BLASTX nr result

ID: Coptis25_contig00034231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034231
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like...   312   3e-83
emb|CBI39502.3| unnamed protein product [Vitis vinifera]              312   3e-83
ref|XP_003555610.1| PREDICTED: ATP-dependent DNA helicase Q-like...   301   6e-80
ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi...   299   2e-79
ref|XP_004167539.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   295   3e-78

>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis
           vinifera]
          Length = 893

 Score =  312 bits (799), Expect = 3e-83
 Identities = 153/180 (85%), Positives = 164/180 (91%)
 Frame = -3

Query: 542 DIGVHWECRVKNLLQKHFGFSCLKTFQKEALEAWLANEDCLVLAATGSGKSLCFQIPALL 363
           +IG  W  RV +LL KHFG   LK+FQKEAL AWLA++DCLVLAATGSGKSLCFQIPALL
Sbjct: 153 EIGKDWVQRVNSLLHKHFGILSLKSFQKEALSAWLAHQDCLVLAATGSGKSLCFQIPALL 212

Query: 362 TGKVVVVISPLISLMHDQCLKLATHGVSACFLGSGQTDNSVEHKAMSGAYGVIYVCPETV 183
           TGKVVVVISPLISLMHDQCLKLA HGVSACFLGSGQ D+SVE KAMSG Y +IYVCPETV
Sbjct: 213 TGKVVVVISPLISLMHDQCLKLAKHGVSACFLGSGQPDSSVEQKAMSGMYEIIYVCPETV 272

Query: 182 LRLIKPLQRLAENRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRESFRACNLEFLKFDI 3
           LRLIKPLQRLAENRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRE+F AC+L+FL+FDI
Sbjct: 273 LRLIKPLQRLAENRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRENFSACSLKFLEFDI 332


>emb|CBI39502.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score =  312 bits (799), Expect = 3e-83
 Identities = 153/180 (85%), Positives = 164/180 (91%)
 Frame = -3

Query: 542 DIGVHWECRVKNLLQKHFGFSCLKTFQKEALEAWLANEDCLVLAATGSGKSLCFQIPALL 363
           +IG  W  RV +LL KHFG   LK+FQKEAL AWLA++DCLVLAATGSGKSLCFQIPALL
Sbjct: 132 EIGKDWVQRVNSLLHKHFGILSLKSFQKEALSAWLAHQDCLVLAATGSGKSLCFQIPALL 191

Query: 362 TGKVVVVISPLISLMHDQCLKLATHGVSACFLGSGQTDNSVEHKAMSGAYGVIYVCPETV 183
           TGKVVVVISPLISLMHDQCLKLA HGVSACFLGSGQ D+SVE KAMSG Y +IYVCPETV
Sbjct: 192 TGKVVVVISPLISLMHDQCLKLAKHGVSACFLGSGQPDSSVEQKAMSGMYEIIYVCPETV 251

Query: 182 LRLIKPLQRLAENRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRESFRACNLEFLKFDI 3
           LRLIKPLQRLAENRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRE+F AC+L+FL+FDI
Sbjct: 252 LRLIKPLQRLAENRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRENFSACSLKFLEFDI 311


>ref|XP_003555610.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Glycine max]
          Length = 854

 Score =  301 bits (771), Expect = 6e-80
 Identities = 145/180 (80%), Positives = 160/180 (88%)
 Frame = -3

Query: 542 DIGVHWECRVKNLLQKHFGFSCLKTFQKEALEAWLANEDCLVLAATGSGKSLCFQIPALL 363
           DI   WE RV  L+QKHFGFS LKTFQKEAL AWLA++DCLVLAATGSGKSLCFQIPALL
Sbjct: 115 DIAYDWEQRVSLLMQKHFGFSSLKTFQKEALSAWLAHKDCLVLAATGSGKSLCFQIPALL 174

Query: 362 TGKVVVVISPLISLMHDQCLKLATHGVSACFLGSGQTDNSVEHKAMSGAYGVIYVCPETV 183
           +GKVVVVISPLISLMHDQCLKL  HG+SACFLGSGQ D++VE KAM G Y ++Y+CPETV
Sbjct: 175 SGKVVVVISPLISLMHDQCLKLTRHGISACFLGSGQPDDTVEQKAMGGLYSIVYICPETV 234

Query: 182 LRLIKPLQRLAENRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRESFRACNLEFLKFDI 3
           LRLI+PLQ+LAE+ GIALFAIDEVHCVSKWGHDFRPDYRRLSVLRE+F A  L+ LKFDI
Sbjct: 235 LRLIEPLQKLAESHGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRENFSASKLKSLKFDI 294


>ref|XP_002512419.1| DNA helicase, putative [Ricinus communis]
           gi|223548380|gb|EEF49871.1| DNA helicase, putative
           [Ricinus communis]
          Length = 803

 Score =  299 bits (766), Expect = 2e-79
 Identities = 144/180 (80%), Positives = 159/180 (88%)
 Frame = -3

Query: 542 DIGVHWECRVKNLLQKHFGFSCLKTFQKEALEAWLANEDCLVLAATGSGKSLCFQIPALL 363
           D+G+ WE R   LL KHFG+  LK+FQKEAL AW+A++DCLVLAATGSGKSLCFQIPALL
Sbjct: 59  DVGLDWESRANGLLHKHFGYLSLKSFQKEALAAWVAHQDCLVLAATGSGKSLCFQIPALL 118

Query: 362 TGKVVVVISPLISLMHDQCLKLATHGVSACFLGSGQTDNSVEHKAMSGAYGVIYVCPETV 183
           TGKVVVVISPLISLMHDQCLKL+ HG+SACFLGSGQ D++VE KAM G Y +IYVCPETV
Sbjct: 119 TGKVVVVISPLISLMHDQCLKLSRHGISACFLGSGQPDSAVEKKAMRGMYDIIYVCPETV 178

Query: 182 LRLIKPLQRLAENRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRESFRACNLEFLKFDI 3
            RLIKPLQ LAE+RGIALFAIDEVHCVSKWGHDFRPDYRRLSVLR++F   NL FLKFDI
Sbjct: 179 FRLIKPLQGLAESRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRKNFSIGNLPFLKFDI 238


>ref|XP_004167539.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
           SIM-like [Cucumis sativus]
          Length = 821

 Score =  295 bits (756), Expect = 3e-78
 Identities = 146/198 (73%), Positives = 168/198 (84%), Gaps = 1/198 (0%)
 Frame = -3

Query: 593 KYLQSSNASKRIKTALE-DIGVHWECRVKNLLQKHFGFSCLKTFQKEALEAWLANEDCLV 417
           + LQ+ + S  I    E D  + WE ++  +L+KHFG+  LK FQKEALEAWL ++DCLV
Sbjct: 62  RVLQNESDSYLIDGPQEPDTLLDWEKKLNRVLKKHFGYPFLKKFQKEALEAWLNHQDCLV 121

Query: 416 LAATGSGKSLCFQIPALLTGKVVVVISPLISLMHDQCLKLATHGVSACFLGSGQTDNSVE 237
           LAATGSGKS+CFQIPALLTGKVVVVISPLISLMHDQCLKLA HGVSACFLGSGQ D+SVE
Sbjct: 122 LAATGSGKSICFQIPALLTGKVVVVISPLISLMHDQCLKLAKHGVSACFLGSGQPDSSVE 181

Query: 236 HKAMSGAYGVIYVCPETVLRLIKPLQRLAENRGIALFAIDEVHCVSKWGHDFRPDYRRLS 57
            KAM GAY +IYVCPETVLRLI+PLQ+LAE RGIALFAIDEVHCVSKWGHDFRPDYRRLS
Sbjct: 182 KKAMGGAYSIIYVCPETVLRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPDYRRLS 241

Query: 56  VLRESFRACNLEFLKFDI 3
           +LRE+F +  L FLK+++
Sbjct: 242 ILRENFSSSTLNFLKYNV 259


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