BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034165
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containi...    72   5e-11
ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containi...    72   5e-11
ref|XP_002324003.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002521455.1| pentatricopeptide repeat-containing protein,...    60   2e-07
emb|CBI15512.3| unnamed protein product [Vitis vinifera]               58   9e-07

>ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 636

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/58 (53%), Positives = 46/58 (79%)
 Frame = -2

Query: 175 TLDLYKVLINSLCKLHRSVEGECMMKELVGANLVPDYDICKALVNGYCKERSFHNAES 2
           T D YK LI+ +C+++RSV+GE +M E+V + ++PD++IC+ALVNGYCKE +   AES
Sbjct: 504 TTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAES 561


>ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 632

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/58 (53%), Positives = 46/58 (79%)
 Frame = -2

Query: 175 TLDLYKVLINSLCKLHRSVEGECMMKELVGANLVPDYDICKALVNGYCKERSFHNAES 2
           T D YK LI+ +C+++RSV+GE +M E+V + ++PD++IC+ALVNGYCKE +   AES
Sbjct: 500 TTDTYKSLIHCMCEINRSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAES 557


>ref|XP_002324003.1| predicted protein [Populus trichocarpa] gi|222867005|gb|EEF04136.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/54 (46%), Positives = 39/54 (72%)
 Frame = -2

Query: 163 YKVLINSLCKLHRSVEGECMMKELVGANLVPDYDICKALVNGYCKERSFHNAES 2
           YK LI  LC++ RS+E E +M+E++   L PD +IC+A+++GYC+E+    AES
Sbjct: 500 YKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAES 553


>ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539354|gb|EEF40945.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 623

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/54 (48%), Positives = 39/54 (72%)
 Frame = -2

Query: 163 YKVLINSLCKLHRSVEGECMMKELVGANLVPDYDICKALVNGYCKERSFHNAES 2
           YK LI  LC+  RS+E E +M+E++ + ++PD DIC+AL++ YCKER    AE+
Sbjct: 497 YKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAET 550


>emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/57 (43%), Positives = 38/57 (66%)
 Frame = -2

Query: 172 LDLYKVLINSLCKLHRSVEGECMMKELVGANLVPDYDICKALVNGYCKERSFHNAES 2
           L  Y+ +I  L +L RS+EGE ++ E+V + ++PD +IC+AL  GYC+E     AES
Sbjct: 503 LATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAES 559