1 [Vitis
           vinifera]
          Length = 630

 Score =  204 bits (519), Expect = 8e-51
 Identities = 115/191 (60%), Positives = 123/191 (64%), Gaps = 4/191 (2%)
 Frame = +2

Query: 2   MSLNGREPLETNAEIGDDGKLHXXXXXXXXXXXXXX-YNKSHGLNSITSMTPRASNLTGV 178
           MSLNGREPLET+AEIGDDGKLH               Y KSHGLNSI S+TPRASNLTGV
Sbjct: 182 MSLNGREPLETDAEIGDDGKLHVVVRRSSSSSVISSAYKKSHGLNSI-SITPRASNLTGV 240

Query: 179 EIYSIQSSREPTPRASSFNQSDFYAMFSSKMPSPKHGYTNNNFQGGGADVYSLQSSKGVT 358
           EIYSIQSSREPTPRASSFNQ+DFYAMF+SK  SP+HG       GGGADV+SLQSSKG T
Sbjct: 241 EIYSIQSSREPTPRASSFNQTDFYAMFASKTASPRHGSIGGVGAGGGADVFSLQSSKGPT 300

Query: 359 PRTSNLEDXXXXXXXXXXXXXXXXXXXNGTLSSSYPPPNPMF---XXXXXXXXXXXXXXX 529
           PRTSN E+                   +G L SSYPPPNPMF                  
Sbjct: 301 PRTSNFEEEMLKVGKKRGGRSMSGELFHGGLLSSYPPPNPMFSGSTSGGPKKKESGGGGA 360

Query: 530 YPNKELHMFVW 562
            PNKELHMFVW
Sbjct: 361 MPNKELHMFVW 371


>emb|CAN70111.1| hypothetical protein VITISV_032889 [Vitis vinifera]
          Length = 573

 Score =  201 bits (511), Expect = 7e-50
 Identities = 114/191 (59%), Positives = 122/191 (63%), Gaps = 4/191 (2%)
 Frame = +2

Query: 2   MSLNGREPLETNAEIGDDGKLHXXXXXXXXXXXXXX-YNKSHGLNSITSMTPRASNLTGV 178
           MSLNGREPLET+AEIGDDGKLH               Y KSHGLNSI S+TPRASNLTGV
Sbjct: 182 MSLNGREPLETDAEIGDDGKLHVVVRRSSSSSVISSAYKKSHGLNSI-SITPRASNLTGV 240

Query: 179 EIYSIQSSREPTPRASSFNQSDFYAMFSSKMPSPKHGYTNNNFQGGGADVYSLQSSKGVT 358
           EIYSIQSSREPTPRASSFNQ+DFYAMF+SK  SP+HG       GGGADV+SLQSSKG T
Sbjct: 241 EIYSIQSSREPTPRASSFNQTDFYAMFASKTASPRHGSIGGVGAGGGADVFSLQSSKGPT 300

Query: 359 PRTSNLEDXXXXXXXXXXXXXXXXXXXNGTLSSSYPPPNPMF---XXXXXXXXXXXXXXX 529
           PRTSN E+                   +G L SSYP PNPMF                  
Sbjct: 301 PRTSNFEEEMLKVGKKRGGRSMSGELFHGGLLSSYPTPNPMFSGSTSGGPKKKESGGGGA 360

Query: 530 YPNKELHMFVW 562
            PNKELHMFVW
Sbjct: 361 MPNKELHMFVW 371


>ref|NP_001238365.1| auxin efflux carrier protein 4 [Glycine max]
           gi|222142551|gb|ACM45962.1| auxin efflux carrier protein
           4 [Glycine max]
          Length = 626

 Score =  200 bits (509), Expect = 1e-49
 Identities = 112/197 (56%), Positives = 125/197 (63%), Gaps = 10/197 (5%)
 Frame = +2

Query: 2   MSLNGREPLETNAEIGDDGKLHXXXXXXXXXXXXXXYNKSHGLNSITSMTPRASNLTGVE 181
           +SLNGREPL+T+AEIG+DGKLH              +NKSH    +TSMTPRASNLTGVE
Sbjct: 182 VSLNGREPLQTDAEIGEDGKLHVVVKRSAASSMISSFNKSH----LTSMTPRASNLTGVE 237

Query: 182 IYSIQSSREPTPRASSFNQSDFYAMFSSKMPSPKHGYTNN--NFQGGGADVYSLQSSKGV 355
           IYS+QSSREPTPR SSFNQ+DFYAMF+SK PSPKHGYTN+  +  GG  DVYSLQSSKG 
Sbjct: 238 IYSVQSSREPTPRGSSFNQTDFYAMFASKAPSPKHGYTNSFQSNNGGIGDVYSLQSSKGA 297

Query: 356 TPRTSNLEDXXXXXXXXXXXXXXXXXXXNGTL-SSSYPPPNPMF-------XXXXXXXXX 511
           TPRTSN E+                   NG L SS+YPPPNPMF                
Sbjct: 298 TPRTSNFEEEMLKMHKKRGGRSMSGELFNGGLVSSNYPPPNPMFSGSTSAAGGPKKKDSS 357

Query: 512 XXXXXXYPNKELHMFVW 562
                  PNKELHMFVW
Sbjct: 358 GGGGAVAPNKELHMFVW 374


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