BLASTX nr result

ID: Coptis25_contig00034137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00034137
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297853.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_002321717.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
gb|ABK93232.1| unknown [Populus trichocarpa]                          102   4e-20
ref|XP_002514878.1| conserved hypothetical protein [Ricinus comm...    96   2e-18
ref|XP_002318145.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17

>ref|XP_002297853.1| predicted protein [Populus trichocarpa] gi|222845111|gb|EEE82658.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/95 (57%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
 Frame = -1

Query: 284 MDQIKK-EKLQAMNKYKKNQFLNNLLFCSFIALACILFCSSPLWLPPLFSFMKIFLFVHL 108
           MD I+K +K+QAM+ +K NQF  NL+F SF+AL C L CSSPLW P L S MK FLF+ L
Sbjct: 1   MDSIRKAKKIQAMHSFK-NQFYYNLMFHSFLALTCSLLCSSPLWFPSLCSSMKHFLFLSL 59

Query: 107 PSMRTYMLNPKCLFIICNIIVVFLIGESKLVASKA 3
           P+  +    PKCLFI+ N+IVVFL+GES+LV S++
Sbjct: 60  PNKLSSYFGPKCLFILVNVIVVFLVGESRLVGSQS 94


>ref|XP_002321717.1| predicted protein [Populus trichocarpa] gi|222868713|gb|EEF05844.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/94 (50%), Positives = 64/94 (68%)
 Frame = -1

Query: 284 MDQIKKEKLQAMNKYKKNQFLNNLLFCSFIALACILFCSSPLWLPPLFSFMKIFLFVHLP 105
           MD IK  ++ A+NK KK+Q L+N    SF  L+C LFCSSP W P LF  MK+FLFV LP
Sbjct: 1   MDLIKLREIHAINKSKKHQLLDNFFLYSFTVLSCTLFCSSPFWFPSLFHSMKLFLFVSLP 60

Query: 104 SMRTYMLNPKCLFIICNIIVVFLIGESKLVASKA 3
            + + +L+PK +FI+ N+I+  L+GESK   S +
Sbjct: 61  KLSSILLSPKFIFIVGNLIIFVLVGESKYFTSNS 94


>gb|ABK93232.1| unknown [Populus trichocarpa]
          Length = 203

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/94 (50%), Positives = 64/94 (68%)
 Frame = -1

Query: 284 MDQIKKEKLQAMNKYKKNQFLNNLLFCSFIALACILFCSSPLWLPPLFSFMKIFLFVHLP 105
           MD IK  ++ A+NK KK+Q L+N    SF  L+C LFCSSP W P LF  MK+FLFV LP
Sbjct: 1   MDLIKLREIHAINKSKKHQLLDNFFLYSFTVLSCTLFCSSPFWFPSLFHSMKLFLFVSLP 60

Query: 104 SMRTYMLNPKCLFIICNIIVVFLIGESKLVASKA 3
            + + +L+PK +FI+ N+I+  L+GESK   S +
Sbjct: 61  KLSSILLSPKFIFIVGNLIIFVLVGESKYFTSNS 94


>ref|XP_002514878.1| conserved hypothetical protein [Ricinus communis]
           gi|223545929|gb|EEF47432.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 268

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/95 (54%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
 Frame = -1

Query: 284 MDQIKKEK-LQAMNKYKKNQFLNNLLF--CSFIALACILFCSSPLWLPPLFSFMKIFLFV 114
           MD + K K +QAMN YK  QFL+NL+    S IAL C +FC  P W P L+S +K F F+
Sbjct: 1   MDILSKAKNIQAMNSYK-TQFLHNLIIHLLSVIALTCSVFCFYPYWFPSLYSSIKEFQFL 59

Query: 113 HLPSMRTYMLNPKCLFIICNIIVVFLIGESKLVAS 9
            LP+  T + +PKCLF++ NIIVVFL+GESKLV S
Sbjct: 60  SLPNTCTSIFSPKCLFVVVNIIVVFLVGESKLVGS 94


>ref|XP_002318145.1| predicted protein [Populus trichocarpa] gi|222858818|gb|EEE96365.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/94 (46%), Positives = 62/94 (65%)
 Frame = -1

Query: 284 MDQIKKEKLQAMNKYKKNQFLNNLLFCSFIALACILFCSSPLWLPPLFSFMKIFLFVHLP 105
           MD IK  +++A+NK KK+Q L+N    S I LAC LFCSSP W P LF  +K+FLF   P
Sbjct: 1   MDLIKLREIRAVNKSKKHQLLDNFFLYSLIVLACTLFCSSPFWFPCLFDSVKLFLFGSPP 60

Query: 104 SMRTYMLNPKCLFIICNIIVVFLIGESKLVASKA 3
            + +  L+PK +FI+ N+I+  L+GESK   + +
Sbjct: 61  KLGSVFLSPKFIFIVGNLIIFVLVGESKFFTTNS 94


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