BLASTX nr result

ID: Coptis25_contig00034183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034183
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                107   1e-21
emb|CAN59941.1| hypothetical protein VITISV_017227 [Vitis vinifera]    99   4e-19
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]    98   6e-19
emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]    92   4e-17
emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]    92   4e-17

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  107 bits (267), Expect = 1e-21
 Identities = 60/119 (50%), Positives = 78/119 (65%), Gaps = 4/119 (3%)
 Frame = -1

Query: 346  PPL----HTMQTRAKVGIHKPISKLPVNKVFTYSTSKHKLPTALASKLESSIQVPTCYSQ 179
            PP+    HTM TRAK GIHKP       KVFT   +KH+LP+ + S L +    P+ + Q
Sbjct: 1105 PPIPVNTHTMITRAKAGIHKP-------KVFT--ATKHQLPSTVDS-LTALPPTPSTFLQ 1154

Query: 178  AVKTKEWREAMQSEYNALLQTQTWTLVPYHPSPHIVKHKWVFRLKHKPDGSIDKHKARL 2
            A K+  W EAMQ E+ AL  T TW LVP H + +IV  KWVF++KHKPDG+I+++KARL
Sbjct: 1155 ASKSSHWMEAMQFEFQALQSTGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARL 1213


>emb|CAN59941.1| hypothetical protein VITISV_017227 [Vitis vinifera]
          Length = 479

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 51/115 (44%), Positives = 70/115 (60%)
 Frame = -1

Query: 346 PPLHTMQTRAKVGIHKPISKLPVNKVFTYSTSKHKLPTALASKLESSIQVPTCYSQAVKT 167
           P LH M T +KVG  KP  KL  + +           T L++ +  S Q+PT  SQA+K 
Sbjct: 106 PSLHPMTTXSKVGTIKP--KLLPDHI-----------TYLSTSVSPSDQLPTIVSQALKN 152

Query: 166 KEWREAMQSEYNALLQTQTWTLVPYHPSPHIVKHKWVFRLKHKPDGSIDKHKARL 2
             W  AM  EY AL+Q  TWTLVP+HPS +++  KW+FR+K+  DG+I ++KARL
Sbjct: 153 PNWHTAMVEEYQALVQNNTWTLVPFHPSMNVIXSKWIFRVKYNSDGTIQRYKARL 207


>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
          Length = 1002

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/115 (43%), Positives = 70/115 (60%)
 Frame = -1

Query: 346 PPLHTMQTRAKVGIHKPISKLPVNKVFTYSTSKHKLPTALASKLESSIQVPTCYSQAVKT 167
           P LH M TR+KVG  KP  KL  + +           T L++ +  S Q+PT  SQA+K 
Sbjct: 455 PSLHPMTTRSKVGTIKP--KLLPDHI-----------TYLSTSVSPSDQLPTTVSQALKN 501

Query: 166 KEWREAMQSEYNALLQTQTWTLVPYHPSPHIVKHKWVFRLKHKPDGSIDKHKARL 2
             W   M  EY AL++  TWTLVP+HPS +++  KW+FR+K+  DG+I ++KARL
Sbjct: 502 PNWHTTMVEEYQALVRNNTWTLVPFHPSMNVIDSKWIFRVKYNSDGTIQRYKARL 556


>emb|CAN66863.1| hypothetical protein VITISV_013500 [Vitis vinifera]
          Length = 1112

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
 Frame = -1

Query: 352 NQPP-----LHTMQTRAKVGIHKPISKLPVNKVFTYSTSKHKLPTALASKLESSIQVPTC 188
           NQPP      H + TR+K  IHKPI K                   L + L+     PT 
Sbjct: 578 NQPPDLSPSPHVIVTRSKHNIHKPIQKXN-----------------LTAXLQQPTLEPTT 620

Query: 187 YSQAVKTKEWREAMQSEYNALLQTQTWTLVPYHPSPHIVKHKWVFRLKHKPDGSIDKHKA 8
            +QA+K  +WR+AM +E++ALL+  TW LVP HP  ++   KW+FR K+ P+GSID++KA
Sbjct: 621 VTQALKDPKWRQAMSAEFDALLRNGTWDLVPSHPXQNLXGCKWIFRTKYLPNGSIDRYKA 680

Query: 7   RL 2
           RL
Sbjct: 681 RL 682


>emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]
          Length = 1270

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/112 (44%), Positives = 64/112 (57%)
 Frame = -1

Query: 337  HTMQTRAKVGIHKPISKLPVNKVFTYSTSKHKLPTALASKLESSIQVPTCYSQAVKTKEW 158
            H M TRAK GIHK        K F   T+                  P  YSQA K++ W
Sbjct: 734  HPMVTRAKSGIHK-------KKSFLMQTTSE----------------PHTYSQAFKSEPW 770

Query: 157  REAMQSEYNALLQTQTWTLVPYHPSPHIVKHKWVFRLKHKPDGSIDKHKARL 2
             +AMQ EY ALL+  TW+LVP  PS HIV  +W+++LK+ P+GS++KHKARL
Sbjct: 771  VQAMQHEYQALLRNHTWSLVPPPPSAHIVGCRWIYKLKYLPNGSVEKHKARL 822


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