BLASTX nr result
ID: Coptis25_contig00034154
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00034154 (480 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCH50966.1| T4.5 [Malus x robusta] 83 3e-14 emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera] 71 6e-13 ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2... 78 8e-13 emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697... 69 4e-12 ref|XP_002324404.1| predicted protein [Populus trichocarpa] gi|2... 71 4e-12 >emb|CCH50966.1| T4.5 [Malus x robusta] Length = 1670 Score = 82.8 bits (203), Expect = 3e-14 Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 3/109 (2%) Frame = +1 Query: 4 TI*TTN---FISIKLTKDNYILWKSLFIQVLSSFDMFGFIDGSNACPDKYIETTEENTTT 174 TI TN + KL + NYI W+SLFI VL F + G ++G + CP ++ + + T Sbjct: 264 TISITNVAGMVPTKLNRQNYITWRSLFIPVLKRFKLIGLVNGEDLCPPPFVR---DPSGT 320 Query: 175 RVLNDKFLDWKNRD*QVLIWLNATISELLLPCVVGVASSFELWSVLEKR 321 V N F W RD ++IW+N+T+S+ LLP +G+ S LW LE+R Sbjct: 321 CVPNASFETWCERDQILMIWINSTLSKDLLPLTIGMEDSRSLWQSLERR 369 >emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera] Length = 787 Score = 71.2 bits (173), Expect(2) = 6e-13 Identities = 35/99 (35%), Positives = 62/99 (62%) Frame = +1 Query: 19 NFISIKLTKDNYILWKSLFIQVLSSFDMFGFIDGSNACPDKYIETTEENTTTRVLNDKFL 198 + I+IKL+ NY+LWKS + +L S D+ G++DG+ P ++ E T+ L+ K+L Sbjct: 16 HMITIKLSSSNYLLWKSQLLPLLESQDLLGYVDGTLVPPPRF-----EPATSTTLSTKYL 70 Query: 199 DWKNRD*QVLIWLNATISELLLPCVVGVASSFELWSVLE 315 WK D ++L L ++++E + VVG++++ E+W LE Sbjct: 71 AWKAADQRLLCLLLSSLTEEAIAAVVGLSTAREVWLALE 109 Score = 27.3 bits (59), Expect(2) = 6e-13 Identities = 11/36 (30%), Positives = 23/36 (63%) Frame = +2 Query: 341 TRSHMLQLKNTLQNIKKGSHAMVKYLQIIEETCDLL 448 +++ L+LK+ LQ +K+G+ + +Y + + CD L Sbjct: 116 SKARELRLKDDLQLMKRGTKPVAEYARTFKTLCDQL 151 >ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1| predicted protein [Populus trichocarpa] Length = 231 Score = 77.8 bits (190), Expect = 8e-13 Identities = 37/102 (36%), Positives = 59/102 (57%) Frame = +1 Query: 16 TNFISIKLTKDNYILWKSLFIQVLSSFDMFGFIDGSNACPDKYIETTEENTTTRVLNDKF 195 + F+SIKL + NY LW + + +L S ++ GF+ G+N CP ++ T+ TT V + ++ Sbjct: 16 SGFMSIKLDRTNYPLWLAQIVPILKSKNLMGFVTGTNPCPPEFKSNTDGTITTEV-DPRY 74 Query: 196 LDWKNRD*QVLIWLNATISELLLPCVVGVASSFELWSVLEKR 321 W +D +L W+N ++S +L V SS WS LEKR Sbjct: 75 ATWHQQDQMILSWINNSLSPTVLSTVARFTSSQATWSSLEKR 116 >emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1| putative protein [Arabidopsis thaliana] Length = 1415 Score = 68.9 bits (167), Expect(2) = 4e-12 Identities = 33/102 (32%), Positives = 57/102 (55%) Frame = +1 Query: 16 TNFISIKLTKDNYILWKSLFIQVLSSFDMFGFIDGSNACPDKYIETTEENTTTRVLNDKF 195 ++++++KL+ NY+LWK F L++ + GF+ G+N CP+ + T N F Sbjct: 14 SHYVTLKLSTANYLLWKIQFETWLNNQRLLGFVTGANPCPNATRSIRNGDQVTEATNPDF 73 Query: 196 LDWKNRD*QVLIWLNATISELLLPCVVGVASSFELWSVLEKR 321 L W D +++ WL ++SE L V G+ +S E+W L K+ Sbjct: 74 LTWVQNDQKIMGWLLGSLSEDALRSVYGLHTSREVWFSLAKK 115 Score = 26.9 bits (58), Expect(2) = 4e-12 Identities = 11/37 (29%), Positives = 20/37 (54%) Frame = +2 Query: 338 VTRSHMLQLKNTLQNIKKGSHAMVKYLQIIEETCDLL 448 V+ S L+ L + K +M++YL +++ CD L Sbjct: 119 VSASRKSDLQRRLNPVSKNEKSMLEYLNCVKQICDQL 155 >ref|XP_002324404.1| predicted protein [Populus trichocarpa] gi|222865838|gb|EEF02969.1| predicted protein [Populus trichocarpa] Length = 344 Score = 70.9 bits (172), Expect(2) = 4e-12 Identities = 35/100 (35%), Positives = 55/100 (55%) Frame = +1 Query: 16 TNFISIKLTKDNYILWKSLFIQVLSSFDMFGFIDGSNACPDKYIETTEENTTTRVLNDKF 195 TNF +KLT+DNY LW + L ++FG++D S P + +T + TT N F Sbjct: 19 TNFNPVKLTRDNYPLWLPQIVPHLRGRNLFGYVDDSTPPPPSTVSSTIDGVTTTSPNPVF 78 Query: 196 LDWKNRD*QVLIWLNATISELLLPCVVGVASSFELWSVLE 315 L W +D +L +N+T++E +L V+ +S W+ LE Sbjct: 79 LHWTKQDQIILGAINSTLTEKMLTHVIRCTTSISAWTTLE 118 Score = 25.0 bits (53), Expect(2) = 4e-12 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = +2 Query: 341 TRSHMLQLKNTLQNIKKGSHAMVKYLQIIEETCDLLA 451 +R+ +Q+ L +KKGS ++ Y Q + D LA Sbjct: 125 SRARTMQVHYQLTILKKGSSSVADYFQRFQSLTDSLA 161