BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034152
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana] ...   121   7e-26
ref|NP_001189950.1| uncharacterized protein [Arabidopsis thalian...   121   7e-26
emb|CBI26289.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25

>ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|222863715|gb|EEF00846.1|
           predicted protein [Populus trichocarpa]
          Length = 845

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/81 (72%), Positives = 73/81 (90%)
 Frame = +2

Query: 2   TALVNMYARCGDPQSSMQVFHKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVK 181
           TALV+M+ARCGDPQS+MQVF+KM ++DVSAWTA+IGAMAMEG+G  AI LFDEM++QG+K
Sbjct: 512 TALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIK 571

Query: 182 PDGVAFLGVLTACSHSGLVEE 244
           PDGV F+ +LTA SH GLVE+
Sbjct: 572 PDGVVFVALLTALSHGGLVEQ 592



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/73 (38%), Positives = 49/73 (67%)
 Frame = +2

Query: 5   ALVNMYARCGDPQSSMQVFHKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKP 184
           +L++ Y  CG+     +VF KM E++V +WT+ IG  A  G  ++A+ LF EM++ G++P
Sbjct: 179 SLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRP 238

Query: 185 DGVAFLGVLTACS 223
           + V  +GV++AC+
Sbjct: 239 NSVTMVGVISACA 251



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/79 (32%), Positives = 46/79 (58%)
 Frame = +2

Query: 5   ALVNMYARCGDPQSSMQVFHKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKP 184
           +L+  + R GD +S+ ++F  M + D+ +W   IGA+  E   ++AI LF  M  +G+  
Sbjct: 412 SLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITA 471

Query: 185 DGVAFLGVLTACSHSGLVE 241
           D V  +GV +AC + G ++
Sbjct: 472 DKVTMVGVASACGYLGALD 490


>ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332643144|gb|AEE76665.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 938

 Score =  121 bits (303), Expect = 7e-26
 Identities = 53/81 (65%), Positives = 71/81 (87%)
 Frame = +2

Query: 2   TALVNMYARCGDPQSSMQVFHKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVK 181
           T LV+M++RCGDP+S+M +F+ +  +DVSAWTA+IGAMAM G+ E+AI LFD+MI+QG+K
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK 568

Query: 182 PDGVAFLGVLTACSHSGLVEE 244
           PDGVAF+G LTACSH GLV++
Sbjct: 569 PDGVAFVGALTACSHGGLVQQ 589


>ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g22690 gi|9279687|dbj|BAB01244.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332643145|gb|AEE76666.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 842

 Score =  121 bits (303), Expect = 7e-26
 Identities = 53/81 (65%), Positives = 71/81 (87%)
 Frame = +2

Query: 2   TALVNMYARCGDPQSSMQVFHKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVK 181
           T LV+M++RCGDP+S+M +F+ +  +DVSAWTA+IGAMAM G+ E+AI LFD+MI+QG+K
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK 568

Query: 182 PDGVAFLGVLTACSHSGLVEE 244
           PDGVAF+G LTACSH GLV++
Sbjct: 569 PDGVAFVGALTACSHGGLVQQ 589


>emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/81 (71%), Positives = 70/81 (86%)
 Frame = +2

Query: 2   TALVNMYARCGDPQSSMQVFHKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVK 181
           TALV+M+ARCGDPQS+MQVF+KM E+DVSAWTA+IG MAMEG+GE A  LF++M+ QGVK
Sbjct: 336 TALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVK 395

Query: 182 PDGVAFLGVLTACSHSGLVEE 244
           PD V F+ VLTACSH G VE+
Sbjct: 396 PDVVLFVQVLTACSHGGQVEQ 416


>ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/81 (71%), Positives = 70/81 (86%)
 Frame = +2

Query: 2   TALVNMYARCGDPQSSMQVFHKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVK 181
           TALV+M+ARCGDPQS+MQVF+KM E+DVSAWTA+IG MAMEG+GE A  LF++M+ QGVK
Sbjct: 504 TALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVK 563

Query: 182 PDGVAFLGVLTACSHSGLVEE 244
           PD V F+ VLTACSH G VE+
Sbjct: 564 PDVVLFVQVLTACSHGGQVEQ 584



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/72 (34%), Positives = 43/72 (59%)
 Frame = +2

Query: 8   LVNMYARCGDPQSSMQVFHKMREKDVSAWTASIGAMAMEGSGEKAIILFDEMIKQGVKPD 187
           L++ YA CG      +VF  M E++V +WT+ I   A     ++A+ LF EM++ G++P 
Sbjct: 172 LIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPS 231

Query: 188 GVAFLGVLTACS 223
            V  + V++AC+
Sbjct: 232 SVTMVCVISACA 243