BLASTX nr result

ID: Coptis25_contig00034240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034240
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298122.1| predicted protein [Populus trichocarpa] gi|2...    43   5e-09
ref|XP_002517549.1| conserved hypothetical protein [Ricinus comm...    42   6e-08
gb|EAY72755.1| hypothetical protein OsI_00621 [Oryza sativa Indi...    45   3e-07
ref|NP_001172202.1| Os01g0176800 [Oryza sativa Japonica Group] g...    45   3e-07
gb|EEE53972.1| hypothetical protein OsJ_00590 [Oryza sativa Japo...    45   3e-07

>ref|XP_002298122.1| predicted protein [Populus trichocarpa] gi|222845380|gb|EEE82927.1|
            predicted protein [Populus trichocarpa]
          Length = 1063

 Score = 43.1 bits (100), Expect(2) = 5e-09
 Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
 Frame = +2

Query: 209  SYSITLWLIHKIWNSRIGL----PKFIRQASCDKKVLLFISALHMTGFLFVLILKIENAN 376
            ++ +TL L  K+W SRI L    P+   +   +K V L  S +H+ G++ VLI+     +
Sbjct: 826  AFLVTLRLCQKVWKSRIRLLSRSPREPHRVPSEKWVFLTTSTIHVIGYVIVLIIHSAKTS 885

Query: 377  DWQLESEECAWKTDEPHKMWRWMVELKAYM 466
               ++  E    +   H +  W  +L+ Y+
Sbjct: 886  QISVQMVEYLDSSGRSHTIREWETKLEEYV 915



 Score = 42.0 bits (97), Expect(2) = 5e-09
 Identities = 21/46 (45%), Positives = 30/46 (65%)
 Frame = +1

Query: 16  PSLYIVMLGIQTFTFSLPLIMGTEFLFDWKATQFCRAPSFGLEKLQ 153
           P + +VMLG+Q   +SLPLI G E LF  K+++   + S+ LEK Q
Sbjct: 765 PFMSLVMLGVQALGYSLPLITGAEALFKRKSSESYESSSYYLEKNQ 810


>ref|XP_002517549.1| conserved hypothetical protein [Ricinus communis]
           gi|223543181|gb|EEF44713.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 876

 Score = 42.4 bits (98), Expect(2) = 6e-08
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
 Frame = +2

Query: 209 SYSITLWLIHKIWNSRIGL----PKFIRQASCDKKVLLFISALHMTGFLFVLILKIENAN 376
           S+ +TL L  K+W SRI L    P    +   DK+V L    LH+ G+L VL++      
Sbjct: 639 SFLLTLRLCQKVWKSRIRLLTRSPHEPHRVPSDKQVFLATLVLHVVGYLIVLVIHAIKTI 698

Query: 377 DWQLESEECAWKTDEPHKMWRWMVELKAYM 466
              L+ E           +  W  EL+ Y+
Sbjct: 699 QKPLKMEISVDSDGNSRTLREWETELEEYV 728



 Score = 39.3 bits (90), Expect(2) = 6e-08
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = +1

Query: 16  PSLYIVMLGIQTFTFSLPLIMGTEFLFDWKATQFCRAPSFGLEKLQ 153
           P + +VMLG+Q   +SLPLI G E LF   +++     S+ LEK Q
Sbjct: 578 PFISLVMLGVQALGYSLPLITGAEALFKRMSSEPYETSSYDLEKNQ 623


>gb|EAY72755.1| hypothetical protein OsI_00621 [Oryza sativa Indica Group]
          Length = 1093

 Score = 45.1 bits (105), Expect(2) = 3e-07
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
 Frame = +2

Query: 203  LPSYSITLWLIHKIWNSRIGL----PKFIRQASCDKKVLLFISALHMTGFLFVLILKIEN 370
            L ++ +TL L+ K+W SRI L    P    +   DKKVL++ S  H+ GF  VL     +
Sbjct: 849  LAAFLLTLRLVQKVWRSRIRLLTRSPLEPGRVPSDKKVLVYTSGAHLVGFAVVLAAHYVS 908

Query: 371  ANDWQLESEECAWKT-DEPHKMWRWMVELKAYM 466
                 + SE        E H +  W V L+ Y+
Sbjct: 909  VLARPVRSEASYMDARGEAHALREWAVTLEEYI 941



 Score = 33.9 bits (76), Expect(2) = 3e-07
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
 Frame = +1

Query: 16  PSLYIVMLGIQTFTFSLPLIMGTEFLF--------DWKATQFCRAPSFGLEKLQRY 159
           P + +VMLG+Q   +S+PLI G E LF        D  AT     PS+ ++K Q Y
Sbjct: 785 PYVSVVMLGVQAVGYSVPLITGAEALFARIAASSGDGGATP---PPSYEVDKSQLY 837


>ref|NP_001172202.1| Os01g0176800 [Oryza sativa Japonica Group]
            gi|55295947|dbj|BAD67815.1| hypothetical protein [Oryza
            sativa Japonica Group] gi|255672929|dbj|BAH90932.1|
            Os01g0176800 [Oryza sativa Japonica Group]
          Length = 1093

 Score = 45.1 bits (105), Expect(2) = 3e-07
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
 Frame = +2

Query: 203  LPSYSITLWLIHKIWNSRIGL----PKFIRQASCDKKVLLFISALHMTGFLFVLILKIEN 370
            L ++ +TL L+ K+W SRI L    P    +   DKKVL++ S  H+ GF  VL     +
Sbjct: 849  LAAFLLTLRLVQKVWRSRIRLLTRSPLEPGRVPSDKKVLVYTSGAHLVGFAVVLAAHYVS 908

Query: 371  ANDWQLESEECAWKT-DEPHKMWRWMVELKAYM 466
                 + SE        E H +  W V L+ Y+
Sbjct: 909  VLARPVRSEASYMDARGEAHALREWAVTLEEYI 941



 Score = 33.9 bits (76), Expect(2) = 3e-07
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
 Frame = +1

Query: 16  PSLYIVMLGIQTFTFSLPLIMGTEFLF--------DWKATQFCRAPSFGLEKLQRY 159
           P + +VMLG+Q   +S+PLI G E LF        D  AT     PS+ ++K Q Y
Sbjct: 785 PYVSVVMLGVQAVGYSVPLITGAEALFARIAASSGDGGATP---PPSYEVDKSQLY 837


>gb|EEE53972.1| hypothetical protein OsJ_00590 [Oryza sativa Japonica Group]
          Length = 1090

 Score = 45.1 bits (105), Expect(2) = 3e-07
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
 Frame = +2

Query: 203  LPSYSITLWLIHKIWNSRIGL----PKFIRQASCDKKVLLFISALHMTGFLFVLILKIEN 370
            L ++ +TL L+ K+W SRI L    P    +   DKKVL++ S  H+ GF  VL     +
Sbjct: 846  LAAFLLTLRLVQKVWRSRIRLLTRSPLEPGRVPSDKKVLVYTSGAHLVGFAVVLAAHYVS 905

Query: 371  ANDWQLESEECAWKT-DEPHKMWRWMVELKAYM 466
                 + SE        E H +  W V L+ Y+
Sbjct: 906  VLARPVRSEASYMDARGEAHALREWAVTLEEYI 938



 Score = 33.9 bits (76), Expect(2) = 3e-07
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
 Frame = +1

Query: 16  PSLYIVMLGIQTFTFSLPLIMGTEFLF--------DWKATQFCRAPSFGLEKLQRY 159
           P + +VMLG+Q   +S+PLI G E LF        D  AT     PS+ ++K Q Y
Sbjct: 782 PYVSVVMLGVQAVGYSVPLITGAEALFARIAASSGDGGATP---PPSYEVDKSQLY 834


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