BLASTX nr result

ID: Coptis25_contig00034215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034215
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284127.1| PREDICTED: uncharacterized protein ycf36 [Vi...    96   1e-17
ref|XP_002304310.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
ref|NP_201538.1| uncharacterized protein [Arabidopsis thaliana] ...    91   2e-16
ref|XP_003597115.1| hypothetical protein MTR_2g089840 [Medicago ...    91   3e-16
ref|XP_003597114.1| hypothetical protein MTR_2g089840 [Medicago ...    91   3e-16

>ref|XP_002284127.1| PREDICTED: uncharacterized protein ycf36 [Vitis vinifera]
           gi|147834799|emb|CAN75014.1| hypothetical protein
           VITISV_039949 [Vitis vinifera]
           gi|296087349|emb|CBI33723.3| unnamed protein product
           [Vitis vinifera]
          Length = 309

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 51/73 (69%), Positives = 57/73 (78%)
 Frame = +3

Query: 471 VKPVIKLLKQTLVGTGALLVTAVFLFIFATPVENFFQSISARLMNQENVPTSTSSAKSNL 650
           VKPVIKLLKQTLVGTG LLVTAV LFIFATPVE+F ++  A      NVPTS  S K N+
Sbjct: 196 VKPVIKLLKQTLVGTGVLLVTAVTLFIFATPVEDFLRTSFATKETLSNVPTSNISTKFNI 255

Query: 651 RKEELLRLPKDVM 689
           RKE+LLRLP +VM
Sbjct: 256 RKEDLLRLPVEVM 268


>ref|XP_002304310.1| predicted protein [Populus trichocarpa] gi|222841742|gb|EEE79289.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 50/73 (68%), Positives = 57/73 (78%)
 Frame = +3

Query: 471 VKPVIKLLKQTLVGTGALLVTAVFLFIFATPVENFFQSISARLMNQENVPTSTSSAKSNL 650
           VKPVIK+LKQTLVGTGALLVTAV LFIFATPVE+FFQ+  A   N    P S  + K N+
Sbjct: 197 VKPVIKMLKQTLVGTGALLVTAVMLFIFATPVEDFFQTTFATKENPSIDPASGKNTKYNV 256

Query: 651 RKEELLRLPKDVM 689
           RKEELLRLP +V+
Sbjct: 257 RKEELLRLPVEVI 269


>ref|NP_201538.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13430430|gb|AAK25837.1|AF360127_1 unknown protein
           [Arabidopsis thaliana] gi|9758436|dbj|BAB09022.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|15293189|gb|AAK93705.1| unknown protein [Arabidopsis
           thaliana] gi|332010950|gb|AED98333.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 327

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 46/73 (63%), Positives = 57/73 (78%)
 Frame = +3

Query: 471 VKPVIKLLKQTLVGTGALLVTAVFLFIFATPVENFFQSISARLMNQENVPTSTSSAKSNL 650
           VKPVIK+LKQTL+GTGALLV+A  LF+FATPVE+FF++      NQ  V  S +S K N+
Sbjct: 214 VKPVIKMLKQTLIGTGALLVSAFVLFVFATPVEDFFKTTLGSTENQPEVSISRTSNKFNI 273

Query: 651 RKEELLRLPKDVM 689
           RKE+LLRLP DV+
Sbjct: 274 RKEQLLRLPVDVV 286


>ref|XP_003597115.1| hypothetical protein MTR_2g089840 [Medicago truncatula]
           gi|355486163|gb|AES67366.1| hypothetical protein
           MTR_2g089840 [Medicago truncatula]
          Length = 225

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 48/72 (66%), Positives = 52/72 (72%)
 Frame = +3

Query: 471 VKPVIKLLKQTLVGTGALLVTAVFLFIFATPVENFFQSISARLMNQENVPTSTSSAKSNL 650
           VKPV+KLLKQTLVGTGALLVT V LFIFATPVENF  S      N+  V     + K NL
Sbjct: 112 VKPVVKLLKQTLVGTGALLVTGVMLFIFATPVENFLHSTFTTEENKSTVQVPKVNTKYNL 171

Query: 651 RKEELLRLPKDV 686
           RKEELL+LP DV
Sbjct: 172 RKEELLKLPADV 183


>ref|XP_003597114.1| hypothetical protein MTR_2g089840 [Medicago truncatula]
           gi|357482685|ref|XP_003611629.1| hypothetical protein
           MTR_5g016100 [Medicago truncatula]
           gi|355486162|gb|AES67365.1| hypothetical protein
           MTR_2g089840 [Medicago truncatula]
           gi|355512964|gb|AES94587.1| hypothetical protein
           MTR_5g016100 [Medicago truncatula]
           gi|388506430|gb|AFK41281.1| unknown [Medicago
           truncatula]
          Length = 312

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 48/72 (66%), Positives = 52/72 (72%)
 Frame = +3

Query: 471 VKPVIKLLKQTLVGTGALLVTAVFLFIFATPVENFFQSISARLMNQENVPTSTSSAKSNL 650
           VKPV+KLLKQTLVGTGALLVT V LFIFATPVENF  S      N+  V     + K NL
Sbjct: 199 VKPVVKLLKQTLVGTGALLVTGVMLFIFATPVENFLHSTFTTEENKSTVQVPKVNTKYNL 258

Query: 651 RKEELLRLPKDV 686
           RKEELL+LP DV
Sbjct: 259 RKEELLKLPADV 270


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