BLASTX nr result

ID: Coptis25_contig00034198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034198
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21348.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_002509512.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
ref|XP_002298629.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_003548519.1| PREDICTED: uncharacterized protein LOC100813...   100   2e-19
ref|XP_002967167.1| hypothetical protein SELMODRAFT_86596 [Selag...    82   3e-14

>emb|CBI21348.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  142 bits (359), Expect = 2e-32
 Identities = 72/117 (61%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   FVGGLVQYKEVKHTGKSESCHSKLLALLFFGRPTKGRWFLREGT-SSFLLRFGFLFEDRK 178
           F G   QYKEV+HTG  E      L +   GR T G+WF REG  S+FL RFG LFE RK
Sbjct: 106 FSGSFAQYKEVRHTGTKEEGWCSKLWVSIAGRSTTGKWFYREGLPSTFLQRFGILFESRK 165

Query: 179 GPPVFVLVDKNDPTRVPKWIDSGQSGIGRMRALNFYDGNEETQISMSKKLLGCARSA 349
           GPP+ VLVD+ND + +PKW +SGQSGIGRMRAL+  D NEET+I MSK+LLGCARS+
Sbjct: 166 GPPLLVLVDQNDLSSLPKWTESGQSGIGRMRALSSDDSNEETKIPMSKRLLGCARSS 222


>ref|XP_002509512.1| conserved hypothetical protein [Ricinus communis]
            gi|223549411|gb|EEF50899.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1095

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/106 (54%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
 Frame = +2

Query: 35   KHTGKSESCHSKLLALLFFGRPTKGRWFLREGT-SSFLLRFGFLFEDRKGPPVFVLVDKN 211
            +H   +ES ++KL  L F GRP  G+WF  EG  SSFL RFG LFEDRKGPP++V VD+N
Sbjct: 709  RHVDITESWYTKLW-LFFIGRPVFGKWFFGEGLPSSFLPRFGILFEDRKGPPLYVFVDQN 767

Query: 212  DPTRVPKWIDSGQSGIGRMRALNFYDGNEETQISMSKKLLGCARSA 349
            DP+   KW  SGQ+GIGRMRAL+  + NEE +  +++++LGC RS+
Sbjct: 768  DPSTRLKWTGSGQTGIGRMRALSSDESNEEIKTPLARRILGCVRSS 813


>ref|XP_002298629.1| predicted protein [Populus trichocarpa] gi|222845887|gb|EEE83434.1|
            predicted protein [Populus trichocarpa]
          Length = 1156

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/117 (48%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2    FVGGLVQYKEVKHTGKSESCHSKLLALLFFGRPTKGRWFLREGTSSFLL-RFGFLFEDRK 178
            F G    YKE++     +  + KL ++ F G+   G+WF +EG  + LL RFG LFE+ +
Sbjct: 764  FSGSFALYKEIRDIAVGDPWYKKLWSV-FVGKQVIGKWFYKEGLPTSLLPRFGILFENLR 822

Query: 179  GPPVFVLVDKNDPTRVPKWIDSGQSGIGRMRALNFYDGNEETQISMSKKLLGCARSA 349
            GPP+FV+VD  DP  +P WI+SGQSGIGRMRA++  D NEET++  S++L+GCARS+
Sbjct: 823  GPPLFVIVDHCDPNTLPTWIESGQSGIGRMRAVSSDDSNEETKMPWSRRLVGCARSS 879


>ref|XP_003548519.1| PREDICTED: uncharacterized protein LOC100813171 [Glycine max]
          Length = 947

 Score =  100 bits (248), Expect = 2e-19
 Identities = 52/118 (44%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
 Frame = +2

Query: 2   FVGGLVQYKEVKHTGKSESCHSKLLALLFFGRPTKGRWFLREGT-SSFLLRFGFLFEDRK 178
           + G   QYKE       E  ++KL    F GRP  G+WF +EG  SSFL RFG LF++ K
Sbjct: 548 YTGSFAQYKEFNKITNEEKWYTKLW-FFFIGRPMNGKWFNKEGLPSSFLSRFGILFDNWK 606

Query: 179 GPPVFVLVDKNDPTR-VPKWIDSGQSGIGRMRALNFYDGNEETQISMSKKLLGCARSA 349
           GPPV +L D+N+    + KW +S +SGI R +  +  D NEET+IS  K++ GC R++
Sbjct: 607 GPPVLILGDQNEQNNTITKWSESDKSGIRRTKTASSEDSNEETKISTFKRVFGCIRAS 664


>ref|XP_002967167.1| hypothetical protein SELMODRAFT_86596 [Selaginella moellendorffii]
           gi|300165158|gb|EFJ31766.1| hypothetical protein
           SELMODRAFT_86596 [Selaginella moellendorffii]
          Length = 760

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
 Frame = +2

Query: 8   GGLVQYKEVKHTGKSESCHSKLLALLFFGRPTKGRWFLREG-TSSFLLRFGFLFEDRKGP 184
           G LVQYKE +       C   +  LL  G    G+W  +EG +SSF+ +FG LFE+RKGP
Sbjct: 353 GALVQYKEYRSQAGGHVCRGVVRLLL--GESHIGKWVRKEGLSSSFIPKFGLLFENRKGP 410

Query: 185 PVFVLVDKNDPTRVPKWIDSGQSGIGRMRALNFYDGNEETQISMSKKLLGCAR 343
           P  V VD++  +   KW+DS   GIGRM+ +N  + + +  +S + KL+G AR
Sbjct: 411 PRVVYVDEDYGS---KWVDSEGKGIGRMKPVNSDEDSVDMSVSKAHKLIGAAR 460


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