BLASTX nr result

ID: Coptis25_contig00034241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034241
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83033.1| hypothetical protein VITISV_019860 [Vitis vinifera]   116   2e-24
emb|CBI23051.3| unnamed protein product [Vitis vinifera]              114   1e-23
emb|CAN62175.1| hypothetical protein VITISV_001516 [Vitis vinifera]   113   2e-23
ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
emb|CAN67323.1| hypothetical protein VITISV_004159 [Vitis vinifera]   111   7e-23

>emb|CAN83033.1| hypothetical protein VITISV_019860 [Vitis vinifera]
          Length = 418

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/82 (69%), Positives = 65/82 (79%)
 Frame = +3

Query: 3   ARGPVLDNVDISSRKQLLSFALIHCDEESIGELLRAWKDLDIQSQCESLAMLTGTNPPNF 182
           ARGP  +N+DI+ RKQLL FAL HCDEESIGELL AWKDLD Q QCE+L MLTGTNPPNF
Sbjct: 292 ARGPTFENIDINPRKQLLGFALSHCDEESIGELLHAWKDLDTQGQCETLMMLTGTNPPNF 351

Query: 183 SAQGSFIISLPSIVNNTDSLNM 248
           S Q S +ISLP + N  D +N+
Sbjct: 352 SIQVSSVISLP-VHNIQDIVNL 372


>emb|CBI23051.3| unnamed protein product [Vitis vinifera]
          Length = 2325

 Score =  114 bits (284), Expect = 1e-23
 Identities = 62/110 (56%), Positives = 74/110 (67%), Gaps = 5/110 (4%)
 Frame = +3

Query: 3    ARGPVLDNVDISSRKQLLSFALIHCDEESIGELLRAWKDLDIQSQCESLAMLTGTNPPNF 182
            ARGP L+N+DI+SRKQLL FAL HCDEESIGELL AWKDLD Q QCE+L M TGTNPPNF
Sbjct: 1266 ARGPALENMDINSRKQLLGFALSHCDEESIGELLHAWKDLDTQGQCETLMMSTGTNPPNF 1325

Query: 183  SAQGSFIISLPSIVNNTDSLNMI-----CLPYGALPMQWLDAVEAKLKQG 317
            S Q      LP + N TD  +++      L + AL + WL  +  K + G
Sbjct: 1326 SIQ-----DLP-LENGTDWESLLRENGKILSFAALQLPWLLELSRKTEHG 1369


>emb|CAN62175.1| hypothetical protein VITISV_001516 [Vitis vinifera]
          Length = 1989

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/71 (76%), Positives = 59/71 (83%)
 Frame = +3

Query: 3    ARGPVLDNVDISSRKQLLSFALIHCDEESIGELLRAWKDLDIQSQCESLAMLTGTNPPNF 182
            ARGP L+N+DI+ RKQLL FAL HCDEESIGELL AWKDLD Q QCE+L M TGTNP NF
Sbjct: 1112 ARGPALENMDINPRKQLLGFALSHCDEESIGELLHAWKDLDTQGQCETLMMSTGTNPLNF 1171

Query: 183  SAQGSFIISLP 215
            S QGS +ISLP
Sbjct: 1172 SIQGSSVISLP 1182


>ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|222868975|gb|EEF06106.1|
            predicted protein [Populus trichocarpa]
          Length = 2421

 Score =  111 bits (278), Expect = 5e-23
 Identities = 53/72 (73%), Positives = 61/72 (84%)
 Frame = +3

Query: 3    ARGPVLDNVDISSRKQLLSFALIHCDEESIGELLRAWKDLDIQSQCESLAMLTGTNPPNF 182
            ARGP L+N+DI SRKQLL FAL HCDEESIGELL AWKDLD+Q QCE+L++LTGT P +F
Sbjct: 1177 ARGPALENIDIGSRKQLLGFALSHCDEESIGELLHAWKDLDMQGQCENLSILTGTIPSSF 1236

Query: 183  SAQGSFIISLPS 218
            S QGS I SLP+
Sbjct: 1237 SDQGSSITSLPA 1248


>emb|CAN67323.1| hypothetical protein VITISV_004159 [Vitis vinifera]
          Length = 497

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/71 (74%), Positives = 58/71 (81%)
 Frame = +3

Query: 3   ARGPVLDNVDISSRKQLLSFALIHCDEESIGELLRAWKDLDIQSQCESLAMLTGTNPPNF 182
           ARGP L+N+DI+ RKQLL FAL HCDEES GELL AWKDLD Q QCE+L M TGTNP NF
Sbjct: 236 ARGPALENMDINPRKQLLGFALSHCDEESTGELLHAWKDLDTQGQCETLMMSTGTNPLNF 295

Query: 183 SAQGSFIISLP 215
           S QGS +ISLP
Sbjct: 296 SIQGSSVISLP 306


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